BLASTX nr result
ID: Zingiber24_contig00049696
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00049696
(294 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containi... 104 1e-20
emb|CBI23556.3| unnamed protein product [Vitis vinifera] 104 1e-20
gb|EOY23498.1| Tetratricopeptide repeat-like superfamily protein... 102 5e-20
ref|XP_003634143.1| PREDICTED: pentatricopeptide repeat-containi... 101 9e-20
ref|XP_006290593.1| hypothetical protein CARUB_v10016682mg [Caps... 100 2e-19
ref|XP_006347856.1| PREDICTED: pentatricopeptide repeat-containi... 100 3e-19
ref|XP_004231236.1| PREDICTED: pentatricopeptide repeat-containi... 99 6e-19
ref|XP_006404168.1| hypothetical protein EUTSA_v10010119mg [Eutr... 99 8e-19
gb|AFW77542.1| putative pentatricopeptide repeat family protein ... 98 1e-18
ref|XP_006422178.1| hypothetical protein CICLE_v10006927mg [Citr... 97 2e-18
ref|XP_002321443.2| hypothetical protein POPTR_0015s02060g [Popu... 97 2e-18
ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arab... 96 4e-18
gb|EMJ18239.1| hypothetical protein PRUPE_ppa001611mg [Prunus pe... 95 9e-18
ref|XP_002439452.1| hypothetical protein SORBIDRAFT_09g006640 [S... 95 9e-18
ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containi... 95 1e-17
ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 94 1e-17
ref|XP_003568739.1| PREDICTED: pentatricopeptide repeat-containi... 93 4e-17
ref|NP_190486.2| pentatricopeptide repeat-containing protein [Ar... 93 4e-17
emb|CAB66396.1| putative protein [Arabidopsis thaliana] 93 4e-17
ref|XP_004960622.1| PREDICTED: pentatricopeptide repeat-containi... 91 1e-16
>ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 104 bits (259), Expect = 1e-20
Identities = 49/92 (53%), Positives = 63/92 (68%)
Frame = -3
Query: 292 EEMGSRRDVVSWTALVSYGAQNGMQGRAIAMFCQMLETGIIPNEFSFCSVIQACSKSEYL 113
E MG++RD+VSW+A+VS A N M+ +AI F MLE G PNE+ F +VI+ACS + Y
Sbjct: 85 EGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYA 144
Query: 112 WIGRAILGFVVKMGFFWWDASVGCALIDMFAE 17
W+G I GFVVK G+ D VGC LIDMF +
Sbjct: 145 WVGEIIYGFVVKTGYLEADVCVGCELIDMFVK 176
Score = 62.4 bits (150), Expect = 6e-08
Identities = 30/86 (34%), Positives = 55/86 (63%)
Frame = -3
Query: 274 RDVVSWTALVSYGAQNGMQGRAIAMFCQMLETGIIPNEFSFCSVIQACSKSEYLWIGRAI 95
R++V+WT +++ AQ G AI +F M +G +P+ F++ SV+ AC++ L +G+ +
Sbjct: 194 RNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQL 253
Query: 94 LGFVVKMGFFWWDASVGCALIDMFAE 17
V+++G D VGC+L+DM+A+
Sbjct: 254 HSRVIRLGLAL-DVCVGCSLVDMYAK 278
Score = 60.1 bits (144), Expect = 3e-07
Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 4/96 (4%)
Frame = -3
Query: 289 EMGSRRDVVSWTALVSYGAQNG-MQGRAIAMFCQMLETGIIPNEFSFCSVIQACSKSEYL 113
E +V+SWTA+++ Q+G AI +FC+M+ I PN FSF SV++AC
Sbjct: 293 EQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDP 352
Query: 112 WIGRAILGFVVKMGFFWWDASVGC---ALIDMFAEN 14
+ G + + VK+G ASV C +LI M+A +
Sbjct: 353 YTGEQVYSYAVKLGI----ASVNCVGNSLISMYARS 384
>emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 104 bits (259), Expect = 1e-20
Identities = 49/92 (53%), Positives = 63/92 (68%)
Frame = -3
Query: 292 EEMGSRRDVVSWTALVSYGAQNGMQGRAIAMFCQMLETGIIPNEFSFCSVIQACSKSEYL 113
E MG++RD+VSW+A+VS A N M+ +AI F MLE G PNE+ F +VI+ACS + Y
Sbjct: 103 EGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYA 162
Query: 112 WIGRAILGFVVKMGFFWWDASVGCALIDMFAE 17
W+G I GFVVK G+ D VGC LIDMF +
Sbjct: 163 WVGEIIYGFVVKTGYLEADVCVGCELIDMFVK 194
Score = 62.4 bits (150), Expect = 6e-08
Identities = 30/86 (34%), Positives = 55/86 (63%)
Frame = -3
Query: 274 RDVVSWTALVSYGAQNGMQGRAIAMFCQMLETGIIPNEFSFCSVIQACSKSEYLWIGRAI 95
R++V+WT +++ AQ G AI +F M +G +P+ F++ SV+ AC++ L +G+ +
Sbjct: 212 RNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQL 271
Query: 94 LGFVVKMGFFWWDASVGCALIDMFAE 17
V+++G D VGC+L+DM+A+
Sbjct: 272 HSRVIRLGLAL-DVCVGCSLVDMYAK 296
Score = 60.1 bits (144), Expect = 3e-07
Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 4/96 (4%)
Frame = -3
Query: 289 EMGSRRDVVSWTALVSYGAQNG-MQGRAIAMFCQMLETGIIPNEFSFCSVIQACSKSEYL 113
E +V+SWTA+++ Q+G AI +FC+M+ I PN FSF SV++AC
Sbjct: 311 EQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDP 370
Query: 112 WIGRAILGFVVKMGFFWWDASVGC---ALIDMFAEN 14
+ G + + VK+G ASV C +LI M+A +
Sbjct: 371 YTGEQVYSYAVKLGI----ASVNCVGNSLISMYARS 402
>gb|EOY23498.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
Length = 860
Score = 102 bits (254), Expect = 5e-20
Identities = 50/97 (51%), Positives = 68/97 (70%), Gaps = 1/97 (1%)
Frame = -3
Query: 292 EEMGSRRDVVSWTALVSYGAQNGMQGRAIAMFCQMLETGIIPNEFSFCSVIQACSKSEYL 113
+ M +RD+VSW+A++S A N M+ +AI F MLE G PNE+ F +V++ACSK+E+
Sbjct: 134 QRMEDKRDLVSWSAMISCFANNKMEFKAILTFLDMLENGFYPNEYCFTAVVRACSKAEFF 193
Query: 112 WIGRAILGFVVKMGFFWWDASVGCALIDMFAE-NDDL 5
IG ILGF+VK G+ D +VGCALIDMF + N DL
Sbjct: 194 SIGEIILGFLVKSGYLESDTNVGCALIDMFVKGNSDL 230
Score = 60.8 bits (146), Expect = 2e-07
Identities = 30/88 (34%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
Frame = -3
Query: 274 RDVVSWTALVSYGAQNGMQGRAIAMFCQMLETGIIPNEFSFCSVIQACSK--SEYLWIGR 101
++VV+WT +++ Q G AI +F M+ G +P+ F+ +I AC++ SE L +G+
Sbjct: 243 KNVVAWTLMITRCTQLGYPRDAIDLFLDMVLGGYVPDRFTLSGIISACTELESESLSLGK 302
Query: 100 AILGFVVKMGFFWWDASVGCALIDMFAE 17
+ +V++ GF D +GC+L+DM+A+
Sbjct: 303 QLHSWVIRSGFAL-DVCIGCSLVDMYAK 329
>ref|XP_003634143.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Vitis vinifera]
Length = 631
Score = 101 bits (252), Expect = 9e-20
Identities = 48/92 (52%), Positives = 63/92 (68%)
Frame = -3
Query: 292 EEMGSRRDVVSWTALVSYGAQNGMQGRAIAMFCQMLETGIIPNEFSFCSVIQACSKSEYL 113
E MG++RD+VSW+A+VS A N M+ +AI F MLE G PNE+ F +VI+ACS + +
Sbjct: 134 EGMGNKRDLVSWSAMVSCFANNSMELQAIWTFLDMLELGFYPNEYCFAAVIRACSNANHA 193
Query: 112 WIGRAILGFVVKMGFFWWDASVGCALIDMFAE 17
W+G I GFVVK G+ D VGC LIDMF +
Sbjct: 194 WVGEIIYGFVVKTGYLEADVCVGCELIDMFVK 225
Score = 62.4 bits (150), Expect = 6e-08
Identities = 30/86 (34%), Positives = 55/86 (63%)
Frame = -3
Query: 274 RDVVSWTALVSYGAQNGMQGRAIAMFCQMLETGIIPNEFSFCSVIQACSKSEYLWIGRAI 95
R++V+WT +++ AQ G AI +F M +G +P+ F++ SV+ AC++ L +G+ +
Sbjct: 243 RNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQL 302
Query: 94 LGFVVKMGFFWWDASVGCALIDMFAE 17
V+++G D VGC+L+DM+A+
Sbjct: 303 HSRVIRLGLAL-DVCVGCSLVDMYAK 327
Score = 59.7 bits (143), Expect = 4e-07
Identities = 34/90 (37%), Positives = 52/90 (57%), Gaps = 4/90 (4%)
Frame = -3
Query: 271 DVVSWTALVSYGAQNG-MQGRAIAMFCQMLETGIIPNEFSFCSVIQACSKSEYLWIGRAI 95
+V+SWTA+++ Q+G AI +FC+M+ I PN FSF SV++AC + G +
Sbjct: 348 NVMSWTAIITAYVQSGECDKEAIELFCKMISGHIWPNHFSFSSVLKACGNLSDPYTGEQV 407
Query: 94 LGFVVKMGFFWWDASVGC---ALIDMFAEN 14
+ VK+G ASV C +LI M+A +
Sbjct: 408 YSYAVKLGI----ASVNCVGNSLISMYARS 433
>ref|XP_006290593.1| hypothetical protein CARUB_v10016682mg [Capsella rubella]
gi|482559300|gb|EOA23491.1| hypothetical protein
CARUB_v10016682mg [Capsella rubella]
Length = 850
Score = 100 bits (249), Expect = 2e-19
Identities = 48/99 (48%), Positives = 70/99 (70%), Gaps = 2/99 (2%)
Frame = -3
Query: 292 EEMG--SRRDVVSWTALVSYGAQNGMQGRAIAMFCQMLETGIIPNEFSFCSVIQACSKSE 119
E MG +RDVVSW+A+++ NG + AI +F + LE G++PN++ + +VI+ACS SE
Sbjct: 121 ETMGRFGKRDVVSWSAMMACFGNNGRELDAIRLFVEFLELGLVPNDYCYTAVIRACSNSE 180
Query: 118 YLWIGRAILGFVVKMGFFWWDASVGCALIDMFAENDDLL 2
Y+ +GR ILGF++K G F D VGC+LIDMF + D+ L
Sbjct: 181 YVGVGRVILGFLMKTGHFESDVCVGCSLIDMFVKGDNNL 219
Score = 55.8 bits (133), Expect = 6e-06
Identities = 33/88 (37%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
Frame = -3
Query: 268 VVSWTALVSYGAQN-GMQGRAIAMFCQMLETGII-PNEFSFCSVIQACSKSEYLWIGRAI 95
V+SWTAL++ QN + AI +FC+M+ G + PN F+F S I+AC +G+ +
Sbjct: 336 VMSWTALITGYMQNCNLAAEAINLFCEMITQGHVEPNHFTFSSAIKACGNILDPRVGKQV 395
Query: 94 LGFVVKMGFFWWDASVGCALIDMFAEND 11
LG K G ++SV ++I MF ++D
Sbjct: 396 LGHAFKRGLA-SNSSVANSVISMFVKSD 422
>ref|XP_006347856.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Solanum tuberosum]
Length = 849
Score = 100 bits (248), Expect = 3e-19
Identities = 47/92 (51%), Positives = 64/92 (69%)
Frame = -3
Query: 292 EEMGSRRDVVSWTALVSYGAQNGMQGRAIAMFCQMLETGIIPNEFSFCSVIQACSKSEYL 113
E MG +RD+VSW+A++S A GM+ ++ F M+E G PN+F F +VIQAC +E
Sbjct: 126 ESMGEKRDLVSWSAMISCYAHCGMELESVFTFFDMVEFGEYPNQFCFSAVIQACCSAELG 185
Query: 112 WIGRAILGFVVKMGFFWWDASVGCALIDMFAE 17
W+G AI GFV+K G+F D VGCALID+FA+
Sbjct: 186 WVGLAIFGFVIKTGYFESDICVGCALIDLFAK 217
Score = 63.2 bits (152), Expect = 4e-08
Identities = 29/87 (33%), Positives = 54/87 (62%)
Frame = -3
Query: 274 RDVVSWTALVSYGAQNGMQGRAIAMFCQMLETGIIPNEFSFCSVIQACSKSEYLWIGRAI 95
R++V+WT +++ +Q G A+ +F +M+ G +P+ F+F V+ AC++ +GR +
Sbjct: 235 RNLVTWTLMITRFSQLGASKDAVRLFLEMVSEGFVPDRFTFSGVLSACAEPGLSLLGRQL 294
Query: 94 LGFVVKMGFFWWDASVGCALIDMFAEN 14
G V+K D VGC+L+DM+A++
Sbjct: 295 HGGVIKSRLS-ADVCVGCSLVDMYAKS 320
Score = 56.2 bits (134), Expect = 4e-06
Identities = 32/90 (35%), Positives = 53/90 (58%), Gaps = 4/90 (4%)
Frame = -3
Query: 271 DVVSWTALVSYGAQNGMQG-RAIAMFCQMLETGIIPNEFSFCSVIQACSKSEYLWIGRAI 95
+V+SWTA+++ Q+G AI ++C+M++ + PN F+F S+++AC IG I
Sbjct: 340 NVMSWTAIITGYVQSGHYDMEAIKLYCRMIDNPVKPNHFTFSSLLKACGNLSNPAIGEQI 399
Query: 94 LGFVVKMGFFWWDASVGC---ALIDMFAEN 14
VK+G ASV C +LI M+A++
Sbjct: 400 YNHAVKLGL----ASVNCVANSLISMYAKS 425
>ref|XP_004231236.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Solanum lycopersicum]
Length = 844
Score = 99.0 bits (245), Expect = 6e-19
Identities = 46/92 (50%), Positives = 63/92 (68%)
Frame = -3
Query: 292 EEMGSRRDVVSWTALVSYGAQNGMQGRAIAMFCQMLETGIIPNEFSFCSVIQACSKSEYL 113
E MG +RD+VSW+A++S A GM+ ++ F M+E G PN+F F +VIQAC +E
Sbjct: 121 ESMGEKRDLVSWSAMISCYAHCGMELESVFTFYDMVEFGEYPNQFCFSAVIQACCSAELG 180
Query: 112 WIGRAILGFVVKMGFFWWDASVGCALIDMFAE 17
W+G AI GF +K G+F D VGCALID+FA+
Sbjct: 181 WVGLAIFGFAIKTGYFESDVCVGCALIDLFAK 212
Score = 62.8 bits (151), Expect = 5e-08
Identities = 29/87 (33%), Positives = 54/87 (62%)
Frame = -3
Query: 274 RDVVSWTALVSYGAQNGMQGRAIAMFCQMLETGIIPNEFSFCSVIQACSKSEYLWIGRAI 95
R++V+WT +++ +Q G A+ +F +M+ G +P+ F+F V+ AC++ +GR +
Sbjct: 230 RNLVTWTLMITRFSQLGASKDAVRLFLEMVSEGFVPDRFTFSGVLSACAEPGLSALGRQL 289
Query: 94 LGFVVKMGFFWWDASVGCALIDMFAEN 14
G V+K D VGC+L+DM+A++
Sbjct: 290 HGGVIKSRLS-ADVCVGCSLVDMYAKS 315
>ref|XP_006404168.1| hypothetical protein EUTSA_v10010119mg [Eutrema salsugineum]
gi|557105287|gb|ESQ45621.1| hypothetical protein
EUTSA_v10010119mg [Eutrema salsugineum]
Length = 850
Score = 98.6 bits (244), Expect = 8e-19
Identities = 47/96 (48%), Positives = 67/96 (69%)
Frame = -3
Query: 289 EMGSRRDVVSWTALVSYGAQNGMQGRAIAMFCQMLETGIIPNEFSFCSVIQACSKSEYLW 110
E +RDVVSW+A++ A NG + AI +F + LE G +PN++ + +VI+ACS SEY+
Sbjct: 124 ERFGKRDVVSWSAMMVCFANNGKELNAIELFVRFLELGFVPNDYCYTAVIRACSNSEYVS 183
Query: 109 IGRAILGFVVKMGFFWWDASVGCALIDMFAENDDLL 2
IGR ILGF++K G F D VGC+LIDMF + ++ L
Sbjct: 184 IGRVILGFLMKTGHFESDVCVGCSLIDMFVKGENNL 219
Score = 55.1 bits (131), Expect = 1e-05
Identities = 28/88 (31%), Positives = 50/88 (56%)
Frame = -3
Query: 280 SRRDVVSWTALVSYGAQNGMQGRAIAMFCQMLETGIIPNEFSFCSVIQACSKSEYLWIGR 101
S +VV+WT +++ Q G AI F M+ +G ++F+ SV AC++ E L +G+
Sbjct: 230 SELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGK 289
Query: 100 AILGFVVKMGFFWWDASVGCALIDMFAE 17
+ + ++ G VGC+L+DM+A+
Sbjct: 290 QLHSWAIRSGLA---DDVGCSLVDMYAK 314
>gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 829
Score = 97.8 bits (242), Expect = 1e-18
Identities = 47/92 (51%), Positives = 65/92 (70%), Gaps = 1/92 (1%)
Frame = -3
Query: 274 RDVVSWTALVSYGAQNGMQGRAIAMFCQMLETGIIPNEFSFCSVIQACSKSEYLWI-GRA 98
RD+VSWTA+ S ++NG + A+ +F + LE G++PN F+ C+ QAC SE + G A
Sbjct: 115 RDLVSWTAMASCLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFASELFHLAGGA 174
Query: 97 ILGFVVKMGFFWWDASVGCALIDMFAENDDLL 2
+LG V K+GF+ D SVGCALIDMFA+N DL+
Sbjct: 175 VLGLVFKLGFWGTDVSVGCALIDMFAKNGDLV 206
Score = 60.1 bits (144), Expect = 3e-07
Identities = 28/87 (32%), Positives = 52/87 (59%)
Frame = -3
Query: 274 RDVVSWTALVSYGAQNGMQGRAIAMFCQMLETGIIPNEFSFCSVIQACSKSEYLWIGRAI 95
R VV WT L++ AQ+G A+ +F MLE G P++++ S++ AC++ +G+ +
Sbjct: 218 RTVVVWTLLITRYAQSGYSDEAVELFLDMLENGFQPDQYTLSSMLSACTELGSFRLGQQL 277
Query: 94 LGFVVKMGFFWWDASVGCALIDMFAEN 14
+++G D+ V C L+DM+A++
Sbjct: 278 HSLALRLG-LESDSCVSCGLVDMYAKS 303
>ref|XP_006422178.1| hypothetical protein CICLE_v10006927mg [Citrus clementina]
gi|568874825|ref|XP_006490514.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Citrus sinensis]
gi|557524051|gb|ESR35418.1| hypothetical protein
CICLE_v10006927mg [Citrus clementina]
Length = 861
Score = 97.4 bits (241), Expect = 2e-18
Identities = 46/92 (50%), Positives = 64/92 (69%)
Frame = -3
Query: 292 EEMGSRRDVVSWTALVSYGAQNGMQGRAIAMFCQMLETGIIPNEFSFCSVIQACSKSEYL 113
+ MG++RD+VSW++++S G Q AI MF +MLE G PNE+ F +VI+ACS +E +
Sbjct: 137 KSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENV 196
Query: 112 WIGRAILGFVVKMGFFWWDASVGCALIDMFAE 17
IG I GF++K G+F D VGCALIDMF +
Sbjct: 197 AIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK 228
Score = 59.3 bits (142), Expect = 5e-07
Identities = 27/88 (30%), Positives = 50/88 (56%)
Frame = -3
Query: 280 SRRDVVSWTALVSYGAQNGMQGRAIAMFCQMLETGIIPNEFSFCSVIQACSKSEYLWIGR 101
+ ++ V WT +++ Q G AI +F M+ +G +P+ F+ V+ ACS+ E G+
Sbjct: 244 TEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGK 303
Query: 100 AILGFVVKMGFFWWDASVGCALIDMFAE 17
+ + ++ G D VGC+L+DM+A+
Sbjct: 304 QLHSWAIRTGLAL-DVCVGCSLVDMYAK 330
>ref|XP_002321443.2| hypothetical protein POPTR_0015s02060g [Populus trichocarpa]
gi|550321785|gb|EEF05570.2| hypothetical protein
POPTR_0015s02060g [Populus trichocarpa]
Length = 931
Score = 97.1 bits (240), Expect = 2e-18
Identities = 49/97 (50%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
Frame = -3
Query: 292 EEMGSRRDVVSWTALVSYGAQNGMQGRAIAMFCQMLETGIIPNEFSFCSVIQACSKSEYL 113
E MG++RD+VSW+AL+S A N AI+ F MLE G PNE+ F V +ACS E +
Sbjct: 207 ESMGNKRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENI 266
Query: 112 WIGRAILGFVVKMGFFWWDASVGCALIDMFAE-NDDL 5
+G+ I GF++K G+F D VGCALIDMF + N DL
Sbjct: 267 SLGKIIFGFLLKTGYFESDVCVGCALIDMFVKGNGDL 303
Score = 60.8 bits (146), Expect = 2e-07
Identities = 30/86 (34%), Positives = 51/86 (59%)
Frame = -3
Query: 274 RDVVSWTALVSYGAQNGMQGRAIAMFCQMLETGIIPNEFSFCSVIQACSKSEYLWIGRAI 95
R+VV+WT +++ Q G A+ +F M+ +G +P+ F+ V+ AC++ L +GR
Sbjct: 316 RNVVTWTLMITRFQQLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQF 375
Query: 94 LGFVVKMGFFWWDASVGCALIDMFAE 17
V+K G D VGC+L+DM+A+
Sbjct: 376 HCLVMKSGLD-LDVCVGCSLVDMYAK 400
Score = 59.3 bits (142), Expect = 5e-07
Identities = 31/88 (35%), Positives = 52/88 (59%), Gaps = 4/88 (4%)
Frame = -3
Query: 271 DVVSWTALVS-YGAQNGMQGRAIAMFCQMLETGIIPNEFSFCSVIQACSKSEYLWIGRAI 95
+V+SWTA+++ Y G AI +F +M++ + PN F+F SV++AC+ +W+G +
Sbjct: 421 NVMSWTAIITGYVQSGGCDREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQV 480
Query: 94 LGFVVKMGFFWWDASVGC---ALIDMFA 20
VVKM AS+ C +LI M++
Sbjct: 481 YALVVKMRL----ASINCVGNSLISMYS 504
>ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata] gi|297323492|gb|EFH53913.1| hypothetical protein
ARALYDRAFT_323502 [Arabidopsis lyrata subsp. lyrata]
Length = 1112
Score = 96.3 bits (238), Expect = 4e-18
Identities = 44/97 (45%), Positives = 69/97 (71%), Gaps = 2/97 (2%)
Frame = -3
Query: 292 EEMG--SRRDVVSWTALVSYGAQNGMQGRAIAMFCQMLETGIIPNEFSFCSVIQACSKSE 119
E MG +RDVVSW+A+++ NG + AI +F + LE G++PN++ + +VI+ACS S+
Sbjct: 121 ETMGRFGKRDVVSWSAMMACFGNNGREFDAIKLFVEFLEMGLVPNDYCYTAVIRACSNSD 180
Query: 118 YLWIGRAILGFVVKMGFFWWDASVGCALIDMFAENDD 8
++ +GR ILGF++K G F D VGC+LIDMF + ++
Sbjct: 181 FVGVGRVILGFLMKTGHFESDVCVGCSLIDMFVKGEN 217
>gb|EMJ18239.1| hypothetical protein PRUPE_ppa001611mg [Prunus persica]
Length = 793
Score = 95.1 bits (235), Expect = 9e-18
Identities = 47/92 (51%), Positives = 62/92 (67%)
Frame = -3
Query: 292 EEMGSRRDVVSWTALVSYGAQNGMQGRAIAMFCQMLETGIIPNEFSFCSVIQACSKSEYL 113
E MG++R++VSW+A+VS A N M AI F MLE G PNE+ F SVI+ACS ++ +
Sbjct: 69 ENMGNKRNLVSWSAMVSCFANNDMGLEAILTFLDMLEDGFYPNEYCFASVIRACSNAQNI 128
Query: 112 WIGRAILGFVVKMGFFWWDASVGCALIDMFAE 17
IG I G V+K G+ D VGC+LIDMFA+
Sbjct: 129 RIGNIIFGSVIKSGYLGSDVCVGCSLIDMFAK 160
Score = 65.9 bits (159), Expect = 6e-09
Identities = 31/85 (36%), Positives = 54/85 (63%)
Frame = -3
Query: 271 DVVSWTALVSYGAQNGMQGRAIAMFCQMLETGIIPNEFSFCSVIQACSKSEYLWIGRAIL 92
D V+WT +++ AQ G G AI ++ ML +G++P++F+ VI AC+K + L +G+ +
Sbjct: 179 DAVTWTLMITRLAQMGCPGEAIDLYVDMLWSGLMPDQFTLSGVISACTKLDSLSLGQQLH 238
Query: 91 GFVVKMGFFWWDASVGCALIDMFAE 17
+V++ G VGC L+DM+A+
Sbjct: 239 SWVIRSGLALGHC-VGCCLVDMYAK 262
>ref|XP_002439452.1| hypothetical protein SORBIDRAFT_09g006640 [Sorghum bicolor]
gi|241944737|gb|EES17882.1| hypothetical protein
SORBIDRAFT_09g006640 [Sorghum bicolor]
Length = 491
Score = 95.1 bits (235), Expect = 9e-18
Identities = 46/92 (50%), Positives = 65/92 (70%), Gaps = 1/92 (1%)
Frame = -3
Query: 274 RDVVSWTALVSYGAQNGMQGRAIAMFCQMLETGIIPNEFSFCSVIQACSKSE-YLWIGRA 98
RD+VSWTA+ S ++NG + A+ +F + LE G++PN F+ C+ QAC +E + G A
Sbjct: 116 RDLVSWTAMASCLSRNGAEAEALRLFGETLEEGLLPNAFTLCAAAQACFLTELFHSAGGA 175
Query: 97 ILGFVVKMGFFWWDASVGCALIDMFAENDDLL 2
+LG V K+GF+ D SVGCALIDMFA+N DL+
Sbjct: 176 VLGLVFKLGFWGTDVSVGCALIDMFAKNGDLV 207
>ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 94.7 bits (234), Expect = 1e-17
Identities = 44/90 (48%), Positives = 60/90 (66%)
Frame = -3
Query: 286 MGSRRDVVSWTALVSYGAQNGMQGRAIAMFCQMLETGIIPNEFSFCSVIQACSKSEYLWI 107
MGS RD++SW+A+VS A N M RA+ F M+E G PNE+ F + +ACS +E++ +
Sbjct: 127 MGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSV 186
Query: 106 GRAILGFVVKMGFFWWDASVGCALIDMFAE 17
G +I GFVVK G+ D VGC LIDMF +
Sbjct: 187 GDSIFGFVVKTGYLQSDVCVGCGLIDMFVK 216
Score = 59.3 bits (142), Expect = 5e-07
Identities = 30/86 (34%), Positives = 50/86 (58%)
Frame = -3
Query: 274 RDVVSWTALVSYGAQNGMQGRAIAMFCQMLETGIIPNEFSFCSVIQACSKSEYLWIGRAI 95
R+ V+WT +++ Q G G AI +F +M+ +G P+ F+ VI AC+ E L +G+ +
Sbjct: 234 RNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLGQQL 293
Query: 94 LGFVVKMGFFWWDASVGCALIDMFAE 17
++ G D VGC LI+M+A+
Sbjct: 294 HSQAIRHGLTL-DRCVGCCLINMYAK 318
Score = 56.6 bits (135), Expect = 3e-06
Identities = 33/90 (36%), Positives = 52/90 (57%), Gaps = 4/90 (4%)
Frame = -3
Query: 271 DVVSWTALVS-YGAQNGMQGRAIAMFCQMLETGIIPNEFSFCSVIQACSKSEYLWIGRAI 95
+V SWTA+++ Y + G A+ +F M+ T +IPN F+F S ++AC+ L IG +
Sbjct: 339 NVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQV 398
Query: 94 LGFVVKMGFFWWDASVGC---ALIDMFAEN 14
VK+GF +SV C +LI M+A +
Sbjct: 399 FTHAVKLGF----SSVNCVANSLISMYARS 424
>ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 94.4 bits (233), Expect = 1e-17
Identities = 43/90 (47%), Positives = 60/90 (66%)
Frame = -3
Query: 286 MGSRRDVVSWTALVSYGAQNGMQGRAIAMFCQMLETGIIPNEFSFCSVIQACSKSEYLWI 107
MGS RD++SW+A+VS A N M RA+ F M+E G PNE+ F + +ACS +E++ +
Sbjct: 127 MGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSV 186
Query: 106 GRAILGFVVKMGFFWWDASVGCALIDMFAE 17
G +I GFV+K G+ D VGC LIDMF +
Sbjct: 187 GDSIFGFVIKTGYLQSDVCVGCGLIDMFVK 216
Score = 58.5 bits (140), Expect = 9e-07
Identities = 30/86 (34%), Positives = 49/86 (56%)
Frame = -3
Query: 274 RDVVSWTALVSYGAQNGMQGRAIAMFCQMLETGIIPNEFSFCSVIQACSKSEYLWIGRAI 95
R+ V+WT +++ Q G G AI +F M+ +G P+ F+ VI AC+ E L +G+ +
Sbjct: 234 RNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQQL 293
Query: 94 LGFVVKMGFFWWDASVGCALIDMFAE 17
++ G D VGC LI+M+A+
Sbjct: 294 HSQAIRHGLTL-DRCVGCCLINMYAK 318
Score = 56.6 bits (135), Expect = 3e-06
Identities = 33/90 (36%), Positives = 52/90 (57%), Gaps = 4/90 (4%)
Frame = -3
Query: 271 DVVSWTALVS-YGAQNGMQGRAIAMFCQMLETGIIPNEFSFCSVIQACSKSEYLWIGRAI 95
+V SWTA+++ Y + G A+ +F M+ T +IPN F+F S ++AC+ L IG +
Sbjct: 339 NVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQV 398
Query: 94 LGFVVKMGFFWWDASVGC---ALIDMFAEN 14
VK+GF +SV C +LI M+A +
Sbjct: 399 FTHAVKLGF----SSVNCVANSLISMYARS 424
>ref|XP_003568739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Brachypodium distachyon]
Length = 818
Score = 92.8 bits (229), Expect = 4e-17
Identities = 46/98 (46%), Positives = 65/98 (66%), Gaps = 1/98 (1%)
Frame = -3
Query: 292 EEMGSRRDVVSWTALVSYGAQNGMQGRAIAMFCQMLETGIIPNEFSFCSVIQACSKSE-Y 116
++M RD+VSWTA+ S A+NG + ++ + +MLE G+ PN F+ C+ +AC E +
Sbjct: 100 DQMCGVRDLVSWTAMASCLARNGAERESLRLLGEMLELGLRPNAFTLCAAARACFPQELF 159
Query: 115 LWIGRAILGFVVKMGFFWWDASVGCALIDMFAENDDLL 2
G +LGFV+K GF+ D SVGCALIDMFA N DL+
Sbjct: 160 RLAGGVVLGFVLKTGFWGTDVSVGCALIDMFARNGDLV 197
>ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2261; Flags: Precursor
gi|58013018|gb|AAW62962.1| embryo-defective 2261
[Arabidopsis thaliana] gi|58013020|gb|AAW62963.1|
embryo-defective 2261 [Arabidopsis thaliana]
gi|332644986|gb|AEE78507.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 92.8 bits (229), Expect = 4e-17
Identities = 40/90 (44%), Positives = 65/90 (72%)
Frame = -3
Query: 277 RRDVVSWTALVSYGAQNGMQGRAIAMFCQMLETGIIPNEFSFCSVIQACSKSEYLWIGRA 98
+RDVVSW+A+++ NG + AI +F + LE G++PN++ + +VI+ACS S+++ +GR
Sbjct: 128 KRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRV 187
Query: 97 ILGFVVKMGFFWWDASVGCALIDMFAENDD 8
LGF++K G F D VGC+LIDMF + ++
Sbjct: 188 TLGFLMKTGHFESDVCVGCSLIDMFVKGEN 217
>emb|CAB66396.1| putative protein [Arabidopsis thaliana]
Length = 1113
Score = 92.8 bits (229), Expect = 4e-17
Identities = 40/90 (44%), Positives = 65/90 (72%)
Frame = -3
Query: 277 RRDVVSWTALVSYGAQNGMQGRAIAMFCQMLETGIIPNEFSFCSVIQACSKSEYLWIGRA 98
+RDVVSW+A+++ NG + AI +F + LE G++PN++ + +VI+ACS S+++ +GR
Sbjct: 128 KRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRV 187
Query: 97 ILGFVVKMGFFWWDASVGCALIDMFAENDD 8
LGF++K G F D VGC+LIDMF + ++
Sbjct: 188 TLGFLMKTGHFESDVCVGCSLIDMFVKGEN 217
>ref|XP_004960622.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Setaria italica]
Length = 827
Score = 91.3 bits (225), Expect = 1e-16
Identities = 48/92 (52%), Positives = 60/92 (65%), Gaps = 1/92 (1%)
Frame = -3
Query: 274 RDVVSWTALVSYGAQNGMQGRAIAMFCQMLETGIIPNEFSFCSVIQACSKSEYLW-IGRA 98
RD+VSWTA+ S A+NG + A+ + LE G PN F+ C+ QAC SE G A
Sbjct: 116 RDLVSWTAMASCLARNGAEAEALRLLGGTLEAGHRPNAFTLCAAAQACFVSELFHSAGGA 175
Query: 97 ILGFVVKMGFFWWDASVGCALIDMFAENDDLL 2
+LG V KMGF+ D SVGCALIDMFA+N DL+
Sbjct: 176 VLGMVFKMGFWGTDVSVGCALIDMFAKNGDLV 207
Score = 57.0 bits (136), Expect = 3e-06
Identities = 27/87 (31%), Positives = 51/87 (58%)
Frame = -3
Query: 274 RDVVSWTALVSYGAQNGMQGRAIAMFCQMLETGIIPNEFSFCSVIQACSKSEYLWIGRAI 95
R VV WT L++ AQ+ A+ +F MLE G P++++ S++ AC++ +G+ +
Sbjct: 219 RTVVVWTLLITRYAQDSYPEEAVELFLDMLENGFQPDQYTMSSMLSACTELGSFRLGQQL 278
Query: 94 LGFVVKMGFFWWDASVGCALIDMFAEN 14
+++G D+ V C L+DM+A++
Sbjct: 279 HSLALRLG-LESDSCVSCGLVDMYAKS 304