BLASTX nr result
ID: Zingiber24_contig00050001
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00050001
(271 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003578725.1| PREDICTED: uncharacterized protein LOC100841... 76 4e-12
tpg|DAA38453.1| TPA: putative RING zinc finger domain superfamil... 76 5e-12
tpg|DAA38452.1| TPA: putative RING zinc finger domain superfamil... 76 5e-12
tpg|DAA38449.1| TPA: putative RING zinc finger domain superfamil... 76 5e-12
gb|ACR37994.1| unknown [Zea mays] gi|414587879|tpg|DAA38450.1| T... 76 5e-12
tpg|DAA38451.1| TPA: putative RING zinc finger domain superfamil... 76 5e-12
gb|ACN36616.1| unknown [Zea mays] gi|414591242|tpg|DAA41813.1| T... 76 5e-12
ref|NP_001130111.1| LOC100191204 [Zea mays] gi|194688314|gb|ACF7... 76 5e-12
ref|XP_004962531.1| PREDICTED: uncharacterized protein LOC101763... 73 3e-11
ref|NP_001066541.1| Os12g0267900 [Oryza sativa Japonica Group] g... 73 4e-11
gb|EAY97079.1| hypothetical protein OsI_19001 [Oryza sativa Indi... 73 4e-11
tpg|DAA64226.1| TPA: putative RING zinc finger domain superfamil... 72 6e-11
ref|NP_001130087.1| uncharacterized LOC100191180 [Zea mays] gi|1... 72 6e-11
ref|XP_004514734.1| PREDICTED: uncharacterized protein LOC101503... 71 1e-10
ref|XP_002463433.1| hypothetical protein SORBIDRAFT_02g043730 [S... 70 3e-10
dbj|BAJ92308.1| predicted protein [Hordeum vulgare subsp. vulgare] 69 5e-10
ref|XP_002300081.1| hypothetical protein POPTR_0001s36210g [Popu... 67 2e-09
ref|XP_006664479.1| PREDICTED: postreplication repair E3 ubiquit... 67 3e-09
gb|EMT00993.1| E3 ubiquitin-protein ligase [Aegilops tauschii] 67 3e-09
ref|XP_004159149.1| PREDICTED: uncharacterized protein LOC101225... 66 4e-09
>ref|XP_003578725.1| PREDICTED: uncharacterized protein LOC100841891 [Brachypodium
distachyon]
Length = 398
Score = 76.3 bits (186), Expect = 4e-12
Identities = 46/81 (56%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Frame = -1
Query: 244 ILSPGFRSAAAMAGWDEEALLFATLVVEDTPVRESRQHKHKKRLKSPAXXXXXXXXXXXX 65
+LSP F SAA MAGWDEE+LL A LVVEDTPVRESR +KR SPA
Sbjct: 26 LLSPRFLSAAEMAGWDEESLLLAALVVEDTPVRESR----RKRRPSPAGGSAGSNTRKRR 81
Query: 64 XXXGVP--IPPVVLCLDDEEE 8
P IPPV+L LDDEEE
Sbjct: 82 SRRPPPGEIPPVMLALDDEEE 102
>tpg|DAA38453.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays] gi|414591241|tpg|DAA41812.1| TPA: putative RING
zinc finger domain superfamily protein [Zea mays]
Length = 138
Score = 75.9 bits (185), Expect = 5e-12
Identities = 38/80 (47%), Positives = 49/80 (61%)
Frame = -1
Query: 244 ILSPGFRSAAAMAGWDEEALLFATLVVEDTPVRESRQHKHKKRLKSPAXXXXXXXXXXXX 65
+LSP FRSAAA+AGWDEE++L A +VVEDTPVRESR+ + +
Sbjct: 28 LLSPRFRSAAALAGWDEESVLLAAMVVEDTPVRESRRKRRASTSSAGGSAGSSTRKMRPR 87
Query: 64 XXXGVPIPPVVLCLDDEEED 5
IPPVVL LDD+++D
Sbjct: 88 RQSPAKIPPVVLALDDDDDD 107
>tpg|DAA38452.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 384
Score = 75.9 bits (185), Expect = 5e-12
Identities = 38/80 (47%), Positives = 49/80 (61%)
Frame = -1
Query: 244 ILSPGFRSAAAMAGWDEEALLFATLVVEDTPVRESRQHKHKKRLKSPAXXXXXXXXXXXX 65
+LSP FRSAAA+AGWDEE++L A +VVEDTPVRESR+ + +
Sbjct: 28 LLSPRFRSAAALAGWDEESVLLAAMVVEDTPVRESRRKRRASTSSAGGSAGSSTRKMRPR 87
Query: 64 XXXGVPIPPVVLCLDDEEED 5
IPPVVL LDD+++D
Sbjct: 88 RQSPAKIPPVVLALDDDDDD 107
>tpg|DAA38449.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 389
Score = 75.9 bits (185), Expect = 5e-12
Identities = 38/80 (47%), Positives = 49/80 (61%)
Frame = -1
Query: 244 ILSPGFRSAAAMAGWDEEALLFATLVVEDTPVRESRQHKHKKRLKSPAXXXXXXXXXXXX 65
+LSP FRSAAA+AGWDEE++L A +VVEDTPVRESR+ + +
Sbjct: 28 LLSPRFRSAAALAGWDEESVLLAAMVVEDTPVRESRRKRRASTSSAGGSAGSSTRKMRPR 87
Query: 64 XXXGVPIPPVVLCLDDEEED 5
IPPVVL LDD+++D
Sbjct: 88 RQSPAKIPPVVLALDDDDDD 107
>gb|ACR37994.1| unknown [Zea mays] gi|414587879|tpg|DAA38450.1| TPA: putative RING
zinc finger domain superfamily protein [Zea mays]
gi|414591244|tpg|DAA41815.1| TPA: putative RING zinc
finger domain superfamily protein [Zea mays]
Length = 226
Score = 75.9 bits (185), Expect = 5e-12
Identities = 38/80 (47%), Positives = 49/80 (61%)
Frame = -1
Query: 244 ILSPGFRSAAAMAGWDEEALLFATLVVEDTPVRESRQHKHKKRLKSPAXXXXXXXXXXXX 65
+LSP FRSAAA+AGWDEE++L A +VVEDTPVRESR+ + +
Sbjct: 28 LLSPRFRSAAALAGWDEESVLLAAMVVEDTPVRESRRKRRASTSSAGGSAGSSTRKMRPR 87
Query: 64 XXXGVPIPPVVLCLDDEEED 5
IPPVVL LDD+++D
Sbjct: 88 RQSPAKIPPVVLALDDDDDD 107
>tpg|DAA38451.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays] gi|414591243|tpg|DAA41814.1| TPA: putative RING
zinc finger domain superfamily protein [Zea mays]
Length = 185
Score = 75.9 bits (185), Expect = 5e-12
Identities = 38/80 (47%), Positives = 49/80 (61%)
Frame = -1
Query: 244 ILSPGFRSAAAMAGWDEEALLFATLVVEDTPVRESRQHKHKKRLKSPAXXXXXXXXXXXX 65
+LSP FRSAAA+AGWDEE++L A +VVEDTPVRESR+ + +
Sbjct: 28 LLSPRFRSAAALAGWDEESVLLAAMVVEDTPVRESRRKRRASTSSAGGSAGSSTRKMRPR 87
Query: 64 XXXGVPIPPVVLCLDDEEED 5
IPPVVL LDD+++D
Sbjct: 88 RQSPAKIPPVVLALDDDDDD 107
>gb|ACN36616.1| unknown [Zea mays] gi|414591242|tpg|DAA41813.1| TPA: putative RING
zinc finger domain superfamily protein [Zea mays]
Length = 384
Score = 75.9 bits (185), Expect = 5e-12
Identities = 38/80 (47%), Positives = 49/80 (61%)
Frame = -1
Query: 244 ILSPGFRSAAAMAGWDEEALLFATLVVEDTPVRESRQHKHKKRLKSPAXXXXXXXXXXXX 65
+LSP FRSAAA+AGWDEE++L A +VVEDTPVRESR+ + +
Sbjct: 28 LLSPRFRSAAALAGWDEESVLLAAMVVEDTPVRESRRKRRASTSSAGGSAGSSTRKMRPR 87
Query: 64 XXXGVPIPPVVLCLDDEEED 5
IPPVVL LDD+++D
Sbjct: 88 RQSPAKIPPVVLALDDDDDD 107
>ref|NP_001130111.1| LOC100191204 [Zea mays] gi|194688314|gb|ACF78241.1| unknown [Zea
mays] gi|223946185|gb|ACN27176.1| unknown [Zea mays]
gi|414591245|tpg|DAA41816.1| TPA: putative RING zinc
finger domain superfamily protein [Zea mays]
Length = 389
Score = 75.9 bits (185), Expect = 5e-12
Identities = 38/80 (47%), Positives = 49/80 (61%)
Frame = -1
Query: 244 ILSPGFRSAAAMAGWDEEALLFATLVVEDTPVRESRQHKHKKRLKSPAXXXXXXXXXXXX 65
+LSP FRSAAA+AGWDEE++L A +VVEDTPVRESR+ + +
Sbjct: 28 LLSPRFRSAAALAGWDEESVLLAAMVVEDTPVRESRRKRRASTSSAGGSAGSSTRKMRPR 87
Query: 64 XXXGVPIPPVVLCLDDEEED 5
IPPVVL LDD+++D
Sbjct: 88 RQSPAKIPPVVLALDDDDDD 107
>ref|XP_004962531.1| PREDICTED: uncharacterized protein LOC101763635 [Setaria italica]
Length = 391
Score = 73.2 bits (178), Expect = 3e-11
Identities = 44/90 (48%), Positives = 55/90 (61%), Gaps = 2/90 (2%)
Frame = -1
Query: 271 AAPTTNRSMILSPGFRSAAAMAGWDEEALLFATLVVEDTPVRESRQHKHKKRLKSPAXXX 92
AA + + +LSP FRSAAA+AGWDEE++L A LVVEDTPVRESR+ K + S A
Sbjct: 21 AAAPKDGAGLLSPRFRSAAALAGWDEESVLLAALVVEDTPVRESRR-KRRASTSSSAGGS 79
Query: 91 XXXXXXXXXXXXGVP--IPPVVLCLDDEEE 8
P IPPVVL LDD+++
Sbjct: 80 AGSSTRKRRSRRQSPGKIPPVVLALDDDDK 109
>ref|NP_001066541.1| Os12g0267900 [Oryza sativa Japonica Group]
gi|77554239|gb|ABA97035.1| Zinc finger, C3HC4 type
family protein, expressed [Oryza sativa Japonica Group]
gi|113649048|dbj|BAF29560.1| Os12g0267900 [Oryza sativa
Japonica Group] gi|222630730|gb|EEE62862.1| hypothetical
protein OsJ_17665 [Oryza sativa Japonica Group]
Length = 391
Score = 72.8 bits (177), Expect = 4e-11
Identities = 44/92 (47%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Frame = -1
Query: 271 AAPTTNRSMILSPGFRSAAAMAGWDEEALLFATLVVEDTPVRESRQHKHKKRLKSPA--- 101
AA + S LSP FRSAAA AGWDEE+LL A LVVEDTPVRESR+ + S A
Sbjct: 23 AAAAKDASSFLSPRFRSAAAQAGWDEESLLHAALVVEDTPVRESRRRRRASTTSSSAGGG 82
Query: 100 -XXXXXXXXXXXXXXXGVPIPPVVLCLDDEEE 8
IPPVV LDD+E+
Sbjct: 83 GSAGSNTRKRRSWRQPPGSIPPVVFLLDDDEK 114
>gb|EAY97079.1| hypothetical protein OsI_19001 [Oryza sativa Indica Group]
Length = 391
Score = 72.8 bits (177), Expect = 4e-11
Identities = 44/92 (47%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Frame = -1
Query: 271 AAPTTNRSMILSPGFRSAAAMAGWDEEALLFATLVVEDTPVRESRQHKHKKRLKSPA--- 101
AA + S LSP FRSAAA AGWDEE+LL A LVVEDTPVRESR+ + S A
Sbjct: 23 AAAAKDASSFLSPRFRSAAAQAGWDEESLLHAALVVEDTPVRESRRRRRASTTSSSAGGG 82
Query: 100 -XXXXXXXXXXXXXXXGVPIPPVVLCLDDEEE 8
IPPVV LDD+E+
Sbjct: 83 GSAGSNTRKRRSWRQPPGSIPPVVFLLDDDEK 114
>tpg|DAA64226.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 373
Score = 72.4 bits (176), Expect = 6e-11
Identities = 40/89 (44%), Positives = 51/89 (57%)
Frame = -1
Query: 271 AAPTTNRSMILSPGFRSAAAMAGWDEEALLFATLVVEDTPVRESRQHKHKKRLKSPAXXX 92
AAP N + +LSP FRSAAA+AGWDEE++L A +VV+DTPVR+SR+ +
Sbjct: 20 AAPK-NGADLLSPRFRSAAALAGWDEESVLLAAMVVDDTPVRDSRRKRRASTSSVGGSAG 78
Query: 91 XXXXXXXXXXXXGVPIPPVVLCLDDEEED 5
IPPVV LDDE+ D
Sbjct: 79 SSTRKRRPRRLSPAKIPPVVFALDDEKSD 107
>ref|NP_001130087.1| uncharacterized LOC100191180 [Zea mays] gi|194688258|gb|ACF78213.1|
unknown [Zea mays] gi|195625524|gb|ACG34592.1|
ubiquitin-protein ligase/ zinc ion binding protein [Zea
mays] gi|414888211|tpg|DAA64225.1| TPA: putative RING
zinc finger domain superfamily protein [Zea mays]
Length = 372
Score = 72.4 bits (176), Expect = 6e-11
Identities = 40/89 (44%), Positives = 51/89 (57%)
Frame = -1
Query: 271 AAPTTNRSMILSPGFRSAAAMAGWDEEALLFATLVVEDTPVRESRQHKHKKRLKSPAXXX 92
AAP N + +LSP FRSAAA+AGWDEE++L A +VV+DTPVR+SR+ +
Sbjct: 20 AAPK-NGADLLSPRFRSAAALAGWDEESVLLAAMVVDDTPVRDSRRKRRASTSSVGGSAG 78
Query: 91 XXXXXXXXXXXXGVPIPPVVLCLDDEEED 5
IPPVV LDDE+ D
Sbjct: 79 SSTRKRRPRRLSPAKIPPVVFALDDEKSD 107
>ref|XP_004514734.1| PREDICTED: uncharacterized protein LOC101503825 [Cicer arietinum]
Length = 378
Score = 71.2 bits (173), Expect = 1e-10
Identities = 44/86 (51%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Frame = -1
Query: 256 NRSMILSPGFRSAAAMAGWDEEALLFATLVVEDTPVRESRQHKHKKRL----KSPAXXXX 89
N + ++SP F+SAAAMAGWDEEALL ATL+VEDTPVR+S KHKKR KSP
Sbjct: 24 NMATLISPRFKSAAAMAGWDEEALLLATLIVEDTPVRDS---KHKKRFVLNSKSPHNNSS 80
Query: 88 XXXXXXXXXXXGVPIPPVVLCLDDEE 11
P+VL LD+EE
Sbjct: 81 RKRRVLRNPR------PIVLDLDEEE 100
>ref|XP_002463433.1| hypothetical protein SORBIDRAFT_02g043730 [Sorghum bicolor]
gi|241926810|gb|EER99954.1| hypothetical protein
SORBIDRAFT_02g043730 [Sorghum bicolor]
Length = 388
Score = 70.1 bits (170), Expect = 3e-10
Identities = 40/88 (45%), Positives = 51/88 (57%)
Frame = -1
Query: 271 AAPTTNRSMILSPGFRSAAAMAGWDEEALLFATLVVEDTPVRESRQHKHKKRLKSPAXXX 92
AA + S +LSP FRSAA +AGWDEE++L A +VVEDTPVRESR+ + +
Sbjct: 19 AAAPKDGSDLLSPRFRSAAELAGWDEESVL-AAMVVEDTPVRESRRKRRASTSSAGGSAG 77
Query: 91 XXXXXXXXXXXXGVPIPPVVLCLDDEEE 8
IPPVVL LDDE++
Sbjct: 78 SSTRKRRPRRQFPAKIPPVVLALDDEDD 105
>dbj|BAJ92308.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 395
Score = 69.3 bits (168), Expect = 5e-10
Identities = 38/82 (46%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Frame = -1
Query: 244 ILSPGFRSAAAMAGWDEEALLFATLVVEDTPVRESRQHKHKK---RLKSPAXXXXXXXXX 74
+LSP FRSAA +AGWDEE++L A LVVEDTPVRESR+ + A
Sbjct: 22 LLSPRFRSAAELAGWDEESILLAALVVEDTPVRESRRKRRSSGSTAAGGSAGSNTRKRRS 81
Query: 73 XXXXXXGVPIPPVVLCLDDEEE 8
PIPPV L LD++E+
Sbjct: 82 RRQSADETPIPPVALVLDEDEK 103
>ref|XP_002300081.1| hypothetical protein POPTR_0001s36210g [Populus trichocarpa]
gi|222847339|gb|EEE84886.1| hypothetical protein
POPTR_0001s36210g [Populus trichocarpa]
Length = 915
Score = 67.0 bits (162), Expect = 2e-09
Identities = 37/83 (44%), Positives = 47/83 (56%)
Frame = -1
Query: 256 NRSMILSPGFRSAAAMAGWDEEALLFATLVVEDTPVRESRQHKHKKRLKSPAXXXXXXXX 77
N + SP F+S AAMAGWDEE++LFA+L+VEDTP RQ +HKKR
Sbjct: 597 NMENLFSPRFKSVAAMAGWDEESILFASLIVEDTP---ERQFEHKKRSDLHFKTPPSTNT 653
Query: 76 XXXXXXXGVPIPPVVLCLDDEEE 8
+ IP +L LD+EEE
Sbjct: 654 RRDQKKSPISIPVPILNLDEEEE 676
>ref|XP_006664479.1| PREDICTED: postreplication repair E3 ubiquitin-protein ligase
RAD18-like [Oryza brachyantha]
Length = 382
Score = 66.6 bits (161), Expect = 3e-09
Identities = 41/93 (44%), Positives = 50/93 (53%), Gaps = 5/93 (5%)
Frame = -1
Query: 271 AAPTTNRSMILSPGFRSAAAMAGWDEEALLFATLVVEDTPVRESRQHKHKKRLKSP---- 104
AA + +LSP FRSAAA+AGWDEE+LL A LVVEDTPVRESR+ + S
Sbjct: 20 AATAKDGGGLLSPRFRSAAALAGWDEESLLHAALVVEDTPVRESRRRRRSSSSASAGGGG 79
Query: 103 -AXXXXXXXXXXXXXXXGVPIPPVVLCLDDEEE 8
IP VVL LDD+++
Sbjct: 80 GGSAGSNTRKRRIRRQPPGSIPAVVLSLDDDDK 112
>gb|EMT00993.1| E3 ubiquitin-protein ligase [Aegilops tauschii]
Length = 460
Score = 66.6 bits (161), Expect = 3e-09
Identities = 37/82 (45%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Frame = -1
Query: 244 ILSPGFRSAAAMAGWDEEALLFATLVVEDTPVRESRQHKH---KKRLKSPAXXXXXXXXX 74
+LSP FRSAA +AGWDEE++L A LVVEDTPVRESR+ +
Sbjct: 21 LLSPRFRSAAELAGWDEESILLAALVVEDTPVRESRRKRRPSGSSTAGGSTGSNTRKRRS 80
Query: 73 XXXXXXGVPIPPVVLCLDDEEE 8
PIPPV L L D+E+
Sbjct: 81 RRQSADETPIPPVALVLGDDEK 102
>ref|XP_004159149.1| PREDICTED: uncharacterized protein LOC101225295 [Cucumis sativus]
Length = 381
Score = 66.2 bits (160), Expect = 4e-09
Identities = 41/78 (52%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Frame = -1
Query: 241 LSPGFRSAAAMAGWDEEALLFATLVVEDTPVRESRQHKHK-KRLKSPAXXXXXXXXXXXX 65
LSP F+SAAAMAGWDEEALLFA+LVV+DTP RE +Q K + KSPA
Sbjct: 26 LSPRFKSAAAMAGWDEEALLFASLVVDDTPEREFQQKKRSVLQRKSPA---SGSRRKRRT 82
Query: 64 XXXGVPIPPVVLCLDDEE 11
+ IP VL LD+ E
Sbjct: 83 LTSIISIPVAVLDLDETE 100