BLASTX nr result
ID: Zingiber24_contig00049906
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00049906
(208 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AGV28593.1| auxin efflux carrier 1a [Oryza sativa Indica Group] 71 1e-10
ref|NP_001057227.1| Os06g0232300 [Oryza sativa Japonica Group] g... 71 1e-10
ref|NP_001267515.1| uncharacterized protein LOC100786572 [Glycin... 68 1e-09
gb|AAN71616.1| PIN-like protein [Gossypium hirsutum] 67 2e-09
gb|EAZ36376.1| hypothetical protein OsJ_20704 [Oryza sativa Japo... 67 2e-09
gb|AGY29597.1| auxin efflux carrier [Rosa canina] 67 3e-09
ref|XP_004965062.1| PREDICTED: probable auxin efflux carrier com... 65 9e-09
ref|XP_004965061.1| PREDICTED: probable auxin efflux carrier com... 65 9e-09
ref|XP_004299530.1| PREDICTED: auxin efflux carrier component 1-... 65 1e-08
gb|AAQ14257.1|AF247004_1 auxin efflux carrier [Momordica charantia] 65 1e-08
gb|AAQ14256.1|AF246995_1 AEC1 [Momordica charantia] 65 1e-08
gb|AGG79239.1| auxin efflux facilitator PIN1 [Nicotiana tabacum] 64 3e-08
gb|ABQ95673.1| auxin efflux carrier, partial [Malus domestica] 63 4e-08
gb|ABQ95663.1| auxin efflux carrier, partial [Malus domestica] 63 4e-08
gb|ABQ95672.1| auxin efflux carrier, partial [Malus domestica] 63 4e-08
gb|ABQ95664.1| auxin efflux carrier, partial [Malus domestica] 63 4e-08
gb|AGG79244.1| auxin efflux facilitator PIN1b [Nicotiana tabacum] 62 8e-08
ref|XP_006300880.1| hypothetical protein CARUB_v10019970mg [Caps... 61 1e-07
ref|XP_003564038.1| PREDICTED: probable auxin efflux carrier com... 61 1e-07
gb|AEK01107.1| auxin transport protein [Capsella bursa-pastoris] 61 1e-07
>gb|AGV28593.1| auxin efflux carrier 1a [Oryza sativa Indica Group]
Length = 593
Score = 71.2 bits (173), Expect = 1e-10
Identities = 40/64 (62%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Frame = +3
Query: 18 YPTLNPTVF-PPAPKRAATGQPNVPKTEDAGNKDLHMFVWSSSASPVSDVFGNGKDYGFP 194
YP NP + PP PK+AA GQ K ED KDLHMFVWSSSASPVSDVFGNG +Y
Sbjct: 307 YPAPNPAMAAPPKPKKAANGQA---KGEDG--KDLHMFVWSSSASPVSDVFGNGAEYNDA 361
Query: 195 PAVE 206
AV+
Sbjct: 362 AAVK 365
>ref|NP_001057227.1| Os06g0232300 [Oryza sativa Japonica Group]
gi|75116026|sp|Q67UL3.1|PIN1C_ORYSJ RecName:
Full=Probable auxin efflux carrier component 1c;
AltName: Full=OsPIN1c gi|51535183|dbj|BAD38156.1|
putative auxin transporter [Oryza sativa Japonica Group]
gi|113595267|dbj|BAF19141.1| Os06g0232300 [Oryza sativa
Japonica Group] gi|215737025|dbj|BAG95954.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|218197852|gb|EEC80279.1| hypothetical protein
OsI_22273 [Oryza sativa Indica Group]
gi|294831562|tpd|FAA00678.1| TPA: auxin efflux carrier
[Oryza sativa Japonica Group]
gi|541905599|gb|AGV28595.1| auxin efflux carrier 1d
[Oryza sativa Indica Group]
Length = 592
Score = 71.2 bits (173), Expect = 1e-10
Identities = 40/64 (62%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Frame = +3
Query: 18 YPTLNPTVF-PPAPKRAATGQPNVPKTEDAGNKDLHMFVWSSSASPVSDVFGNGKDYGFP 194
YP NP + PP PK+AA GQ K ED KDLHMFVWSSSASPVSDVFGNG +Y
Sbjct: 307 YPAPNPAMAAPPKPKKAANGQA---KGEDG--KDLHMFVWSSSASPVSDVFGNGAEYNDA 361
Query: 195 PAVE 206
AV+
Sbjct: 362 AAVK 365
>ref|NP_001267515.1| uncharacterized protein LOC100786572 [Glycine max]
gi|481044546|gb|AGJ95055.1| PIN5 [Glycine max]
Length = 603
Score = 68.2 bits (165), Expect = 1e-09
Identities = 35/59 (59%), Positives = 37/59 (62%)
Frame = +3
Query: 9 TAPYPTLNPTVFPPAPKRAATGQPNVPKTEDAGNKDLHMFVWSSSASPVSDVFGNGKDY 185
T YP NP +F P T NV K D NKDLHMFVWSSSASPVSDVFG G +Y
Sbjct: 327 TGHYPAPNPGMFSP------TASKNVAKKPDDPNKDLHMFVWSSSASPVSDVFGGGHEY 379
>gb|AAN71616.1| PIN-like protein [Gossypium hirsutum]
Length = 576
Score = 67.4 bits (163), Expect = 2e-09
Identities = 35/63 (55%), Positives = 42/63 (66%), Gaps = 4/63 (6%)
Frame = +3
Query: 12 APYPTLNPTVFPPAPKRAATGQPN--VPKTEDAGNKDLHMFVWSSSASPVSDVF--GNGK 179
A YP NP +F P +A T +PN P+ + G +DLHMFVWSSSASPVSDVF G G
Sbjct: 316 AHYPAPNPGMFSPNGSKANTKKPNDQAPQKAEDGGRDLHMFVWSSSASPVSDVFGGGGGH 375
Query: 180 DYG 188
+YG
Sbjct: 376 EYG 378
>gb|EAZ36376.1| hypothetical protein OsJ_20704 [Oryza sativa Japonica Group]
Length = 613
Score = 67.4 bits (163), Expect = 2e-09
Identities = 37/55 (67%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Frame = +3
Query: 18 YPTLNPTVF-PPAPKRAATGQPNVPKTEDAGNKDLHMFVWSSSASPVSDVFGNGK 179
YP NP + PP PK+AA GQ K ED KDLHMFVWSSSASPVSDVFGNG+
Sbjct: 294 YPAPNPAMAAPPKPKKAANGQA---KGEDG--KDLHMFVWSSSASPVSDVFGNGR 343
>gb|AGY29597.1| auxin efflux carrier [Rosa canina]
Length = 621
Score = 66.6 bits (161), Expect = 3e-09
Identities = 38/69 (55%), Positives = 43/69 (62%), Gaps = 9/69 (13%)
Frame = +3
Query: 9 TAPYPTLNPTVFPP---------APKRAATGQPNVPKTEDAGNKDLHMFVWSSSASPVSD 161
TA YP NP +F P APKR PN P +D G +DLHMFVWSSSASPVSD
Sbjct: 327 TAHYPAPNPGMFSPTTAASKNVVAPKRPNGNGPNGPAAQDGG-RDLHMFVWSSSASPVSD 385
Query: 162 VFGNGKDYG 188
VFG+ +YG
Sbjct: 386 VFGS-NEYG 393
>ref|XP_004965062.1| PREDICTED: probable auxin efflux carrier component 1c-like isoform
X2 [Setaria italica]
Length = 597
Score = 65.1 bits (157), Expect = 9e-09
Identities = 40/67 (59%), Positives = 44/67 (65%), Gaps = 4/67 (5%)
Frame = +3
Query: 18 YPTLNPTVFPPA---PKRAATGQPNVPKTEDAGNKDLHMFVWSSSASPVSDVFGNGK-DY 185
YP NP + PA PK+AA GQ K ED KDLHMFVWSSSASPVSDVFGNG +Y
Sbjct: 304 YPAPNPAMAAPAKGQPKKAANGQA---KGEDG--KDLHMFVWSSSASPVSDVFGNGNAEY 358
Query: 186 GFPPAVE 206
AV+
Sbjct: 359 NDAAAVK 365
>ref|XP_004965061.1| PREDICTED: probable auxin efflux carrier component 1c-like isoform
X1 [Setaria italica]
Length = 612
Score = 65.1 bits (157), Expect = 9e-09
Identities = 40/67 (59%), Positives = 44/67 (65%), Gaps = 4/67 (5%)
Frame = +3
Query: 18 YPTLNPTVFPPA---PKRAATGQPNVPKTEDAGNKDLHMFVWSSSASPVSDVFGNGK-DY 185
YP NP + PA PK+AA GQ K ED KDLHMFVWSSSASPVSDVFGNG +Y
Sbjct: 304 YPAPNPAMAAPAKGQPKKAANGQA---KGEDG--KDLHMFVWSSSASPVSDVFGNGNAEY 358
Query: 186 GFPPAVE 206
AV+
Sbjct: 359 NDAAAVK 365
>ref|XP_004299530.1| PREDICTED: auxin efflux carrier component 1-like [Fragaria vesca
subsp. vesca]
Length = 620
Score = 64.7 bits (156), Expect = 1e-08
Identities = 38/69 (55%), Positives = 42/69 (60%), Gaps = 9/69 (13%)
Frame = +3
Query: 9 TAPYPTLNPTVFPP---------APKRAATGQPNVPKTEDAGNKDLHMFVWSSSASPVSD 161
TA YP NP +F P APKR PN P + G KDLHMFVWSSSASPVSD
Sbjct: 327 TAHYPAPNPGMFSPTTAASKNVVAPKRPNGNGPNGPAQD--GGKDLHMFVWSSSASPVSD 384
Query: 162 VFGNGKDYG 188
VFG+ +YG
Sbjct: 385 VFGS-NEYG 392
>gb|AAQ14257.1|AF247004_1 auxin efflux carrier [Momordica charantia]
Length = 607
Score = 64.7 bits (156), Expect = 1e-08
Identities = 32/65 (49%), Positives = 40/65 (61%), Gaps = 8/65 (12%)
Frame = +3
Query: 18 YPTLNPTVFPPA--------PKRAATGQPNVPKTEDAGNKDLHMFVWSSSASPVSDVFGN 173
YP NP +F P K++A G V + + GN+DLHMFVWSSSASPVSDVFG
Sbjct: 317 YPVPNPGMFSPTGSKNAQPNAKKSANGNGVVAQKTEEGNRDLHMFVWSSSASPVSDVFGG 376
Query: 174 GKDYG 188
++G
Sbjct: 377 NHEFG 381
>gb|AAQ14256.1|AF246995_1 AEC1 [Momordica charantia]
Length = 607
Score = 64.7 bits (156), Expect = 1e-08
Identities = 32/65 (49%), Positives = 40/65 (61%), Gaps = 8/65 (12%)
Frame = +3
Query: 18 YPTLNPTVFPPA--------PKRAATGQPNVPKTEDAGNKDLHMFVWSSSASPVSDVFGN 173
YP NP +F P K++A G V + + GN+DLHMFVWSSSASPVSDVFG
Sbjct: 317 YPVPNPGMFSPTGSKNAQPNAKKSANGNGVVAQKTEEGNRDLHMFVWSSSASPVSDVFGG 376
Query: 174 GKDYG 188
++G
Sbjct: 377 NHEFG 381
>gb|AGG79239.1| auxin efflux facilitator PIN1 [Nicotiana tabacum]
Length = 610
Score = 63.5 bits (153), Expect = 3e-08
Identities = 35/62 (56%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Frame = +3
Query: 9 TAPYPTLNPTVFPPAPKRAATGQPNVPKTE--DAGNKDLHMFVWSSSASPVSDVFGNGKD 182
T YP NP +F P+ A N K + G KDLHMFVWSSSASPVSDVFG G D
Sbjct: 320 TTHYPAPNPGMFSPSNGAKAVASTNNKKGNKGEEGGKDLHMFVWSSSASPVSDVFG-GHD 378
Query: 183 YG 188
YG
Sbjct: 379 YG 380
>gb|ABQ95673.1| auxin efflux carrier, partial [Malus domestica]
Length = 370
Score = 63.2 bits (152), Expect = 4e-08
Identities = 37/72 (51%), Positives = 40/72 (55%), Gaps = 13/72 (18%)
Frame = +3
Query: 12 APYPTLNPTVFPPAPKRAATGQPN------------VPKTEDA-GNKDLHMFVWSSSASP 152
A YP NP +F P R T N KTED G KDLHMFVWSSSASP
Sbjct: 153 AHYPAPNPGMFSPTASRTVTANANSNAMNAKRANGQAQKTEDTNGGKDLHMFVWSSSASP 212
Query: 153 VSDVFGNGKDYG 188
VSDVFG+ +YG
Sbjct: 213 VSDVFGS-NEYG 223
>gb|ABQ95663.1| auxin efflux carrier, partial [Malus domestica]
Length = 481
Score = 63.2 bits (152), Expect = 4e-08
Identities = 37/72 (51%), Positives = 40/72 (55%), Gaps = 13/72 (18%)
Frame = +3
Query: 12 APYPTLNPTVFPPAPKRAATGQPN------------VPKTEDA-GNKDLHMFVWSSSASP 152
A YP NP +F P R T N KTED G KDLHMFVWSSSASP
Sbjct: 183 AHYPAPNPGMFSPTASRTVTANANSNAMNAKRANGQAQKTEDTNGGKDLHMFVWSSSASP 242
Query: 153 VSDVFGNGKDYG 188
VSDVFG+ +YG
Sbjct: 243 VSDVFGS-NEYG 253
>gb|ABQ95672.1| auxin efflux carrier, partial [Malus domestica]
Length = 370
Score = 63.2 bits (152), Expect = 4e-08
Identities = 37/72 (51%), Positives = 40/72 (55%), Gaps = 13/72 (18%)
Frame = +3
Query: 12 APYPTLNPTVFPPAPKRAATGQPN------------VPKTEDA-GNKDLHMFVWSSSASP 152
A YP NP +F P R T N KTED G KDLHMFVWSSSASP
Sbjct: 153 AHYPAPNPGMFSPTASRTVTANANSNAMNAKRANGQAQKTEDTNGGKDLHMFVWSSSASP 212
Query: 153 VSDVFGNGKDYG 188
VSDVFG+ +YG
Sbjct: 213 VSDVFGS-NEYG 223
>gb|ABQ95664.1| auxin efflux carrier, partial [Malus domestica]
Length = 481
Score = 63.2 bits (152), Expect = 4e-08
Identities = 37/72 (51%), Positives = 40/72 (55%), Gaps = 13/72 (18%)
Frame = +3
Query: 12 APYPTLNPTVFPPAPKRAATGQPN------------VPKTEDA-GNKDLHMFVWSSSASP 152
A YP NP +F P R T N KTED G KDLHMFVWSSSASP
Sbjct: 183 AHYPAPNPGMFSPTASRTVTANANSNAMNAKRANGQAQKTEDTNGGKDLHMFVWSSSASP 242
Query: 153 VSDVFGNGKDYG 188
VSDVFG+ +YG
Sbjct: 243 VSDVFGS-NEYG 253
>gb|AGG79244.1| auxin efflux facilitator PIN1b [Nicotiana tabacum]
Length = 610
Score = 62.0 bits (149), Expect = 8e-08
Identities = 35/63 (55%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Frame = +3
Query: 9 TAPYPTLNPTVFPPAPKRAATGQPNVPKTE---DAGNKDLHMFVWSSSASPVSDVFGNGK 179
T YP NP +F P+ A G K + G KDLHMFVWSSSASPVSDVFG G
Sbjct: 319 TTHYPAPNPGMFSPSNGAKAVGSNTNNKKGNKGEEGGKDLHMFVWSSSASPVSDVFG-GH 377
Query: 180 DYG 188
DYG
Sbjct: 378 DYG 380
>ref|XP_006300880.1| hypothetical protein CARUB_v10019970mg [Capsella rubella]
gi|482569590|gb|EOA33778.1| hypothetical protein
CARUB_v10019970mg [Capsella rubella]
Length = 625
Score = 61.2 bits (147), Expect = 1e-07
Identities = 34/64 (53%), Positives = 38/64 (59%), Gaps = 6/64 (9%)
Frame = +3
Query: 12 APYPTLNPTVFPPAPKR----AATGQPNVP--KTEDAGNKDLHMFVWSSSASPVSDVFGN 173
A YP NP +F P P AA G V K +D +DLHMFVWSSSASPVSDVFG
Sbjct: 331 AHYPAPNPGMFSPQPGSGGVTAAKGNAPVSGGKRQDGNGRDLHMFVWSSSASPVSDVFGG 390
Query: 174 GKDY 185
G +
Sbjct: 391 GNHH 394
>ref|XP_003564038.1| PREDICTED: probable auxin efflux carrier component 1c-like
[Brachypodium distachyon]
Length = 596
Score = 61.2 bits (147), Expect = 1e-07
Identities = 34/61 (55%), Positives = 37/61 (60%)
Frame = +3
Query: 18 YPTLNPTVFPPAPKRAATGQPNVPKTEDAGNKDLHMFVWSSSASPVSDVFGNGKDYGFPP 197
YP NP + AP + Q K ED KDLHMFVWSSSASPVSDVFGNG +Y
Sbjct: 308 YPAPNPAM-AAAPPKPGKKQQQQGKGEDG--KDLHMFVWSSSASPVSDVFGNGAEYNVDA 364
Query: 198 A 200
A
Sbjct: 365 A 365
>gb|AEK01107.1| auxin transport protein [Capsella bursa-pastoris]
Length = 622
Score = 61.2 bits (147), Expect = 1e-07
Identities = 34/64 (53%), Positives = 38/64 (59%), Gaps = 6/64 (9%)
Frame = +3
Query: 12 APYPTLNPTVFPPAPKR----AATGQPNVP--KTEDAGNKDLHMFVWSSSASPVSDVFGN 173
A YP NP +F P P AA G V K +D +DLHMFVWSSSASPVSDVFG
Sbjct: 328 AHYPAPNPGMFSPQPGSGGVTAAKGNAPVSGGKRQDGNGRDLHMFVWSSSASPVSDVFGG 387
Query: 174 GKDY 185
G +
Sbjct: 388 GNHH 391