BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00049730
         (253 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633446.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH...    61   1e-07
emb|CBI25341.3| unnamed protein product [Vitis vinifera]               61   1e-07
ref|XP_002520888.1| snf2 histone linker phd ring helicase, putat...    57   3e-06
ref|XP_004160739.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...    57   3e-06
ref|XP_004138388.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH...    57   3e-06
ref|XP_006842523.1| hypothetical protein AMTR_s00077p00115750 [A...    56   4e-06
gb|EOY20188.1| Zinc ion binding,DNA binding,helicases,ATP bindin...    56   4e-06
gb|EOY20187.1| Zinc ion binding,DNA binding,helicases,ATP bindin...    56   4e-06

>ref|XP_003633446.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like [Vitis vinifera]
          Length = 1704

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
 Frame = +2

Query: 8   EHSEFSQPIYIDIDCNNQGSTEHVDIAEVILNSVNKAGEIIDYGLIKARLNKLKFSLRFH 187
           E  +   P+++++D    GS EH+DI+E++LN +N   E   Y L +      K  LRF 
Sbjct: 40  EVGDAETPLFVEVDRTGWGSGEHLDISEIVLNDLNLREEFHGYSLGEGFYENSKCCLRFR 99

Query: 188 LCNVKR--SSFRLGQWPVLSA 244
           LCN  +     RLG WPV++A
Sbjct: 100 LCNANQFVGRIRLGHWPVVAA 120


>emb|CBI25341.3| unnamed protein product [Vitis vinifera]
          Length = 1717

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
 Frame = +2

Query: 8   EHSEFSQPIYIDIDCNNQGSTEHVDIAEVILNSVNKAGEIIDYGLIKARLNKLKFSLRFH 187
           E  +   P+++++D    GS EH+DI+E++LN +N   E   Y L +      K  LRF 
Sbjct: 40  EVGDAETPLFVEVDRTGWGSGEHLDISEIVLNDLNLREEFHGYSLGEGFYENSKCCLRFR 99

Query: 188 LCNVKR--SSFRLGQWPVLSA 244
           LCN  +     RLG WPV++A
Sbjct: 100 LCNANQFVGRIRLGHWPVVAA 120


>ref|XP_002520888.1| snf2 histone linker phd ring helicase, putative [Ricinus communis]
           gi|223540019|gb|EEF41597.1| snf2 histone linker phd ring
           helicase, putative [Ricinus communis]
          Length = 1588

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 4/78 (5%)
 Frame = +2

Query: 23  SQPIYIDIDCNNQGSTEHVDIAEVILNSVNKAGEIIDYGLIKARLN-KLKFSLRFHLCNV 199
           S+P Y+++D +N  S +H DI+EVILN +N  GE      IK+  + + K+SLR  +CNV
Sbjct: 44  SRPYYVEVDKSNWVSNDHFDISEVILNDLN-LGEAYSSCRIKSNFSQESKYSLRVRVCNV 102

Query: 200 K---RSSFRLGQWPVLSA 244
                   +LG WPVLS+
Sbjct: 103 DGFVLDRIKLGYWPVLSS 120


>ref|XP_004160739.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
           SHPRH-like [Cucumis sativus]
          Length = 1520

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
 Frame = +2

Query: 23  SQPIYIDIDCNNQGSTEHVDIAEVILNSVNKAGEIIDYGLIKARLNKLKFSLRFHLCNVK 202
           ++PI++++D +   S EH DI+EV L  V      + + L K+     ++SLRF LCNV 
Sbjct: 48  NEPIFVEVDRSGWYSNEHYDISEVFLADVRLEHPFVGFCLDKSVRENSRYSLRFRLCNVN 107

Query: 203 RS---SFRLGQWPVLSA 244
            S     + G WPVLS+
Sbjct: 108 GSLLDRIKFGHWPVLSS 124


>ref|XP_004138388.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like [Cucumis sativus]
          Length = 1520

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
 Frame = +2

Query: 23  SQPIYIDIDCNNQGSTEHVDIAEVILNSVNKAGEIIDYGLIKARLNKLKFSLRFHLCNVK 202
           ++PI++++D +   S EH DI+EV L  V      + + L K+     ++SLRF LCNV 
Sbjct: 48  NEPIFVEVDRSGWYSNEHYDISEVFLADVRLEHPFVGFCLDKSVRENSRYSLRFRLCNVN 107

Query: 203 RS---SFRLGQWPVLSA 244
            S     + G WPVLS+
Sbjct: 108 GSLLDRIKFGHWPVLSS 124


>ref|XP_006842523.1| hypothetical protein AMTR_s00077p00115750 [Amborella trichopoda]
           gi|548844609|gb|ERN04198.1| hypothetical protein
           AMTR_s00077p00115750 [Amborella trichopoda]
          Length = 1697

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 26/76 (34%), Positives = 43/76 (56%)
 Frame = +2

Query: 23  SQPIYIDIDCNNQGSTEHVDIAEVILNSVNKAGEIIDYGLIKARLNKLKFSLRFHLCNVK 202
           ++ ++++I+ NN  S E  D+AEV L ++  +    D+ LI+    KL +SL+   C   
Sbjct: 52  AKEVFVEINQNNSNSDEQFDVAEVFLGNIRFSNGFHDHNLIEEIYEKLDYSLQLRFCVGV 111

Query: 203 RSSFRLGQWPVLSAVN 250
               R+G WPV+SA N
Sbjct: 112 DDHIRIGHWPVISADN 127


>gb|EOY20188.1| Zinc ion binding,DNA binding,helicases,ATP binding,nucleic acid
           binding isoform 2 [Theobroma cacao]
          Length = 1666

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
 Frame = +2

Query: 5   KEHSEFSQPIYIDIDCNNQGSTEHVDIAEVILNSVNKAGEIIDYGLIKARLNKLKFSLRF 184
           +E  +  +P +++ID  +  S EH+DI+EV+L  +N       Y + +      K+SLRF
Sbjct: 41  EELVDTEKPFFVEIDKTSWHSDEHLDISEVVLIDLNLREGFAGYRISEDFYGDSKYSLRF 100

Query: 185 HLCNVKR--SSFRLGQWPVLSA 244
            +CNV    S  +LG WPVLS+
Sbjct: 101 RVCNVCEFISRIKLGHWPVLSS 122


>gb|EOY20187.1| Zinc ion binding,DNA binding,helicases,ATP binding,nucleic acid
           binding isoform 1 [Theobroma cacao]
          Length = 1682

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
 Frame = +2

Query: 5   KEHSEFSQPIYIDIDCNNQGSTEHVDIAEVILNSVNKAGEIIDYGLIKARLNKLKFSLRF 184
           +E  +  +P +++ID  +  S EH+DI+EV+L  +N       Y + +      K+SLRF
Sbjct: 41  EELVDTEKPFFVEIDKTSWHSDEHLDISEVVLIDLNLREGFAGYRISEDFYGDSKYSLRF 100

Query: 185 HLCNVKR--SSFRLGQWPVLSA 244
            +CNV    S  +LG WPVLS+
Sbjct: 101 RVCNVCEFISRIKLGHWPVLSS 122