BLASTX nr result
ID: Zingiber24_contig00050348
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00050348
(322 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006858539.1| hypothetical protein AMTR_s00071p00160240 [A... 97 2e-18
ref|YP_006273075.1| polyprotein [Fig badnavirus 1] gi|333493962|... 96 7e-18
ref|YP_003208050.1| putative polyprotein [Pelargonium vein bandi... 96 7e-18
ref|NP_758808.1| polyprotein [Taro bacilliform virus] gi|2581483... 89 5e-16
ref|YP_001293182.1| hypothetical protein LBBV_gp3 [Lucky bamboo ... 89 6e-16
ref|YP_610965.1| hypothetical protein DMV_gp3 [Dracaena mottle v... 89 6e-16
ref|YP_002916056.1| polyprotein [Sweetpotato badnavirus B] gi|23... 87 3e-15
ref|YP_009002585.1| polyprotein [Hibiscus bacilliform virus GD1]... 85 9e-15
gb|AFM82591.1| polyprotein [Cacao swollen shoot virus] 83 3e-14
ref|YP_008567619.1| ORF3 [Piper yellow mottle virus] gi|54035746... 81 1e-13
emb|CAE76628.1| polyprotein [Cacao swollen shoot virus] 81 1e-13
ref|YP_004581512.1| polyprotein [Sweetpotato badnavirus A] gi|22... 80 2e-13
gb|ABI47986.1| ORF3 protein [Dioscorea bacilliform virus] 80 2e-13
emb|CAG70342.1| CP, RT, RNaseH and protease polyprotein [Cacao s... 79 5e-13
emb|CAE81285.1| polyprotein [Cacao swollen shoot virus] 79 5e-13
ref|YP_001036293.1| ORF3 protein [Dioscorea bacilliform virus] g... 79 8e-13
emb|CAE81279.1| polyprotein [Cacao swollen shoot virus] 78 1e-12
ref|NP_041734.1| polyprotein [Cacao swollen shoot virus] gi|3478... 75 7e-12
emb|CAD59232.1| polyprotein [Cacao swollen shoot virus] 75 7e-12
gb|AHG94942.1| ORF3, partial [Dioscorea bacilliform virus] 75 1e-11
>ref|XP_006858539.1| hypothetical protein AMTR_s00071p00160240 [Amborella trichopoda]
gi|548862648|gb|ERN20006.1| hypothetical protein
AMTR_s00071p00160240 [Amborella trichopoda]
Length = 741
Score = 97.4 bits (241), Expect = 2e-18
Identities = 53/106 (50%), Positives = 65/106 (61%)
Frame = +1
Query: 4 YNPPTDAIMGPPQFAPATIKIEPPNVYNDPDYYKAKVGRQRKANNNENWTLPSVQRQTGA 183
Y PP + IMGP + PAT+ I+P V + K K + LPS TGA
Sbjct: 296 YRPPAEPIMGPVNYPPATM-IQPFEVGETRERRKGF-----KEFKQPTFDLPSAHAGTGA 349
Query: 184 MLILPDNIGLYHDKISRWESITTNVVDSKIWADNRTKVQYIENLLG 321
MLILPD+IG Y+D ISRWE+IT N+V+ K W DN+TK YIENLLG
Sbjct: 350 MLILPDDIGQYNDTISRWEAITINLVNEKTWYDNKTKAAYIENLLG 395
>ref|YP_006273075.1| polyprotein [Fig badnavirus 1] gi|333493962|gb|AEF56561.1|
polyprotein [Fig badnavirus 1]
Length = 1837
Score = 95.5 bits (236), Expect = 7e-18
Identities = 47/107 (43%), Positives = 68/107 (63%), Gaps = 1/107 (0%)
Frame = +1
Query: 4 YNPPTDAIMGPPQFAPA-TIKIEPPNVYNDPDYYKAKVGRQRKANNNENWTLPSVQRQTG 180
Y PP DA MG P + PA TI + +P + A R + N+E WTLPS Q++ G
Sbjct: 503 YRPPEDAAMGRPSYPPARTIPGGGASSSAEPPRFDAARTRFKGGYNDEMWTLPSAQQKNG 562
Query: 181 AMLILPDNIGLYHDKISRWESITTNVVDSKIWADNRTKVQYIENLLG 321
AM ++P+ +GL++D SRWES+T N V ++ + D R K++Y+ENLLG
Sbjct: 563 AMFVIPEQLGLFNDAFSRWESVTKNHVATQGFTDTRDKIKYMENLLG 609
>ref|YP_003208050.1| putative polyprotein [Pelargonium vein banding virus]
gi|258547408|gb|ACV74337.1| putative polyprotein
[Pelargonium vein banding virus]
Length = 1970
Score = 95.5 bits (236), Expect = 7e-18
Identities = 47/109 (43%), Positives = 66/109 (60%), Gaps = 3/109 (2%)
Frame = +1
Query: 4 YNPPTDAIMGPPQFAPATIK---IEPPNVYNDPDYYKAKVGRQRKANNNENWTLPSVQRQ 174
Y PP D+ MGPP + PA P + + KV R+ + W LPS Q+
Sbjct: 620 YAPPQDSNMGPPTYPPAPTNGASSSRPMPTLGLEGARPKVSDFRRRETSNQWNLPSAQQV 679
Query: 175 TGAMLILPDNIGLYHDKISRWESITTNVVDSKIWADNRTKVQYIENLLG 321
GAML+LP++IGLY + ISRWESIT N+++ + W +N+ +V Y+ENLLG
Sbjct: 680 NGAMLVLPEDIGLYEEVISRWESITINLLNDRTWDNNKARVIYVENLLG 728
>ref|NP_758808.1| polyprotein [Taro bacilliform virus]
gi|25814833|gb|AAN75640.1|AF357836_3 polyprotein [taro
bacilliform virus]
Length = 1881
Score = 89.4 bits (220), Expect = 5e-16
Identities = 44/106 (41%), Positives = 62/106 (58%)
Frame = +1
Query: 4 YNPPTDAIMGPPQFAPATIKIEPPNVYNDPDYYKAKVGRQRKANNNENWTLPSVQRQTGA 183
YNPPT+ +MG + PA+ + + +K + K + LP Q GA
Sbjct: 420 YNPPTEPLMGQVVYPPASAPRPQAETSSTSERFK---NFRAKPYSTPTIFLPPAYNQQGA 476
Query: 184 MLILPDNIGLYHDKISRWESITTNVVDSKIWADNRTKVQYIENLLG 321
+L+LPD+IGLY D ISRWESIT N+++ K+W N K +Y+ENLLG
Sbjct: 477 ILVLPDDIGLYEDTISRWESITLNMMNEKVWPSNEAKAKYMENLLG 522
>ref|YP_001293182.1| hypothetical protein LBBV_gp3 [Lucky bamboo bacilliform virus]
gi|148645292|gb|ABR01170.1| hypothetical protein [Lucky
bamboo bacilliform virus]
Length = 1913
Score = 89.0 bits (219), Expect = 6e-16
Identities = 49/117 (41%), Positives = 71/117 (60%), Gaps = 11/117 (9%)
Frame = +1
Query: 4 YNPPTDAIMGPPQFAPATIK----------IEPPNVYNDPDYYKAKVGRQRKANNNEN-W 150
Y PPTD+ M PP + PA+ + P D +A + R + +N +
Sbjct: 530 YTPPTDSGMAPPGYPPASAGGAASSSQMPILGAPFTAAD---VRANLKNLRGSRSNAGMF 586
Query: 151 TLPSVQRQTGAMLILPDNIGLYHDKISRWESITTNVVDSKIWADNRTKVQYIENLLG 321
LPS Q+ GA+L+LP++IGLY D ISRWE+IT NV+ K+++DNR+K+ Y+ENLLG
Sbjct: 587 QLPSAQQLQGALLVLPEDIGLYQDVISRWETITLNVLADKVFSDNRSKLMYVENLLG 643
>ref|YP_610965.1| hypothetical protein DMV_gp3 [Dracaena mottle virus]
gi|92430216|gb|ABE77344.1| hypothetical protein
[Dracaena mottle virus]
Length = 1916
Score = 89.0 bits (219), Expect = 6e-16
Identities = 49/117 (41%), Positives = 71/117 (60%), Gaps = 11/117 (9%)
Frame = +1
Query: 4 YNPPTDAIMGPPQFAPATIK----------IEPPNVYNDPDYYKAKVGRQRKANNNEN-W 150
Y PPTD+ M PP + PA+ + P D +A + R + +N +
Sbjct: 532 YTPPTDSGMAPPGYPPASAGGAASSSQMPILGAPFTAAD---VRANLKNLRGSRSNAGMF 588
Query: 151 TLPSVQRQTGAMLILPDNIGLYHDKISRWESITTNVVDSKIWADNRTKVQYIENLLG 321
LPS Q+ GA+L+LP++IGLY D ISRWE+IT NV+ K+++DNR+K+ Y+ENLLG
Sbjct: 589 QLPSAQQLRGALLVLPEDIGLYQDVISRWETITLNVLADKVFSDNRSKLMYVENLLG 645
>ref|YP_002916056.1| polyprotein [Sweetpotato badnavirus B] gi|237846579|gb|ACN56750.1|
polyprotein [Sweetpotato badnavirus B]
Length = 1170
Score = 86.7 bits (213), Expect = 3e-15
Identities = 45/110 (40%), Positives = 60/110 (54%), Gaps = 4/110 (3%)
Frame = +1
Query: 4 YNPPTDAIMGPPQFAPATIKIE----PPNVYNDPDYYKAKVGRQRKANNNENWTLPSVQR 171
Y PP D MG P +APA +E PP+ D + K + NNENW+LP Q+
Sbjct: 576 YRPPEDTTMGQPSYAPARPTVETVSGPPSFRTDSRFLK-------RGTNNENWSLPPAQQ 628
Query: 172 QTGAMLILPDNIGLYHDKISRWESITTNVVDSKIWADNRTKVQYIENLLG 321
Q G +L LP+ +GL +D RWE+ T N + D + KV Y+ENLLG
Sbjct: 629 QGGVLLTLPEQMGLLNDVFMRWETTTLNHMSLMNIQDTQEKVDYMENLLG 678
>ref|YP_009002585.1| polyprotein [Hibiscus bacilliform virus GD1]
gi|584388573|gb|AHI90954.1| polyprotein [Hibiscus
bacilliform virus GD1]
Length = 1892
Score = 85.1 bits (209), Expect = 9e-15
Identities = 43/109 (39%), Positives = 66/109 (60%), Gaps = 2/109 (1%)
Frame = +1
Query: 1 TYNPPTDAIMGPPQFAPATIKIEPPNVYNDPDY--YKAKVGRQRKANNNENWTLPSVQRQ 174
+Y PP D M P +APA + E + + P + Y + + ++ + E W P+ Q Q
Sbjct: 527 SYRPPQDTAMTPAGYAPA--RGEASSSTHQPMFEGYMPRRPQFKQDRSTEYWQFPTAQGQ 584
Query: 175 TGAMLILPDNIGLYHDKISRWESITTNVVDSKIWADNRTKVQYIENLLG 321
TGAM ++P IGL+HD +RWESIT N V S+ + D++ K +++ENLLG
Sbjct: 585 TGAMFVIPRQIGLFHDAFNRWESITKNYVASQGFTDSKDKAEFMENLLG 633
>gb|AFM82591.1| polyprotein [Cacao swollen shoot virus]
Length = 1872
Score = 83.2 bits (204), Expect = 3e-14
Identities = 43/110 (39%), Positives = 61/110 (55%), Gaps = 4/110 (3%)
Frame = +1
Query: 4 YNPPTDAIMGPPQFAPATIKIEPPNVYNDPDYYKAKVGRQ----RKANNNENWTLPSVQR 171
Y PP D +M P + PA+ + P Y+ ++ R+ + E W LPS Q
Sbjct: 507 YTPPGDTLMTPVGYPPASSSRSTVTTPSRPPLYEGRIPSASRVLRRDDYTEWWQLPSSQG 566
Query: 172 QTGAMLILPDNIGLYHDKISRWESITTNVVDSKIWADNRTKVQYIENLLG 321
TGA+ ++P IGL+HD SRWESIT N V ++ D K+++IENLLG
Sbjct: 567 TTGALFVMPKQIGLFHDVFSRWESITKNYVSAQGITDPTEKMEFIENLLG 616
>ref|YP_008567619.1| ORF3 [Piper yellow mottle virus] gi|540357465|gb|AGV08293.1| ORF3
[Piper yellow mottle virus]
Length = 1925
Score = 81.3 bits (199), Expect = 1e-13
Identities = 45/114 (39%), Positives = 64/114 (56%), Gaps = 8/114 (7%)
Frame = +1
Query: 4 YNPPTDAIMGPPQFAPATIKIEPPNVYNDPD--------YYKAKVGRQRKANNNENWTLP 159
Y PP D MGP + PA N+ N+ Y K+ V R + + +NWTLP
Sbjct: 583 YRPPQDTAMGPSSYPPAV------NITNEAGPSRPMFEGYNKSGV-RFKHKDLADNWTLP 635
Query: 160 SVQRQTGAMLILPDNIGLYHDKISRWESITTNVVDSKIWADNRTKVQYIENLLG 321
S Q+Q GA+ ++P +GL+ +RWESIT N+V ++ + D KV +IENLLG
Sbjct: 636 SAQQQQGAVFVIPTQLGLFDSVFARWESITKNLVAAQGFTDPADKVDFIENLLG 689
>emb|CAE76628.1| polyprotein [Cacao swollen shoot virus]
Length = 1847
Score = 81.3 bits (199), Expect = 1e-13
Identities = 41/110 (37%), Positives = 62/110 (56%), Gaps = 4/110 (3%)
Frame = +1
Query: 4 YNPPTDAIMGPPQFAPATIKIEPPNVYNDPDYYKAKVGRQ----RKANNNENWTLPSVQR 171
Y PP D +M P + PA+ + P ++ +V ++ + E W LPS Q
Sbjct: 479 YTPPGDTLMTPVGYPPASSSRSTVTTPSRPPLFEGRVTHVPRFLKRDDYTEWWQLPSSQG 538
Query: 172 QTGAMLILPDNIGLYHDKISRWESITTNVVDSKIWADNRTKVQYIENLLG 321
TGA+ ++P IGL+HD SRWESIT N V ++ + D K++++ENLLG
Sbjct: 539 TTGALFVMPKQIGLFHDVFSRWESITKNYVAAQSFTDPTEKMEFMENLLG 588
>ref|YP_004581512.1| polyprotein [Sweetpotato badnavirus A] gi|224566902|gb|ACN56745.1|
polyprotein [Sweetpotato badnavirus A]
Length = 1189
Score = 80.5 bits (197), Expect = 2e-13
Identities = 45/109 (41%), Positives = 59/109 (54%), Gaps = 5/109 (4%)
Frame = +1
Query: 10 PPTDAIMGPPQFAPA----TIKIE-PPNVYNDPDYYKAKVGRQRKANNNENWTLPSVQRQ 174
PP D MG P +APA T +I PP D + K + NNENW+LP Q+Q
Sbjct: 590 PPEDISMGQPSYAPARPGTTTEISGPPTFRTDSRFLK-------RGTNNENWSLPPAQQQ 642
Query: 175 TGAMLILPDNIGLYHDKISRWESITTNVVDSKIWADNRTKVQYIENLLG 321
G +L LP+ +GL +D RWE+ T N + D + KV Y+ENLLG
Sbjct: 643 GGVLLTLPEQMGLLNDVFMRWETTTLNHMSLMNIQDTQEKVDYMENLLG 691
>gb|ABI47986.1| ORF3 protein [Dioscorea bacilliform virus]
Length = 1295
Score = 80.5 bits (197), Expect = 2e-13
Identities = 42/106 (39%), Positives = 55/106 (51%)
Frame = +1
Query: 4 YNPPTDAIMGPPQFAPATIKIEPPNVYNDPDYYKAKVGRQRKANNNENWTLPSVQRQTGA 183
Y PP D M PP + PA I P+ Y+ P Y R + N + N LPS Q+ TGA
Sbjct: 617 YTPPEDTTMNPPTYPPARIDQAGPS-YSGPSYSVPSGTRFKPMNYSANLQLPSAQQTTGA 675
Query: 184 MLILPDNIGLYHDKISRWESITTNVVDSKIWADNRTKVQYIENLLG 321
M +P + + + SRWESIT N+ + R K +IENLLG
Sbjct: 676 MFYMPLELDKFDEVFSRWESITKNITSQHSFISGREKADFIENLLG 721
>emb|CAG70342.1| CP, RT, RNaseH and protease polyprotein [Cacao swollen shoot virus]
Length = 1868
Score = 79.3 bits (194), Expect = 5e-13
Identities = 40/110 (36%), Positives = 61/110 (55%), Gaps = 4/110 (3%)
Frame = +1
Query: 4 YNPPTDAIMGPPQFAPATIKIEPPNVYNDPDYYKAKVGRQ----RKANNNENWTLPSVQR 171
Y PP D +M P + PA+ P Y+ ++ ++ + E W LPS Q
Sbjct: 505 YTPPGDTVMTPVGYPPASSSRSTVTAPTRPPLYEGRMPHAPRFLKRDDYTEWWQLPSSQG 564
Query: 172 QTGAMLILPDNIGLYHDKISRWESITTNVVDSKIWADNRTKVQYIENLLG 321
TGA+ ++P +GL+H+ SRWESIT N V ++ + D K+++IENLLG
Sbjct: 565 TTGALFVMPRQVGLFHEVFSRWESITKNYVAAQGFTDPVEKMEFIENLLG 614
>emb|CAE81285.1| polyprotein [Cacao swollen shoot virus]
Length = 1770
Score = 79.3 bits (194), Expect = 5e-13
Identities = 40/110 (36%), Positives = 62/110 (56%), Gaps = 4/110 (3%)
Frame = +1
Query: 4 YNPPTDAIMGPPQFAPATIKIEPPNVYNDPDYYKAKVGRQ----RKANNNENWTLPSVQR 171
Y PP D +M P + PA+ + P ++ +V ++ + E W LPS Q
Sbjct: 402 YTPPGDTLMTPVGYPPASSSRSTVTTPSRPPLFEGRVTHVPRFLKRDDYTEWWQLPSSQG 461
Query: 172 QTGAMLILPDNIGLYHDKISRWESITTNVVDSKIWADNRTKVQYIENLLG 321
TGA+ ++P +GL+HD SRWESIT N V ++ + D K++++ENLLG
Sbjct: 462 TTGALFVMPKQMGLFHDVFSRWESITKNYVAAQGFTDPTEKMEFMENLLG 511
>ref|YP_001036293.1| ORF3 protein [Dioscorea bacilliform virus]
gi|113901272|gb|ABI47983.1| ORF3 protein [Dioscorea
bacilliform virus]
Length = 1887
Score = 78.6 bits (192), Expect = 8e-13
Identities = 41/106 (38%), Positives = 55/106 (51%)
Frame = +1
Query: 4 YNPPTDAIMGPPQFAPATIKIEPPNVYNDPDYYKAKVGRQRKANNNENWTLPSVQRQTGA 183
Y PP D M PP + PA I P+ ++ P Y R + N + N LPS Q+ TGA
Sbjct: 617 YTPPEDTTMNPPTYPPARIDQAGPS-HSGPSYSVPSGTRFKPMNYSANLQLPSAQQTTGA 675
Query: 184 MLILPDNIGLYHDKISRWESITTNVVDSKIWADNRTKVQYIENLLG 321
M +P + + + SRWESIT N+ + R K +IENLLG
Sbjct: 676 MFYMPLELDKFDEVFSRWESITKNITSQHSFISGREKADFIENLLG 721
>emb|CAE81279.1| polyprotein [Cacao swollen shoot virus]
Length = 1816
Score = 77.8 bits (190), Expect = 1e-12
Identities = 39/110 (35%), Positives = 62/110 (56%), Gaps = 4/110 (3%)
Frame = +1
Query: 4 YNPPTDAIMGPPQFAPATIKIEPPNVYNDPDYYKAKVGRQ----RKANNNENWTLPSVQR 171
Y PP D +M P + PA+ + P ++ +V ++ + E W LPS Q
Sbjct: 478 YTPPGDTLMTPVGYPPASSSRSTVTTPSRPPLFEGRVTHVPRFLKRDDYTEWWQLPSSQG 537
Query: 172 QTGAMLILPDNIGLYHDKISRWESITTNVVDSKIWADNRTKVQYIENLLG 321
TGA+ ++P +GL+H+ SRWESIT N V ++ + D K++++ENLLG
Sbjct: 538 TTGALFVMPKQMGLFHEVFSRWESITKNYVAAQGFTDPTEKMEFMENLLG 587
>ref|NP_041734.1| polyprotein [Cacao swollen shoot virus] gi|347871|gb|AAA03171.1|
polyprotein [Cacao swollen shoot virus]
Length = 1834
Score = 75.5 bits (184), Expect = 7e-12
Identities = 38/110 (34%), Positives = 60/110 (54%), Gaps = 4/110 (3%)
Frame = +1
Query: 4 YNPPTDAIMGPPQFAPATIKIEPPNVYNDPDYYKAKVGRQ----RKANNNENWTLPSVQR 171
Y PP D +M P + PA+ + P ++ + ++ E W LPS Q
Sbjct: 474 YTPPGDTMMTPVGYPPASSSRSTVTTPSRPPLFEGRTTHVPRFLKRDEYTEWWQLPSSQG 533
Query: 172 QTGAMLILPDNIGLYHDKISRWESITTNVVDSKIWADNRTKVQYIENLLG 321
TGA+ ++P +GL+H+ SRWESIT N V ++ + D K++++ENLLG
Sbjct: 534 TTGALFVMPKQMGLFHEVFSRWESITKNYVAAQGFTDPTEKMEFMENLLG 583
>emb|CAD59232.1| polyprotein [Cacao swollen shoot virus]
Length = 1839
Score = 75.5 bits (184), Expect = 7e-12
Identities = 38/110 (34%), Positives = 60/110 (54%), Gaps = 4/110 (3%)
Frame = +1
Query: 4 YNPPTDAIMGPPQFAPATIKIEPPNVYNDPDYYKAKVGRQ----RKANNNENWTLPSVQR 171
Y PP D +M P + PA+ + P ++ + ++ E W LPS Q
Sbjct: 474 YTPPGDTMMTPVGYPPASSSRSTVTTPSRPPLFEGRTTHVPRFLKRDEYTEWWQLPSSQG 533
Query: 172 QTGAMLILPDNIGLYHDKISRWESITTNVVDSKIWADNRTKVQYIENLLG 321
TGA+ ++P +GL+H+ SRWESIT N V ++ + D K++++ENLLG
Sbjct: 534 TTGALFVMPKQMGLFHEVFSRWESITKNYVAAQGFTDPTEKMEFMENLLG 583
>gb|AHG94942.1| ORF3, partial [Dioscorea bacilliform virus]
Length = 1395
Score = 74.7 bits (182), Expect = 1e-11
Identities = 42/118 (35%), Positives = 58/118 (49%), Gaps = 12/118 (10%)
Frame = +1
Query: 4 YNPPTDAIMGPPQFAPATIKIEPPNVYNDPDY---------YKAKVGRQ---RKANNNEN 147
Y PP D M PP + PA I + P Y +V R + + N
Sbjct: 81 YRPPEDTTMNPPTYPPARISGQASTSTGQPSTSYSGQPTSSYSQRVPTGVHFRARDYSNN 140
Query: 148 WTLPSVQRQTGAMLILPDNIGLYHDKISRWESITTNVVDSKIWADNRTKVQYIENLLG 321
W+LPS Q+ TGAM LP + + + SRWESIT N+V + + + K ++IENLLG
Sbjct: 141 WSLPSAQQNTGAMFYLPLELVKFDEVFSRWESITKNLVSQQSFITGKEKAEFIENLLG 198