BLASTX nr result
ID: Zingiber24_contig00049885
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00049885
(408 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOX98333.1| DNA-directed RNA polymerase family protein [Theob... 162 3e-38
ref|XP_006422955.1| hypothetical protein CICLE_v10028849mg [Citr... 158 8e-37
gb|EMS46394.1| DNA-directed RNA polymerase II subunit RPB3-A [Tr... 158 8e-37
gb|EMT28290.1| DNA-directed RNA polymerase II subunit RPB3-A [Ae... 157 2e-36
ref|XP_002518700.1| DNA-directed RNA polymerase II subunit, puta... 156 2e-36
ref|XP_001765827.1| predicted protein [Physcomitrella patens] gi... 156 2e-36
ref|XP_004304034.1| PREDICTED: DNA-directed RNA polymerase II su... 155 4e-36
gb|EMJ03015.1| hypothetical protein PRUPE_ppa008812mg [Prunus pe... 155 7e-36
emb|CBI40277.3| unnamed protein product [Vitis vinifera] 155 7e-36
ref|XP_002285322.1| PREDICTED: DNA-directed RNA polymerase II su... 155 7e-36
emb|CAN60923.1| hypothetical protein VITISV_019338 [Vitis vinifera] 155 7e-36
ref|XP_006853170.1| hypothetical protein AMTR_s00038p00194050 [A... 154 9e-36
ref|XP_003576823.1| PREDICTED: DNA-directed RNA polymerase II su... 154 9e-36
gb|EMJ01858.1| hypothetical protein PRUPE_ppa016873mg [Prunus pe... 153 2e-35
ref|XP_006660419.1| PREDICTED: DNA-directed RNA polymerases II, ... 153 3e-35
ref|XP_004505300.1| PREDICTED: DNA-directed RNA polymerase II su... 153 3e-35
gb|EMT18475.1| DNA-directed RNA polymerase II subunit RPB3-A [Ae... 152 3e-35
ref|XP_003556247.1| PREDICTED: DNA-directed RNA polymerases II, ... 152 3e-35
ref|XP_003529425.1| PREDICTED: DNA-directed RNA polymerases II, ... 152 3e-35
ref|XP_003607895.1| DNA-directed RNA polymerase II subunit RPB3-... 152 4e-35
>gb|EOX98333.1| DNA-directed RNA polymerase family protein [Theobroma cacao]
Length = 318
Score = 162 bits (411), Expect = 3e-38
Identities = 86/114 (75%), Positives = 99/114 (86%), Gaps = 3/114 (2%)
Frame = +1
Query: 1 TLTLEEKQAWVESSPTKVFVIDPNTQQVEVNDPEAYTYEDEVLKKAEAMGKPGLIEIFPK 180
TLTLEEKQ++VESSPT+VF IDPNTQQV V DPEAYTY+DEVLKKAEAMGKPGL+EI+ K
Sbjct: 202 TLTLEEKQSFVESSPTRVFDIDPNTQQVVVVDPEAYTYDDEVLKKAEAMGKPGLVEIYAK 261
Query: 181 ENSFIFTVESTGAIKASQMLLNAINVLKQKLDDIRCSHD--DASD-MNELTSHL 333
E+SFIFTVESTGAIKASQ++LNAI VLKQKLD +R S D +A D EL +H+
Sbjct: 262 EDSFIFTVESTGAIKASQLVLNAIEVLKQKLDAVRLSEDTVEADDQFGELGAHM 315
>ref|XP_006422955.1| hypothetical protein CICLE_v10028849mg [Citrus clementina]
gi|568867393|ref|XP_006487022.1| PREDICTED: DNA-directed
RNA polymerases II, IV and V subunit 3-like [Citrus
sinensis] gi|557524889|gb|ESR36195.1| hypothetical
protein CICLE_v10028849mg [Citrus clementina]
Length = 319
Score = 158 bits (399), Expect = 8e-37
Identities = 83/114 (72%), Positives = 97/114 (85%), Gaps = 3/114 (2%)
Frame = +1
Query: 1 TLTLEEKQAWVESSPTKVFVIDPNTQQVEVNDPEAYTYEDEVLKKAEAMGKPGLIEIFPK 180
+L+LEEKQ+WVESSPTKVF IDPNT QV V D EAYTY+DEV+KKAEAMGKPGL+EI+ K
Sbjct: 203 SLSLEEKQSWVESSPTKVFDIDPNTGQVYVVDAEAYTYDDEVIKKAEAMGKPGLVEIYAK 262
Query: 181 ENSFIFTVESTGAIKASQMLLNAINVLKQKLDDIRCSHD--DASD-MNELTSHL 333
E+SFIFTVESTGAIKASQ++LNAI VLKQKLD +R S D +A D EL +H+
Sbjct: 263 EDSFIFTVESTGAIKASQLVLNAIEVLKQKLDAVRLSEDTVEADDQFGELGAHM 316
>gb|EMS46394.1| DNA-directed RNA polymerase II subunit RPB3-A [Triticum urartu]
Length = 315
Score = 158 bits (399), Expect = 8e-37
Identities = 80/111 (72%), Positives = 94/111 (84%)
Frame = +1
Query: 1 TLTLEEKQAWVESSPTKVFVIDPNTQQVEVNDPEAYTYEDEVLKKAEAMGKPGLIEIFPK 180
TLTLEEKQ+WVESSPTKVF IDP TQQV V DPEAYTY+DEV+KKAEAMGKPGL+EI K
Sbjct: 203 TLTLEEKQSWVESSPTKVFDIDPVTQQVTVVDPEAYTYDDEVIKKAEAMGKPGLVEINAK 262
Query: 181 ENSFIFTVESTGAIKASQMLLNAINVLKQKLDDIRCSHDDASDMNELTSHL 333
E+SF+FTVE+TGAI A ++++NAI VL+QKLD IR DD D+ EL +HL
Sbjct: 263 EDSFVFTVETTGAITAYELIMNAITVLRQKLDAIRLQDDD-GDLGELDAHL 312
>gb|EMT28290.1| DNA-directed RNA polymerase II subunit RPB3-A [Aegilops tauschii]
Length = 192
Score = 157 bits (396), Expect = 2e-36
Identities = 78/111 (70%), Positives = 94/111 (84%)
Frame = +1
Query: 1 TLTLEEKQAWVESSPTKVFVIDPNTQQVEVNDPEAYTYEDEVLKKAEAMGKPGLIEIFPK 180
TLTLEEKQ+WVESSPTKVF IDP TQQV + DPEAYTY+DEV+KKAEAMGKPGL+EI K
Sbjct: 80 TLTLEEKQSWVESSPTKVFDIDPVTQQVTIVDPEAYTYDDEVIKKAEAMGKPGLVEINAK 139
Query: 181 ENSFIFTVESTGAIKASQMLLNAINVLKQKLDDIRCSHDDASDMNELTSHL 333
E+SF+FTVE+TGAI A ++++NAI VL+QKLD +R DD D+ EL +HL
Sbjct: 140 EDSFVFTVETTGAITAYELIMNAITVLRQKLDAVRLQDDD-GDLGELGAHL 189
>ref|XP_002518700.1| DNA-directed RNA polymerase II subunit, putative [Ricinus communis]
gi|223542081|gb|EEF43625.1| DNA-directed RNA polymerase
II subunit, putative [Ricinus communis]
Length = 318
Score = 156 bits (395), Expect = 2e-36
Identities = 81/114 (71%), Positives = 97/114 (85%), Gaps = 3/114 (2%)
Frame = +1
Query: 1 TLTLEEKQAWVESSPTKVFVIDPNTQQVEVNDPEAYTYEDEVLKKAEAMGKPGLIEIFPK 180
+L+LEEKQ+WVESSPTKVF IDPNTQQV V DPEAYTY++EV+KKAE+MGKPGL+ I K
Sbjct: 202 SLSLEEKQSWVESSPTKVFDIDPNTQQVVVVDPEAYTYDEEVIKKAESMGKPGLVNIQAK 261
Query: 181 ENSFIFTVESTGAIKASQMLLNAINVLKQKLDDIRCSHD--DASD-MNELTSHL 333
E+SFIFTVESTGAIKASQ++LNAI +LKQKLD +R S D +A D EL +H+
Sbjct: 262 EDSFIFTVESTGAIKASQLVLNAIEILKQKLDAVRLSEDTVEADDQFGELGAHM 315
>ref|XP_001765827.1| predicted protein [Physcomitrella patens]
gi|162683004|gb|EDQ69418.1| predicted protein
[Physcomitrella patens]
Length = 324
Score = 156 bits (395), Expect = 2e-36
Identities = 81/114 (71%), Positives = 95/114 (83%), Gaps = 3/114 (2%)
Frame = +1
Query: 1 TLTLEEKQAWVESSPTKVFVIDPNTQQVEVNDPEAYTYEDEVLKKAEAMGKPGLIEIFPK 180
TLTLEEKQ W++SSPTKVF +DP +QQV V DPEAYTY++EVLKKAEAMGKPGL+EI+ K
Sbjct: 206 TLTLEEKQEWIDSSPTKVFELDPVSQQVVVVDPEAYTYDEEVLKKAEAMGKPGLVEIYSK 265
Query: 181 ENSFIFTVESTGAIKASQMLLNAINVLKQKLDDIRCSHD--DASD-MNELTSHL 333
E+SFIFTVESTGAIKASQM LNAI +LK KLD +R S D +A D EL +H+
Sbjct: 266 EDSFIFTVESTGAIKASQMFLNAIEILKSKLDAVRLSFDTEEADDQFGELGAHM 319
>ref|XP_004304034.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A-like
[Fragaria vesca subsp. vesca]
Length = 318
Score = 155 bits (393), Expect = 4e-36
Identities = 81/114 (71%), Positives = 96/114 (84%), Gaps = 3/114 (2%)
Frame = +1
Query: 1 TLTLEEKQAWVESSPTKVFVIDPNTQQVEVNDPEAYTYEDEVLKKAEAMGKPGLIEIFPK 180
TL+LE+K AWV+SSPTKVF IDPNT +V V DPEAYTY+DEV+KKAEAMGKPGL++I K
Sbjct: 202 TLSLEDKAAWVDSSPTKVFEIDPNTGKVVVVDPEAYTYDDEVIKKAEAMGKPGLVDITAK 261
Query: 181 ENSFIFTVESTGAIKASQMLLNAINVLKQKLDDIRCSHD--DASD-MNELTSHL 333
E+SFIFTVESTGAIKASQ+LLNAI +LKQKLD +R S D +A D EL +H+
Sbjct: 262 EDSFIFTVESTGAIKASQLLLNAIEILKQKLDAVRLSEDTVEADDQFGELGAHM 315
>gb|EMJ03015.1| hypothetical protein PRUPE_ppa008812mg [Prunus persica]
Length = 318
Score = 155 bits (391), Expect = 7e-36
Identities = 79/113 (69%), Positives = 95/113 (84%), Gaps = 3/113 (2%)
Frame = +1
Query: 4 LTLEEKQAWVESSPTKVFVIDPNTQQVEVNDPEAYTYEDEVLKKAEAMGKPGLIEIFPKE 183
LTL+EK+AWVESSPTKVF DP T++V V DPEAYTY+DEV+KKAEAMGKPGL++I KE
Sbjct: 203 LTLDEKKAWVESSPTKVFDFDPKTEKVMVVDPEAYTYDDEVIKKAEAMGKPGLVDIIAKE 262
Query: 184 NSFIFTVESTGAIKASQMLLNAINVLKQKLDDIRCSHD--DASD-MNELTSHL 333
+SFIFTVESTGA+KASQ+LLNAI +LKQKLD +R S D +A D EL +H+
Sbjct: 263 DSFIFTVESTGAVKASQLLLNAIEILKQKLDAVRLSEDTVEADDQFGELGAHM 315
>emb|CBI40277.3| unnamed protein product [Vitis vinifera]
Length = 206
Score = 155 bits (391), Expect = 7e-36
Identities = 82/114 (71%), Positives = 97/114 (85%), Gaps = 3/114 (2%)
Frame = +1
Query: 1 TLTLEEKQAWVESSPTKVFVIDPNTQQVEVNDPEAYTYEDEVLKKAEAMGKPGLIEIFPK 180
+LTLEEK +WVESSPTKVF ID ++QQV V D EAYTY+DEVLKKAEAMGKPGL+EI+ K
Sbjct: 90 SLTLEEKTSWVESSPTKVFDIDASSQQVVVADAEAYTYDDEVLKKAEAMGKPGLVEIYAK 149
Query: 181 ENSFIFTVESTGAIKASQMLLNAINVLKQKLDDIRCSHD--DASD-MNELTSHL 333
E+SFIFTVESTGAIKASQ++LNAI+VLKQKLD +R S D +A D EL +H+
Sbjct: 150 EDSFIFTVESTGAIKASQLVLNAIDVLKQKLDAVRLSEDTVEADDQFGELGAHM 203
>ref|XP_002285322.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A [Vitis
vinifera]
Length = 318
Score = 155 bits (391), Expect = 7e-36
Identities = 82/114 (71%), Positives = 97/114 (85%), Gaps = 3/114 (2%)
Frame = +1
Query: 1 TLTLEEKQAWVESSPTKVFVIDPNTQQVEVNDPEAYTYEDEVLKKAEAMGKPGLIEIFPK 180
+LTLEEK +WVESSPTKVF ID ++QQV V D EAYTY+DEVLKKAEAMGKPGL+EI+ K
Sbjct: 202 SLTLEEKTSWVESSPTKVFDIDASSQQVVVADAEAYTYDDEVLKKAEAMGKPGLVEIYAK 261
Query: 181 ENSFIFTVESTGAIKASQMLLNAINVLKQKLDDIRCSHD--DASD-MNELTSHL 333
E+SFIFTVESTGAIKASQ++LNAI+VLKQKLD +R S D +A D EL +H+
Sbjct: 262 EDSFIFTVESTGAIKASQLVLNAIDVLKQKLDAVRLSEDTVEADDQFGELGAHM 315
>emb|CAN60923.1| hypothetical protein VITISV_019338 [Vitis vinifera]
Length = 318
Score = 155 bits (391), Expect = 7e-36
Identities = 82/114 (71%), Positives = 97/114 (85%), Gaps = 3/114 (2%)
Frame = +1
Query: 1 TLTLEEKQAWVESSPTKVFVIDPNTQQVEVNDPEAYTYEDEVLKKAEAMGKPGLIEIFPK 180
+LTLEEK +WVESSPTKVF ID ++QQV V D EAYTY+DEVLKKAEAMGKPGL+EI+ K
Sbjct: 202 SLTLEEKTSWVESSPTKVFDIDASSQQVVVADAEAYTYDDEVLKKAEAMGKPGLVEIYAK 261
Query: 181 ENSFIFTVESTGAIKASQMLLNAINVLKQKLDDIRCSHD--DASD-MNELTSHL 333
E+SFIFTVESTGAIKASQ++LNAI+VLKQKLD +R S D +A D EL +H+
Sbjct: 262 EDSFIFTVESTGAIKASQLVLNAIDVLKQKLDAVRLSEDTVEADDQFGELGAHM 315
>ref|XP_006853170.1| hypothetical protein AMTR_s00038p00194050 [Amborella trichopoda]
gi|548856809|gb|ERN14637.1| hypothetical protein
AMTR_s00038p00194050 [Amborella trichopoda]
Length = 324
Score = 154 bits (390), Expect = 9e-36
Identities = 78/114 (68%), Positives = 94/114 (82%), Gaps = 3/114 (2%)
Frame = +1
Query: 1 TLTLEEKQAWVESSPTKVFVIDPNTQQVEVNDPEAYTYEDEVLKKAEAMGKPGLIEIFPK 180
TL+L+EK+ WVESSPT+VF IDPNT QV V DPEAYTY+DEV+KKAEAMGKPGL+EI+ +
Sbjct: 206 TLSLDEKREWVESSPTRVFDIDPNTHQVVVVDPEAYTYDDEVIKKAEAMGKPGLVEIYAR 265
Query: 181 ENSFIFTVESTGAIKASQMLLNAINVLKQKLDDIRCSHDDA---SDMNELTSHL 333
E+SFIFTVESTGAIKASQ+++NAI VLKQKLD +R S D EL +H+
Sbjct: 266 EDSFIFTVESTGAIKASQLVINAIEVLKQKLDAVRLSLDTEEGDEQFGELGAHM 319
>ref|XP_003576823.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A-like
[Brachypodium distachyon]
Length = 330
Score = 154 bits (390), Expect = 9e-36
Identities = 78/113 (69%), Positives = 93/113 (82%)
Frame = +1
Query: 1 TLTLEEKQAWVESSPTKVFVIDPNTQQVEVNDPEAYTYEDEVLKKAEAMGKPGLIEIFPK 180
TLTLEEK +WVESSPTKVF IDPNTQQV V D EAYTY+DEV+KKAEAMGKPGLIEI K
Sbjct: 218 TLTLEEKTSWVESSPTKVFDIDPNTQQVVVVDREAYTYDDEVIKKAEAMGKPGLIEISAK 277
Query: 181 ENSFIFTVESTGAIKASQMLLNAINVLKQKLDDIRCSHDDASDMNELTSHLGI 339
E+SF+FTVE+TGAI A ++++NAI VL+QKLD +R +D D L +HLG+
Sbjct: 278 EDSFVFTVETTGAITAYELIINAITVLRQKLDAVRLQEED-GDFTGLDAHLGV 329
>gb|EMJ01858.1| hypothetical protein PRUPE_ppa016873mg [Prunus persica]
Length = 290
Score = 153 bits (387), Expect = 2e-35
Identities = 79/113 (69%), Positives = 94/113 (83%), Gaps = 3/113 (2%)
Frame = +1
Query: 4 LTLEEKQAWVESSPTKVFVIDPNTQQVEVNDPEAYTYEDEVLKKAEAMGKPGLIEIFPKE 183
LTL+EK+AWVESSPTKVF DP T++V V DPEAYTY+DEV+KKAEAMGKPGL++I KE
Sbjct: 175 LTLDEKKAWVESSPTKVFDFDPKTEKVVVVDPEAYTYDDEVIKKAEAMGKPGLVDIIAKE 234
Query: 184 NSFIFTVESTGAIKASQMLLNAINVLKQKLDDIRCSHD--DASD-MNELTSHL 333
+SFIFTVESTGA+KASQ+LLNAI VL QKLD +R S D +A D EL +H+
Sbjct: 235 DSFIFTVESTGAVKASQLLLNAIEVLNQKLDAVRLSEDTVEADDQFGELGAHM 287
>ref|XP_006660419.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
[Oryza brachyantha]
Length = 330
Score = 153 bits (386), Expect = 3e-35
Identities = 78/111 (70%), Positives = 93/111 (83%)
Frame = +1
Query: 1 TLTLEEKQAWVESSPTKVFVIDPNTQQVEVNDPEAYTYEDEVLKKAEAMGKPGLIEIFPK 180
TLTL+EK++ VESSPTKVF IDPNTQQV V DPEAYTY+DEV+KKA+AMGKPGLIEI K
Sbjct: 218 TLTLDEKRSLVESSPTKVFNIDPNTQQVVVEDPEAYTYDDEVIKKADAMGKPGLIEINAK 277
Query: 181 ENSFIFTVESTGAIKASQMLLNAINVLKQKLDDIRCSHDDASDMNELTSHL 333
E+SFIFTVE+TGAI A +++NAI VL+QKLD +R DD D+ EL +HL
Sbjct: 278 EDSFIFTVETTGAITAYDLIMNAITVLRQKLDGVRLQDDD-GDLGELGAHL 327
>ref|XP_004505300.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A-like
[Cicer arietinum]
Length = 319
Score = 153 bits (386), Expect = 3e-35
Identities = 79/114 (69%), Positives = 96/114 (84%), Gaps = 3/114 (2%)
Frame = +1
Query: 1 TLTLEEKQAWVESSPTKVFVIDPNTQQVEVNDPEAYTYEDEVLKKAEAMGKPGLIEIFPK 180
+LTLEEK+ WV+SSPT+VF IDP TQQV V DPEAY+Y+DEV+KKAEAMGKPGL+EI K
Sbjct: 203 SLTLEEKREWVDSSPTRVFDIDPVTQQVMVVDPEAYSYDDEVIKKAEAMGKPGLVEITAK 262
Query: 181 ENSFIFTVESTGAIKASQMLLNAINVLKQKLDDIRCSHD--DASD-MNELTSHL 333
++SFIFTVESTGA+KASQ+LLNAI +LKQKLD +R S D +A D EL +H+
Sbjct: 263 QDSFIFTVESTGAVKASQLLLNAIEILKQKLDAVRLSEDTVEADDQFGELGAHM 316
>gb|EMT18475.1| DNA-directed RNA polymerase II subunit RPB3-A [Aegilops tauschii]
Length = 255
Score = 152 bits (385), Expect = 3e-35
Identities = 77/111 (69%), Positives = 93/111 (83%)
Frame = +1
Query: 1 TLTLEEKQAWVESSPTKVFVIDPNTQQVEVNDPEAYTYEDEVLKKAEAMGKPGLIEIFPK 180
TLTLEEKQ+WVESSPTKVF IDP TQQV + D EAYTY+DEV+KKAEAMGKPGL+EI K
Sbjct: 143 TLTLEEKQSWVESSPTKVFDIDPVTQQVTIVDLEAYTYDDEVIKKAEAMGKPGLVEINAK 202
Query: 181 ENSFIFTVESTGAIKASQMLLNAINVLKQKLDDIRCSHDDASDMNELTSHL 333
E+SF+FTVE+TGAI A ++++NAI +L+QKLD IR DD D+ EL +HL
Sbjct: 203 EDSFVFTVETTGAITAYELIMNAITILRQKLDAIRLQDDD-GDLAELDAHL 252
>ref|XP_003556247.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
[Glycine max]
Length = 320
Score = 152 bits (385), Expect = 3e-35
Identities = 79/114 (69%), Positives = 95/114 (83%), Gaps = 3/114 (2%)
Frame = +1
Query: 1 TLTLEEKQAWVESSPTKVFVIDPNTQQVEVNDPEAYTYEDEVLKKAEAMGKPGLIEIFPK 180
TLTLEEK+ WV+SSPT+VF IDP TQQV V D EAYTY+DEVLKKAEAMGKPGL+EI +
Sbjct: 204 TLTLEEKREWVDSSPTRVFEIDPVTQQVMVVDAEAYTYDDEVLKKAEAMGKPGLVEIIAR 263
Query: 181 ENSFIFTVESTGAIKASQMLLNAINVLKQKLDDIRCSHD--DASD-MNELTSHL 333
++SFIFTVESTGA+KASQ++LNAI +LKQKLD +R S D +A D EL +H+
Sbjct: 264 QDSFIFTVESTGAVKASQLVLNAIEILKQKLDAVRLSEDTVEADDQFGELGAHM 317
>ref|XP_003529425.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3
[Glycine max]
Length = 319
Score = 152 bits (385), Expect = 3e-35
Identities = 79/114 (69%), Positives = 95/114 (83%), Gaps = 3/114 (2%)
Frame = +1
Query: 1 TLTLEEKQAWVESSPTKVFVIDPNTQQVEVNDPEAYTYEDEVLKKAEAMGKPGLIEIFPK 180
TLTLEEK+ WV+SSPT+VF IDP TQQV V D EAYTY+DEVLKKAEAMGKPGL+EI +
Sbjct: 203 TLTLEEKREWVDSSPTRVFEIDPVTQQVMVVDAEAYTYDDEVLKKAEAMGKPGLVEIIAR 262
Query: 181 ENSFIFTVESTGAIKASQMLLNAINVLKQKLDDIRCSHD--DASD-MNELTSHL 333
++SFIFTVESTGA+KASQ++LNAI +LKQKLD +R S D +A D EL +H+
Sbjct: 263 QDSFIFTVESTGAVKASQLVLNAIEILKQKLDAVRLSEDTVEADDQFGELGAHM 316
>ref|XP_003607895.1| DNA-directed RNA polymerase II subunit RPB3-A [Medicago truncatula]
gi|85719360|gb|ABC75365.1| RNA polymerase, dimerisation
[Medicago truncatula] gi|355508950|gb|AES90092.1|
DNA-directed RNA polymerase II subunit RPB3-A [Medicago
truncatula]
Length = 318
Score = 152 bits (384), Expect = 4e-35
Identities = 79/114 (69%), Positives = 96/114 (84%), Gaps = 3/114 (2%)
Frame = +1
Query: 1 TLTLEEKQAWVESSPTKVFVIDPNTQQVEVNDPEAYTYEDEVLKKAEAMGKPGLIEIFPK 180
+LTLEEK+ WV+SSPT+VF IDP TQQV V DPEAY+Y+DEV+KKAEAMGKPGLIEI K
Sbjct: 202 SLTLEEKKEWVDSSPTRVFDIDPVTQQVMVVDPEAYSYDDEVIKKAEAMGKPGLIEITAK 261
Query: 181 ENSFIFTVESTGAIKASQMLLNAINVLKQKLDDIRCSHD--DASD-MNELTSHL 333
++SFIFTVESTGA+KASQ+LLN+I +LKQKLD +R S D +A D EL +H+
Sbjct: 262 QDSFIFTVESTGAVKASQLLLNSIEILKQKLDAVRLSEDTVEADDQFGELGAHM 315