BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00049803
         (382 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFB18352.1| RNA polymerase beta subunit, partial [Renealmia a...   132   6e-29
gb|AFB18357.1| RNA polymerase beta subunit, partial [Tradescanti...   129   4e-28
ref|YP_008854586.1| RNA polymerase beta subunit [Curcuma roscoea...   128   7e-28
ref|YP_007475696.1| RNA polymerase beta subunit [Zingiber specta...   128   7e-28
gb|AFB18324.1| RNA polymerase beta subunit, partial [Belosynapsi...   127   1e-27
gb|AFB18349.1| RNA polymerase beta subunit, partial [Pitcairnia ...   127   2e-27
gb|AFB18346.1| RNA polymerase beta subunit, partial [Neoregelia ...   127   2e-27
gb|AFB18334.1| RNA polymerase beta subunit, partial [Fosterella ...   127   2e-27
gb|AGE93362.1| RNA polymerase beta subunit [Alpinia zerumbet]         126   3e-27
gb|AFB18353.1| RNA polymerase beta subunit, partial [Sparganium ...   125   6e-27
gb|AFB18344.1| RNA polymerase beta subunit, partial [Navia saxic...   125   6e-27
gb|AFB18325.1| RNA polymerase beta subunit, partial [Brocchinia ...   124   1e-26
gb|AHA13174.1| RNA polymerase beta subunit [Thaumatococcus danie...   123   3e-26
ref|YP_008854417.1| RNA polymerase beta subunit [Musa textilis] ...   123   3e-26
emb|CCW72367.1| rpoB (chloroplast) [Musa acuminata subsp. malacc...   123   3e-26
ref|YP_007475611.1| RNA polymerase beta subunit [Heliconia colli...   123   3e-26
gb|AFB18350.1| RNA polymerase beta subunit, partial [Potarophytu...   122   6e-26
gb|AFB18356.1| RNA polymerase beta subunit [Thamnochortus insignis]   120   2e-25
gb|AAW82495.1| RNA polymerase beta chain [Phalaenopsis aphrodite...   120   2e-25
ref|YP_006073260.1| RNA polymerase beta subunit (chloroplast) [P...   120   2e-25

>gb|AFB18352.1| RNA polymerase beta subunit, partial [Renealmia alpinia]
          Length = 1078

 Score =  132 bits (331), Expect = 6e-29
 Identities = 61/62 (98%), Positives = 62/62 (100%)
 Frame = -1

Query: 187 KIKMLWNDGNEGMSTIPGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEIEFKLFVER 8
           KIKMLW+DGNEGMSTIPGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEIEFKLFVER
Sbjct: 3   KIKMLWDDGNEGMSTIPGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEIEFKLFVER 62

Query: 7   YQ 2
           YQ
Sbjct: 63  YQ 64


>gb|AFB18357.1| RNA polymerase beta subunit, partial [Tradescantia ohiensis]
          Length = 1083

 Score =  129 bits (324), Expect = 4e-28
 Identities = 63/69 (91%), Positives = 65/69 (94%)
 Frame = -1

Query: 208 FSIKGKLKIKMLWNDGNEGMSTIPGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEIE 29
           FSIK KLKIKML NDGNEGMSTIPGFSQIQFEGFCRFI++GL EEF KFPKIEDTDQEIE
Sbjct: 1   FSIKRKLKIKMLRNDGNEGMSTIPGFSQIQFEGFCRFIDKGLGEEFQKFPKIEDTDQEIE 60

Query: 28  FKLFVERYQ 2
           FKLFVERYQ
Sbjct: 61  FKLFVERYQ 69


>ref|YP_008854586.1| RNA polymerase beta subunit [Curcuma roscoeana]
           gi|557637493|gb|AHA13088.1| RNA polymerase beta subunit
           [Curcuma roscoeana]
          Length = 1082

 Score =  128 bits (322), Expect = 7e-28
 Identities = 59/59 (100%), Positives = 59/59 (100%)
 Frame = -1

Query: 178 MLWNDGNEGMSTIPGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEIEFKLFVERYQ 2
           MLWNDGNEGMSTIPGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEIEFKLFVERYQ
Sbjct: 1   MLWNDGNEGMSTIPGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEIEFKLFVERYQ 59


>ref|YP_007475696.1| RNA polymerase beta subunit [Zingiber spectabile]
           gi|449326176|gb|AGE92761.1| RNA polymerase beta subunit
           [Zingiber spectabile]
          Length = 1075

 Score =  128 bits (322), Expect = 7e-28
 Identities = 59/59 (100%), Positives = 59/59 (100%)
 Frame = -1

Query: 178 MLWNDGNEGMSTIPGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEIEFKLFVERYQ 2
           MLWNDGNEGMSTIPGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEIEFKLFVERYQ
Sbjct: 1   MLWNDGNEGMSTIPGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEIEFKLFVERYQ 59


>gb|AFB18324.1| RNA polymerase beta subunit, partial [Belosynapsis ciliata]
          Length = 1085

 Score =  127 bits (320), Expect = 1e-27
 Identities = 62/69 (89%), Positives = 64/69 (92%)
 Frame = -1

Query: 208 FSIKGKLKIKMLWNDGNEGMSTIPGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEIE 29
           F IK KLKIKML NDGNEGMSTIPGFSQIQFEGFCRFI++GL EEF KFPKIEDTDQEIE
Sbjct: 3   FLIKRKLKIKMLRNDGNEGMSTIPGFSQIQFEGFCRFIDKGLAEEFQKFPKIEDTDQEIE 62

Query: 28  FKLFVERYQ 2
           FKLFVERYQ
Sbjct: 63  FKLFVERYQ 71


>gb|AFB18349.1| RNA polymerase beta subunit, partial [Pitcairnia feliciana]
          Length = 1085

 Score =  127 bits (318), Expect = 2e-27
 Identities = 63/69 (91%), Positives = 64/69 (92%)
 Frame = -1

Query: 208 FSIKGKLKIKMLWNDGNEGMSTIPGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEIE 29
           FSI  KLKIKML N GNEGMSTIPGFSQIQFEGFCRFIN+GLTEEFHKFPKIEDTDQEIE
Sbjct: 4   FSINRKLKIKMLRN-GNEGMSTIPGFSQIQFEGFCRFINQGLTEEFHKFPKIEDTDQEIE 62

Query: 28  FKLFVERYQ 2
           FKLF ERYQ
Sbjct: 63  FKLFAERYQ 71


>gb|AFB18346.1| RNA polymerase beta subunit, partial [Neoregelia carolinae]
          Length = 1085

 Score =  127 bits (318), Expect = 2e-27
 Identities = 63/69 (91%), Positives = 64/69 (92%)
 Frame = -1

Query: 208 FSIKGKLKIKMLWNDGNEGMSTIPGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEIE 29
           FSI  KLKIKML N GNEGMSTIPGFSQIQFEGFCRFIN+GLTEEFHKFPKIEDTDQEIE
Sbjct: 4   FSINRKLKIKMLRN-GNEGMSTIPGFSQIQFEGFCRFINQGLTEEFHKFPKIEDTDQEIE 62

Query: 28  FKLFVERYQ 2
           FKLF ERYQ
Sbjct: 63  FKLFAERYQ 71


>gb|AFB18334.1| RNA polymerase beta subunit, partial [Fosterella caulescens]
          Length = 1082

 Score =  127 bits (318), Expect = 2e-27
 Identities = 63/69 (91%), Positives = 64/69 (92%)
 Frame = -1

Query: 208 FSIKGKLKIKMLWNDGNEGMSTIPGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEIE 29
           FSI  KLKIKML N GNEGMSTIPGFSQIQFEGFCRFIN+GLTEEFHKFPKIEDTDQEIE
Sbjct: 1   FSINRKLKIKMLRN-GNEGMSTIPGFSQIQFEGFCRFINQGLTEEFHKFPKIEDTDQEIE 59

Query: 28  FKLFVERYQ 2
           FKLF ERYQ
Sbjct: 60  FKLFAERYQ 68


>gb|AGE93362.1| RNA polymerase beta subunit [Alpinia zerumbet]
          Length = 1073

 Score =  126 bits (317), Expect = 3e-27
 Identities = 58/59 (98%), Positives = 59/59 (100%)
 Frame = -1

Query: 178 MLWNDGNEGMSTIPGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEIEFKLFVERYQ 2
           MLW+DGNEGMSTIPGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEIEFKLFVERYQ
Sbjct: 1   MLWDDGNEGMSTIPGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEIEFKLFVERYQ 59


>gb|AFB18353.1| RNA polymerase beta subunit, partial [Sparganium eurycarpum]
          Length = 1083

 Score =  125 bits (314), Expect = 6e-27
 Identities = 63/69 (91%), Positives = 64/69 (92%)
 Frame = -1

Query: 208 FSIKGKLKIKMLWNDGNEGMSTIPGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEIE 29
           FSI  KLKIKML N GNEGMSTIPGFSQIQFEGFCRFIN+GLTEEF KFPKIEDTDQEIE
Sbjct: 2   FSINRKLKIKMLRN-GNEGMSTIPGFSQIQFEGFCRFINQGLTEEFQKFPKIEDTDQEIE 60

Query: 28  FKLFVERYQ 2
           FKLFVERYQ
Sbjct: 61  FKLFVERYQ 69


>gb|AFB18344.1| RNA polymerase beta subunit, partial [Navia saxicola]
          Length = 1087

 Score =  125 bits (314), Expect = 6e-27
 Identities = 62/69 (89%), Positives = 64/69 (92%)
 Frame = -1

Query: 208 FSIKGKLKIKMLWNDGNEGMSTIPGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEIE 29
           FSI  KLKIKML N GNEGMSTIPGFSQIQFEGFCRFIN+GLTEEFHKFPKIEDTDQEIE
Sbjct: 4   FSINRKLKIKMLRN-GNEGMSTIPGFSQIQFEGFCRFINQGLTEEFHKFPKIEDTDQEIE 62

Query: 28  FKLFVERYQ 2
           F+LF ERYQ
Sbjct: 63  FQLFAERYQ 71


>gb|AFB18325.1| RNA polymerase beta subunit, partial [Brocchinia micrantha]
          Length = 1085

 Score =  124 bits (311), Expect = 1e-26
 Identities = 61/69 (88%), Positives = 64/69 (92%)
 Frame = -1

Query: 208 FSIKGKLKIKMLWNDGNEGMSTIPGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEIE 29
           FSI  KLKIKML N GNEGMSTIPGFSQIQFEGFCRFIN+GLTEEFHKFPK+EDTDQEIE
Sbjct: 4   FSINRKLKIKMLRN-GNEGMSTIPGFSQIQFEGFCRFINQGLTEEFHKFPKMEDTDQEIE 62

Query: 28  FKLFVERYQ 2
           F+LF ERYQ
Sbjct: 63  FQLFAERYQ 71


>gb|AHA13174.1| RNA polymerase beta subunit [Thaumatococcus daniellii]
          Length = 1070

 Score =  123 bits (308), Expect = 3e-26
 Identities = 58/59 (98%), Positives = 58/59 (98%)
 Frame = -1

Query: 178 MLWNDGNEGMSTIPGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEIEFKLFVERYQ 2
           ML NDGNEGMSTIPGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEIEFKLFVERYQ
Sbjct: 1   MLRNDGNEGMSTIPGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEIEFKLFVERYQ 59


>ref|YP_008854417.1| RNA polymerase beta subunit [Musa textilis]
           gi|557636904|gb|AHA12506.1| RNA polymerase beta subunit
           [Musa textilis]
          Length = 1074

 Score =  123 bits (308), Expect = 3e-26
 Identities = 58/59 (98%), Positives = 58/59 (98%)
 Frame = -1

Query: 178 MLWNDGNEGMSTIPGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEIEFKLFVERYQ 2
           ML NDGNEGMSTIPGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEIEFKLFVERYQ
Sbjct: 1   MLRNDGNEGMSTIPGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEIEFKLFVERYQ 59


>emb|CCW72367.1| rpoB (chloroplast) [Musa acuminata subsp. malaccensis]
          Length = 1074

 Score =  123 bits (308), Expect = 3e-26
 Identities = 58/59 (98%), Positives = 58/59 (98%)
 Frame = -1

Query: 178 MLWNDGNEGMSTIPGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEIEFKLFVERYQ 2
           ML NDGNEGMSTIPGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEIEFKLFVERYQ
Sbjct: 1   MLRNDGNEGMSTIPGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEIEFKLFVERYQ 59


>ref|YP_007475611.1| RNA polymerase beta subunit [Heliconia collinsiana]
           gi|449326090|gb|AGE92676.1| RNA polymerase beta subunit
           [Heliconia collinsiana]
          Length = 1083

 Score =  123 bits (308), Expect = 3e-26
 Identities = 58/59 (98%), Positives = 58/59 (98%)
 Frame = -1

Query: 178 MLWNDGNEGMSTIPGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEIEFKLFVERYQ 2
           ML NDGNEGMSTIPGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEIEFKLFVERYQ
Sbjct: 1   MLRNDGNEGMSTIPGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEIEFKLFVERYQ 59


>gb|AFB18350.1| RNA polymerase beta subunit, partial [Potarophytum riparium]
          Length = 1083

 Score =  122 bits (305), Expect = 6e-26
 Identities = 60/69 (86%), Positives = 62/69 (89%)
 Frame = -1

Query: 208 FSIKGKLKIKMLWNDGNEGMSTIPGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEIE 29
           FSI  KLKIKML N GNEGM TIPGFSQIQFEGFCRFIN+GL EEFHKFPKIEDTDQEIE
Sbjct: 2   FSINSKLKIKMLRN-GNEGMPTIPGFSQIQFEGFCRFINQGLPEEFHKFPKIEDTDQEIE 60

Query: 28  FKLFVERYQ 2
           F+LF ERYQ
Sbjct: 61  FQLFAERYQ 69


>gb|AFB18356.1| RNA polymerase beta subunit [Thamnochortus insignis]
          Length = 1077

 Score =  120 bits (301), Expect = 2e-25
 Identities = 58/69 (84%), Positives = 64/69 (92%)
 Frame = -1

Query: 208 FSIKGKLKIKMLWNDGNEGMSTIPGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEIE 29
           FSI  KLKIKML N  NEGMSTIPGF+QIQFEGFCRFIN+GLTEEFHKFPKIEDTDQE+E
Sbjct: 4   FSINSKLKIKMLRNQ-NEGMSTIPGFNQIQFEGFCRFINQGLTEEFHKFPKIEDTDQEVE 62

Query: 28  FKLFVERYQ 2
           F+LFVER++
Sbjct: 63  FQLFVERHR 71


>gb|AAW82495.1| RNA polymerase beta chain [Phalaenopsis aphrodite subsp. formosana]
          Length = 1091

 Score =  120 bits (300), Expect = 2e-25
 Identities = 60/69 (86%), Positives = 63/69 (91%)
 Frame = -1

Query: 208 FSIKGKLKIKMLWNDGNEGMSTIPGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEIE 29
           FSIK KL+IKML N GNEGMSTIPGFSQIQFEGFCRFIN+GLTEEFHKF KIED DQEIE
Sbjct: 12  FSIKRKLQIKMLQN-GNEGMSTIPGFSQIQFEGFCRFINQGLTEEFHKFQKIEDRDQEIE 70

Query: 28  FKLFVERYQ 2
           F+LFVE YQ
Sbjct: 71  FQLFVETYQ 79


>ref|YP_006073260.1| RNA polymerase beta subunit (chloroplast) [Phalaenopsis equestris]
           gi|329668864|gb|AEB96311.1| RNA polymerase beta subunit
           (chloroplast) [Phalaenopsis equestris]
          Length = 1091

 Score =  120 bits (300), Expect = 2e-25
 Identities = 60/69 (86%), Positives = 63/69 (91%)
 Frame = -1

Query: 208 FSIKGKLKIKMLWNDGNEGMSTIPGFSQIQFEGFCRFINEGLTEEFHKFPKIEDTDQEIE 29
           FSIK KL+IKML N GNEGMSTIPGFSQIQFEGFCRFIN+GLTEEFHKF KIED DQEIE
Sbjct: 12  FSIKRKLQIKMLQN-GNEGMSTIPGFSQIQFEGFCRFINQGLTEEFHKFQKIEDRDQEIE 70

Query: 28  FKLFVERYQ 2
           F+LFVE YQ
Sbjct: 71  FQLFVETYQ 79