BLASTX nr result
ID: Zingiber24_contig00049849
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00049849
(388 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001044362.1| Os01g0767700 [Oryza sativa Japonica Group] g... 104 1e-20
gb|EEC71544.1| hypothetical protein OsI_03881 [Oryza sativa Indi... 104 1e-20
ref|XP_002456402.1| hypothetical protein SORBIDRAFT_03g035700 [S... 104 1e-20
gb|AFW84953.1| hypothetical protein ZEAMMB73_997107 [Zea mays] 99 8e-19
ref|XP_004970095.1| PREDICTED: probable ATP-dependent RNA helica... 93 3e-17
ref|XP_002278608.2| PREDICTED: probable ATP-dependent RNA helica... 92 5e-17
emb|CBI22072.3| unnamed protein product [Vitis vinifera] 92 5e-17
ref|XP_003567152.1| PREDICTED: probable ATP-dependent RNA helica... 91 1e-16
ref|XP_004243616.1| PREDICTED: probable ATP-dependent RNA helica... 89 8e-16
ref|XP_006366627.1| PREDICTED: probable ATP-dependent RNA helica... 88 1e-15
ref|XP_002307569.2| NUCLEAR DEIH-BOXHELICASE family protein [Pop... 86 4e-15
gb|EXB53675.1| putative ATP-dependent RNA helicase YTHDC2 [Morus... 86 7e-15
ref|XP_006853352.1| hypothetical protein AMTR_s00032p00104970 [A... 84 1e-14
gb|EMT33407.1| Putative ATP-dependent RNA helicase YTHDC2 [Aegil... 84 1e-14
gb|EOX93089.1| ATP-dependent RNA helicase, putative isoform 2 [T... 84 2e-14
gb|EOX93088.1| ATP-dependent RNA helicase, putative isoform 1 [T... 84 2e-14
ref|XP_006410180.1| hypothetical protein EUTSA_v10016152mg [Eutr... 83 3e-14
gb|AAB01660.1| putative RNA helicase A [Arabidopsis thaliana] 83 4e-14
dbj|BAE98834.1| hypothetical protein [Arabidopsis thaliana] 83 4e-14
ref|NP_850154.2| protein helicase in vascular tissue and tapetum... 83 4e-14
>ref|NP_001044362.1| Os01g0767700 [Oryza sativa Japonica Group]
gi|53792445|dbj|BAD53353.1| putative DEIH-box RNA/DNA
helicase [Oryza sativa Japonica Group]
gi|53793557|dbj|BAD53327.1| putative DEIH-box RNA/DNA
helicase [Oryza sativa Japonica Group]
gi|113533893|dbj|BAF06276.1| Os01g0767700 [Oryza sativa
Japonica Group]
Length = 1223
Score = 104 bits (260), Expect = 1e-20
Identities = 50/76 (65%), Positives = 63/76 (82%)
Frame = +3
Query: 147 VTESSRVRISKTLEEFRGSQAEVYTFEPGLSKEERAVIHIMCRKMGMLSKSSGRGERRCL 326
V E++ VR+SK LE+F+ S A+VY FEPG+SK+ERA IH MCRKMGM+SKSSG GERRCL
Sbjct: 43 VREATLVRVSKVLEDFQASDAQVYKFEPGISKQERAAIHEMCRKMGMISKSSGNGERRCL 102
Query: 327 SVYKNKKENASIKKEE 374
SVYK +K+N ++ EE
Sbjct: 103 SVYK-RKQNQGLETEE 117
>gb|EEC71544.1| hypothetical protein OsI_03881 [Oryza sativa Indica Group]
Length = 1277
Score = 104 bits (260), Expect = 1e-20
Identities = 50/76 (65%), Positives = 63/76 (82%)
Frame = +3
Query: 147 VTESSRVRISKTLEEFRGSQAEVYTFEPGLSKEERAVIHIMCRKMGMLSKSSGRGERRCL 326
V E++ VR+SK LE+F+ S A+VY FEPG+SK+ERA IH MCRKMGM+SKSSG GERRCL
Sbjct: 123 VREATLVRVSKVLEDFQASDAQVYKFEPGISKQERAAIHEMCRKMGMISKSSGNGERRCL 182
Query: 327 SVYKNKKENASIKKEE 374
SVYK +K+N ++ EE
Sbjct: 183 SVYK-RKQNQGLETEE 197
>ref|XP_002456402.1| hypothetical protein SORBIDRAFT_03g035700 [Sorghum bicolor]
gi|241928377|gb|EES01522.1| hypothetical protein
SORBIDRAFT_03g035700 [Sorghum bicolor]
Length = 1299
Score = 104 bits (259), Expect = 1e-20
Identities = 48/66 (72%), Positives = 58/66 (87%)
Frame = +3
Query: 153 ESSRVRISKTLEEFRGSQAEVYTFEPGLSKEERAVIHIMCRKMGMLSKSSGRGERRCLSV 332
E++ VR+SK LE+FR S AEVYTFEPG+S++ERA IH MCRKMGMLSKSSG GE+RCLSV
Sbjct: 129 EATLVRVSKVLEDFRASNAEVYTFEPGISRQERAAIHQMCRKMGMLSKSSGNGEKRCLSV 188
Query: 333 YKNKKE 350
YK K++
Sbjct: 189 YKRKQK 194
>gb|AFW84953.1| hypothetical protein ZEAMMB73_997107 [Zea mays]
Length = 985
Score = 98.6 bits (244), Expect = 8e-19
Identities = 47/66 (71%), Positives = 56/66 (84%)
Frame = +3
Query: 153 ESSRVRISKTLEEFRGSQAEVYTFEPGLSKEERAVIHIMCRKMGMLSKSSGRGERRCLSV 332
E++ VR+SK LE+FR S AEVYTFEP +SK+ERA IH MCRKMGM+SKSSG GERR LSV
Sbjct: 100 EATLVRVSKALEDFRASNAEVYTFEPDISKQERAAIHEMCRKMGMISKSSGNGERRRLSV 159
Query: 333 YKNKKE 350
YK K++
Sbjct: 160 YKRKQK 165
>ref|XP_004970095.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Setaria
italica]
Length = 1197
Score = 93.2 bits (230), Expect = 3e-17
Identities = 46/75 (61%), Positives = 57/75 (76%)
Frame = +3
Query: 147 VTESSRVRISKTLEEFRGSQAEVYTFEPGLSKEERAVIHIMCRKMGMLSKSSGRGERRCL 326
V E++ VR+SK LE+FR S AEVYTFEP +S+ ER IH MCRKMGM SKSSG GE+R L
Sbjct: 19 VREATLVRVSKVLEDFRASDAEVYTFEPDISRLERGAIHQMCRKMGMTSKSSGFGEQRRL 78
Query: 327 SVYKNKKENASIKKE 371
SVYK+K++ +E
Sbjct: 79 SVYKSKRKQGPAMEE 93
>ref|XP_002278608.2| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Vitis
vinifera]
Length = 1231
Score = 92.4 bits (228), Expect = 5e-17
Identities = 47/80 (58%), Positives = 58/80 (72%)
Frame = +3
Query: 147 VTESSRVRISKTLEEFRGSQAEVYTFEPGLSKEERAVIHIMCRKMGMLSKSSGRGERRCL 326
V E +R+RIS+ L+EFR + EVYTFE L+ ERAV+H +CRKMGM SKSSGRG +R +
Sbjct: 19 VAEGTRIRISRALQEFRETHNEVYTFEANLTNHERAVVHEVCRKMGMTSKSSGRGSQRRV 78
Query: 327 SVYKNKKENASIKKEEFTTY 386
SVYK KK+ KKEE Y
Sbjct: 79 SVYKTKKK-VDTKKEEGNPY 97
>emb|CBI22072.3| unnamed protein product [Vitis vinifera]
Length = 1190
Score = 92.4 bits (228), Expect = 5e-17
Identities = 47/80 (58%), Positives = 58/80 (72%)
Frame = +3
Query: 147 VTESSRVRISKTLEEFRGSQAEVYTFEPGLSKEERAVIHIMCRKMGMLSKSSGRGERRCL 326
V E +R+RIS+ L+EFR + EVYTFE L+ ERAV+H +CRKMGM SKSSGRG +R +
Sbjct: 19 VAEGTRIRISRALQEFRETHNEVYTFEANLTNHERAVVHEVCRKMGMTSKSSGRGSQRRV 78
Query: 327 SVYKNKKENASIKKEEFTTY 386
SVYK KK+ KKEE Y
Sbjct: 79 SVYKTKKK-VDTKKEEGNPY 97
>ref|XP_003567152.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 [Brachypodium
distachyon]
Length = 1272
Score = 91.3 bits (225), Expect = 1e-16
Identities = 43/75 (57%), Positives = 56/75 (74%)
Frame = +3
Query: 147 VTESSRVRISKTLEEFRGSQAEVYTFEPGLSKEERAVIHIMCRKMGMLSKSSGRGERRCL 326
++E + VR++ LEEFR S A+V+TFE +SK+ERA IH +CRKMGM+SKS G ERRCL
Sbjct: 93 LSEETLVRVTTVLEEFRASDAQVHTFEANISKQERAAIHEICRKMGMISKSKGYAERRCL 152
Query: 327 SVYKNKKENASIKKE 371
SVYK K+ K+E
Sbjct: 153 SVYKRKQTQGPDKEE 167
>ref|XP_004243616.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Solanum
lycopersicum]
Length = 1199
Score = 88.6 bits (218), Expect = 8e-16
Identities = 39/76 (51%), Positives = 59/76 (77%)
Frame = +3
Query: 147 VTESSRVRISKTLEEFRGSQAEVYTFEPGLSKEERAVIHIMCRKMGMLSKSSGRGERRCL 326
V ES+R+R+++ LE+FR S EVYTFE LS +RA +H++CRKMGM SKSSGRG++R +
Sbjct: 30 VAESTRIRVAQVLEQFRVSNDEVYTFESNLSNRDRAAVHMLCRKMGMKSKSSGRGDQRRI 89
Query: 327 SVYKNKKENASIKKEE 374
S++K K+ ++K ++
Sbjct: 90 SIFKTKQNTDTMKGKD 105
>ref|XP_006366627.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Solanum
tuberosum]
Length = 1205
Score = 87.8 bits (216), Expect = 1e-15
Identities = 38/76 (50%), Positives = 59/76 (77%)
Frame = +3
Query: 147 VTESSRVRISKTLEEFRGSQAEVYTFEPGLSKEERAVIHIMCRKMGMLSKSSGRGERRCL 326
V ES+++R+++ LE+FR S EVYTFE LS +RA +H++CRKMGM SKSSGRG++R +
Sbjct: 28 VAESTQIRVAQVLEQFRASNDEVYTFESNLSNRDRAAVHMLCRKMGMKSKSSGRGDQRRI 87
Query: 327 SVYKNKKENASIKKEE 374
S++K K+ ++K ++
Sbjct: 88 SIFKTKQNMDTLKGKD 103
>ref|XP_002307569.2| NUCLEAR DEIH-BOXHELICASE family protein [Populus trichocarpa]
gi|550339560|gb|EEE94565.2| NUCLEAR DEIH-BOXHELICASE
family protein [Populus trichocarpa]
Length = 1207
Score = 86.3 bits (212), Expect = 4e-15
Identities = 43/80 (53%), Positives = 58/80 (72%)
Frame = +3
Query: 147 VTESSRVRISKTLEEFRGSQAEVYTFEPGLSKEERAVIHIMCRKMGMLSKSSGRGERRCL 326
V E++ +RISK LE FR + +VYTFE LS +RAV+H +C+KMGM SKSSGRG +R +
Sbjct: 29 VAEATLIRISKILERFRAAPDQVYTFEANLSNYDRAVVHEVCKKMGMKSKSSGRGGQRRV 88
Query: 327 SVYKNKKENASIKKEEFTTY 386
SVYKN K+ +K +E T+
Sbjct: 89 SVYKNTKKLDDVKGKENLTH 108
>gb|EXB53675.1| putative ATP-dependent RNA helicase YTHDC2 [Morus notabilis]
Length = 723
Score = 85.5 bits (210), Expect = 7e-15
Identities = 39/79 (49%), Positives = 57/79 (72%)
Frame = +3
Query: 147 VTESSRVRISKTLEEFRGSQAEVYTFEPGLSKEERAVIHIMCRKMGMLSKSSGRGERRCL 326
V+E + + I + L+ F+ S A+VYTFE G+S +ERA +H +CR+ GM SKSSGRG +RC+
Sbjct: 13 VSEGAGIHIRRALDRFQASNAKVYTFEAGMSNQERAFVHDLCRRRGMKSKSSGRGNQRCV 72
Query: 327 SVYKNKKENASIKKEEFTT 383
+V+KNKK+ K+ E T
Sbjct: 73 AVFKNKKKAEDNKELEGVT 91
>ref|XP_006853352.1| hypothetical protein AMTR_s00032p00104970 [Amborella trichopoda]
gi|548857005|gb|ERN14819.1| hypothetical protein
AMTR_s00032p00104970 [Amborella trichopoda]
Length = 1198
Score = 84.3 bits (207), Expect = 1e-14
Identities = 40/76 (52%), Positives = 54/76 (71%)
Frame = +3
Query: 147 VTESSRVRISKTLEEFRGSQAEVYTFEPGLSKEERAVIHIMCRKMGMLSKSSGRGERRCL 326
V E SR++I +TLEEF VYTF+ L KEERA +H + R+MG++SKSSG G+RRC+
Sbjct: 15 VGEESRIKILRTLEEFCAGNDIVYTFDADLDKEERAEVHFVSRRMGLVSKSSGHGDRRCV 74
Query: 327 SVYKNKKENASIKKEE 374
SV+K A +KK+E
Sbjct: 75 SVHKQSNGKAQMKKKE 90
>gb|EMT33407.1| Putative ATP-dependent RNA helicase YTHDC2 [Aegilops tauschii]
Length = 1297
Score = 84.3 bits (207), Expect = 1e-14
Identities = 43/98 (43%), Positives = 58/98 (59%), Gaps = 23/98 (23%)
Frame = +3
Query: 147 VTESSRVRISKTLEEFRGSQAEV-----------------------YTFEPGLSKEERAV 257
++E + VRI+ LE+FR S A+V +TFEP L+ +ERA
Sbjct: 24 MSEETTVRITTVLEDFRASDAQVLSRPPIFSAMDLLVVSFATSTAVHTFEPSLTNQERAA 83
Query: 258 IHIMCRKMGMLSKSSGRGERRCLSVYKNKKENASIKKE 371
+H MC+KMGM+SKS G GERRCLSVYK K ++K+E
Sbjct: 84 VHAMCKKMGMISKSKGYGERRCLSVYKTKNTQGAVKEE 121
>gb|EOX93089.1| ATP-dependent RNA helicase, putative isoform 2 [Theobroma cacao]
Length = 1181
Score = 84.0 bits (206), Expect = 2e-14
Identities = 42/79 (53%), Positives = 60/79 (75%)
Frame = +3
Query: 147 VTESSRVRISKTLEEFRGSQAEVYTFEPGLSKEERAVIHIMCRKMGMLSKSSGRGERRCL 326
V ES+R+++++TLE+FR S+ EVYTF+ LS +ERA++H CRKMGM SKSSGRG +R +
Sbjct: 7 VAESTRIQLAQTLEKFRESKDEVYTFDSTLSNKERALVHRACRKMGMKSKSSGRGSQRRI 66
Query: 327 SVYKNKKENASIKKEEFTT 383
SVYK + + ++K E T
Sbjct: 67 SVYKIRGKVDNMKGMESLT 85
>gb|EOX93088.1| ATP-dependent RNA helicase, putative isoform 1 [Theobroma cacao]
gi|508701194|gb|EOX93090.1| ATP-dependent RNA helicase,
putative isoform 1 [Theobroma cacao]
Length = 1207
Score = 84.0 bits (206), Expect = 2e-14
Identities = 42/79 (53%), Positives = 60/79 (75%)
Frame = +3
Query: 147 VTESSRVRISKTLEEFRGSQAEVYTFEPGLSKEERAVIHIMCRKMGMLSKSSGRGERRCL 326
V ES+R+++++TLE+FR S+ EVYTF+ LS +ERA++H CRKMGM SKSSGRG +R +
Sbjct: 7 VAESTRIQLAQTLEKFRESKDEVYTFDSTLSNKERALVHRACRKMGMKSKSSGRGSQRRI 66
Query: 327 SVYKNKKENASIKKEEFTT 383
SVYK + + ++K E T
Sbjct: 67 SVYKIRGKVDNMKGMESLT 85
>ref|XP_006410180.1| hypothetical protein EUTSA_v10016152mg [Eutrema salsugineum]
gi|557111349|gb|ESQ51633.1| hypothetical protein
EUTSA_v10016152mg [Eutrema salsugineum]
Length = 1305
Score = 83.2 bits (204), Expect = 3e-14
Identities = 40/72 (55%), Positives = 53/72 (73%)
Frame = +3
Query: 153 ESSRVRISKTLEEFRGSQAEVYTFEPGLSKEERAVIHIMCRKMGMLSKSSGRGERRCLSV 332
E++R+ SK +E+FR S EVYTFE LS ER VIH MCRKMG+ SKS+GRG++R LS+
Sbjct: 18 EATRIWASKVIEDFRASGNEVYTFEHNLSNSERGVIHQMCRKMGIQSKSAGRGDQRRLSI 77
Query: 333 YKNKKENASIKK 368
+K+K N K+
Sbjct: 78 FKSKHRNGKNKE 89
>gb|AAB01660.1| putative RNA helicase A [Arabidopsis thaliana]
Length = 1291
Score = 82.8 bits (203), Expect = 4e-14
Identities = 39/69 (56%), Positives = 53/69 (76%)
Frame = +3
Query: 153 ESSRVRISKTLEEFRGSQAEVYTFEPGLSKEERAVIHIMCRKMGMLSKSSGRGERRCLSV 332
E++R+ +K +E+FR S EVYTFE LS ER VIH MCRKMG+ SKSSGRGE+R LS+
Sbjct: 19 EATRIWATKVIEDFRASGNEVYTFEHNLSNNERGVIHQMCRKMGIQSKSSGRGEQRRLSI 78
Query: 333 YKNKKENAS 359
+K++ +N +
Sbjct: 79 FKSRHKNGN 87
>dbj|BAE98834.1| hypothetical protein [Arabidopsis thaliana]
Length = 636
Score = 82.8 bits (203), Expect = 4e-14
Identities = 39/69 (56%), Positives = 53/69 (76%)
Frame = +3
Query: 153 ESSRVRISKTLEEFRGSQAEVYTFEPGLSKEERAVIHIMCRKMGMLSKSSGRGERRCLSV 332
E++R+ +K +E+FR S EVYTFE LS ER VIH MCRKMG+ SKSSGRGE+R LS+
Sbjct: 19 EATRIWATKVIEDFRASGNEVYTFEHNLSNNERGVIHQMCRKMGIQSKSSGRGEQRRLSI 78
Query: 333 YKNKKENAS 359
+K++ +N +
Sbjct: 79 FKSRHKNGN 87
>ref|NP_850154.2| protein helicase in vascular tissue and tapetum [Arabidopsis
thaliana] gi|330253348|gb|AEC08442.1| protein helicase
in vascular tissue and tapetum [Arabidopsis thaliana]
Length = 1299
Score = 82.8 bits (203), Expect = 4e-14
Identities = 39/69 (56%), Positives = 53/69 (76%)
Frame = +3
Query: 153 ESSRVRISKTLEEFRGSQAEVYTFEPGLSKEERAVIHIMCRKMGMLSKSSGRGERRCLSV 332
E++R+ +K +E+FR S EVYTFE LS ER VIH MCRKMG+ SKSSGRGE+R LS+
Sbjct: 19 EATRIWATKVIEDFRASGNEVYTFEHNLSNNERGVIHQMCRKMGIQSKSSGRGEQRRLSI 78
Query: 333 YKNKKENAS 359
+K++ +N +
Sbjct: 79 FKSRHKNGN 87