BLASTX nr result

ID: Zingiber24_contig00049965 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00049965
         (206 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001041976.2| Os01g0139200 [Oryza sativa Japonica Group] g...    57   2e-06
ref|XP_006645482.1| PREDICTED: pollen-specific leucine-rich repe...    57   3e-06
gb|AFW79999.1| hypothetical protein ZEAMMB73_538141 [Zea mays]         57   3e-06
gb|AFW79997.1| hypothetical protein ZEAMMB73_538141 [Zea mays]         57   3e-06
ref|NP_001145919.1| hypothetical protein [Zea mays] gi|219884951...    57   3e-06
gb|EAY72459.1| hypothetical protein OsI_00313 [Oryza sativa Indi...    57   3e-06
tpg|DAA53552.1| TPA: hypothetical protein ZEAMMB73_660315 [Zea m...    57   3e-06
ref|XP_002455228.1| hypothetical protein SORBIDRAFT_03g006650 [S...    56   6e-06

>ref|NP_001041976.2| Os01g0139200 [Oryza sativa Japonica Group]
           gi|54290300|dbj|BAD61300.1| unknown protein [Oryza
           sativa Japonica Group] gi|125568956|gb|EAZ10471.1|
           hypothetical protein OsJ_00306 [Oryza sativa Japonica
           Group] gi|255672859|dbj|BAF03890.2| Os01g0139200 [Oryza
           sativa Japonica Group]
          Length = 671

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 39/74 (52%), Positives = 46/74 (62%), Gaps = 6/74 (8%)
 Frame = -3

Query: 204 AISGMGVEEIPRG-STDSASINCLLGLDDGSSTHMRGVGGQSEP--ERRI---LLRPDSS 43
           AISG  ++ IPRG STDSAS+NCLLGL+D SSTH RG    S P  E+R     L   ++
Sbjct: 194 AISG-SLDGIPRGISTDSASVNCLLGLEDDSSTHSRGGPPNSSPAEEQRANQQKLAAAAA 252

Query: 42  SGLGRHGQQVQSVP 1
               RH   VQSVP
Sbjct: 253 VAAARHPHDVQSVP 266


>ref|XP_006645482.1| PREDICTED: pollen-specific leucine-rich repeat extensin-like
           protein 1-like, partial [Oryza brachyantha]
          Length = 583

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 39/74 (52%), Positives = 46/74 (62%), Gaps = 6/74 (8%)
 Frame = -3

Query: 204 AISGMGVEEIPRG-STDSASINCLLGLDDGSSTHMRGVGGQSEP--ERRI---LLRPDSS 43
           AISG  ++ IPRG STDSAS+NCLLGL+D SSTH RG    S P  E+R     L   ++
Sbjct: 106 AISG-SLDGIPRGISTDSASVNCLLGLEDDSSTHSRGGPPNSAPAEEQRANQQKLAAAAA 164

Query: 42  SGLGRHGQQVQSVP 1
               RH   VQSVP
Sbjct: 165 VAAARHPHDVQSVP 178


>gb|AFW79999.1| hypothetical protein ZEAMMB73_538141 [Zea mays]
          Length = 562

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 38/79 (48%), Positives = 48/79 (60%), Gaps = 11/79 (13%)
 Frame = -3

Query: 204 AISGMGVEEIPRG-STDSASINCLLGLDDGSSTHMR-GVGGQSEPERRILLRPD------ 49
           AISG  ++ IPRG STDSAS+NCLLGL+D SS H R GV   +  E +   +P       
Sbjct: 193 AISG-SLDGIPRGISTDSASVNCLLGLEDDSSVHSRSGVTNSAPAEDQRASQPKLPAGAT 251

Query: 48  ---SSSGLGRHGQQVQSVP 1
              +++G GRH   VQSVP
Sbjct: 252 AVAAAAGAGRHPHDVQSVP 270


>gb|AFW79997.1| hypothetical protein ZEAMMB73_538141 [Zea mays]
          Length = 435

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 38/79 (48%), Positives = 48/79 (60%), Gaps = 11/79 (13%)
 Frame = -3

Query: 204 AISGMGVEEIPRG-STDSASINCLLGLDDGSSTHMR-GVGGQSEPERRILLRPD------ 49
           AISG  ++ IPRG STDSAS+NCLLGL+D SS H R GV   +  E +   +P       
Sbjct: 193 AISG-SLDGIPRGISTDSASVNCLLGLEDDSSVHSRSGVTNSAPAEDQRASQPKLPAGAT 251

Query: 48  ---SSSGLGRHGQQVQSVP 1
              +++G GRH   VQSVP
Sbjct: 252 AVAAAAGAGRHPHDVQSVP 270


>ref|NP_001145919.1| hypothetical protein [Zea mays] gi|219884951|gb|ACL52850.1| unknown
           [Zea mays] gi|413947349|gb|AFW79998.1| hypothetical
           protein ZEAMMB73_538141 [Zea mays]
          Length = 665

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 38/79 (48%), Positives = 48/79 (60%), Gaps = 11/79 (13%)
 Frame = -3

Query: 204 AISGMGVEEIPRG-STDSASINCLLGLDDGSSTHMR-GVGGQSEPERRILLRPD------ 49
           AISG  ++ IPRG STDSAS+NCLLGL+D SS H R GV   +  E +   +P       
Sbjct: 193 AISG-SLDGIPRGISTDSASVNCLLGLEDDSSVHSRSGVTNSAPAEDQRASQPKLPAGAT 251

Query: 48  ---SSSGLGRHGQQVQSVP 1
              +++G GRH   VQSVP
Sbjct: 252 AVAAAAGAGRHPHDVQSVP 270


>gb|EAY72459.1| hypothetical protein OsI_00313 [Oryza sativa Indica Group]
          Length = 670

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 39/74 (52%), Positives = 46/74 (62%), Gaps = 6/74 (8%)
 Frame = -3

Query: 204 AISGMGVEEIPRG-STDSASINCLLGLDDGSSTHMRGVGGQSEP--ERRI---LLRPDSS 43
           AISG  ++ IPRG STDSAS+NCLLGL+D SSTH RG    S P  E+R     L   ++
Sbjct: 194 AISG-SLDGIPRGISTDSASVNCLLGLEDDSSTHSRGGPPNSAPAEEQRANQQKLAAAAA 252

Query: 42  SGLGRHGQQVQSVP 1
               RH   VQSVP
Sbjct: 253 VAAARHPHDVQSVP 266


>tpg|DAA53552.1| TPA: hypothetical protein ZEAMMB73_660315 [Zea mays]
           gi|414876422|tpg|DAA53553.1| TPA: hypothetical protein
           ZEAMMB73_660315 [Zea mays]
          Length = 659

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 38/77 (49%), Positives = 47/77 (61%), Gaps = 9/77 (11%)
 Frame = -3

Query: 204 AISGMGVEEIPRG-STDSASINCLLGLDDGSSTHMR-GVGGQSEPERRILLRPD------ 49
           AISG  ++ IPRG STDSAS+NCLLGL+D SS H R GV   +  E +   +P       
Sbjct: 194 AISG-SLDGIPRGISTDSASVNCLLGLEDDSSVHSRSGVTNSAPTEDQRASQPKLQAGAA 252

Query: 48  -SSSGLGRHGQQVQSVP 1
            ++ G GRH   VQSVP
Sbjct: 253 AAAVGTGRHPHDVQSVP 269


>ref|XP_002455228.1| hypothetical protein SORBIDRAFT_03g006650 [Sorghum bicolor]
           gi|241927203|gb|EES00348.1| hypothetical protein
           SORBIDRAFT_03g006650 [Sorghum bicolor]
          Length = 663

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 38/80 (47%), Positives = 48/80 (60%), Gaps = 12/80 (15%)
 Frame = -3

Query: 204 AISGMGVEEIPRG-STDSASINCLLGLDDGSSTHMR-GVGGQSEPERRILLRPD------ 49
           AISG  ++ IPRG STDSAS+NCLLGL+D SS H R GV   +  E +   +P       
Sbjct: 197 AISG-SLDGIPRGISTDSASVNCLLGLEDDSSVHSRSGVTNSAPTEDQRASQPKLPVGAT 255

Query: 48  ----SSSGLGRHGQQVQSVP 1
               +++G GRH   VQSVP
Sbjct: 256 AAVAAAAGAGRHLHDVQSVP 275


Top