BLASTX nr result
ID: Zingiber24_contig00049589
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00049589
(459 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXB29469.1| hypothetical protein L484_022141 [Morus notabilis] 109 3e-22
ref|XP_002307076.2| pentatricopeptide repeat-containing family p... 107 2e-21
gb|EMJ08834.1| hypothetical protein PRUPE_ppa021864mg [Prunus pe... 102 5e-20
ref|XP_004148109.1| PREDICTED: pentatricopeptide repeat-containi... 101 1e-19
ref|XP_006390828.1| hypothetical protein EUTSA_v10018157mg [Eutr... 99 4e-19
ref|XP_002866898.1| pentatricopeptide repeat-containing protein ... 99 6e-19
ref|XP_006404950.1| hypothetical protein EUTSA_v10000054mg [Eutr... 99 8e-19
emb|CBI26593.3| unnamed protein product [Vitis vinifera] 98 1e-18
ref|XP_002276015.1| PREDICTED: pentatricopeptide repeat-containi... 98 1e-18
ref|XP_004156776.1| PREDICTED: pentatricopeptide repeat-containi... 97 2e-18
ref|NP_680777.2| pentatricopeptide repeat-containing protein [Ar... 97 2e-18
ref|XP_006653490.1| PREDICTED: pentatricopeptide repeat-containi... 96 6e-18
ref|XP_006283167.1| hypothetical protein CARUB_v10004198mg [Caps... 96 6e-18
gb|EOX92076.1| Pentatricopeptide repeat (PPR) superfamily protei... 93 4e-17
ref|XP_003581320.1| PREDICTED: pentatricopeptide repeat-containi... 90 4e-16
ref|XP_006353228.1| PREDICTED: pentatricopeptide repeat-containi... 89 6e-16
gb|EPS72647.1| hypothetical protein M569_02111, partial [Genlise... 87 2e-15
gb|EEC77421.1| hypothetical protein OsI_16207 [Oryza sativa Indi... 86 5e-15
gb|EEE61141.1| hypothetical protein OsJ_15084 [Oryza sativa Japo... 84 1e-14
ref|NP_001053014.1| Os04g0463800 [Oryza sativa Japonica Group] g... 84 1e-14
>gb|EXB29469.1| hypothetical protein L484_022141 [Morus notabilis]
Length = 778
Score = 109 bits (273), Expect = 3e-22
Identities = 58/111 (52%), Positives = 75/111 (67%)
Frame = -1
Query: 339 TPDFLSLRRHHALLIASGQSSNPFFAAKIIALYASFRRPDLAHRVFAAAAPSNPRDTFLW 160
T SL + HAL+I SG S+N F A+K+I+LYAS RP + VF + +P+DTFLW
Sbjct: 41 TSTLQSLLKSHALIITSGNSNNIFIASKLISLYASLNRPTNSTLVFYSI---HPKDTFLW 97
Query: 159 NSAIKSHFGAGDFRLAFSLFCGMRSSGAPPNEFTIPMVVSTAAELELLRLG 7
NS IK+HF GDF+ A LF MR+SG PN+FT+PMVV + A+L LL G
Sbjct: 98 NSVIKAHFSNGDFQEALYLFLRMRASGFVPNQFTLPMVVGSCADLMLLDCG 148
>ref|XP_002307076.2| pentatricopeptide repeat-containing family protein, partial
[Populus trichocarpa] gi|550338333|gb|EEE94072.2|
pentatricopeptide repeat-containing family protein,
partial [Populus trichocarpa]
Length = 744
Score = 107 bits (267), Expect = 2e-21
Identities = 54/111 (48%), Positives = 74/111 (66%)
Frame = -1
Query: 339 TPDFLSLRRHHALLIASGQSSNPFFAAKIIALYASFRRPDLAHRVFAAAAPSNPRDTFLW 160
T SL + HAL+I +G ++N F ++K+I+LYASFR+P + VF + +N +DTFLW
Sbjct: 43 TQTLQSLHKSHALIITTGNANNVFISSKLISLYASFRKPHSSTYVFDS---TNQKDTFLW 99
Query: 159 NSAIKSHFGAGDFRLAFSLFCGMRSSGAPPNEFTIPMVVSTAAELELLRLG 7
NS IKSHF G++ AF + MR PPN+FTIPM+V+T AEL L G
Sbjct: 100 NSIIKSHFSNGNYFKAFDFYIQMRYDNTPPNQFTIPMIVATCAELLWLEEG 150
>gb|EMJ08834.1| hypothetical protein PRUPE_ppa021864mg [Prunus persica]
Length = 748
Score = 102 bits (254), Expect = 5e-20
Identities = 50/106 (47%), Positives = 70/106 (66%)
Frame = -1
Query: 321 LRRHHALLIASGQSSNPFFAAKIIALYASFRRPDLAHRVFAAAAPSNPRDTFLWNSAIKS 142
L + HAL++ SG ++N F AAK+I+ YAS +P + +VF + P +DTFLWNS IK+
Sbjct: 48 LSQSHALIVTSGNANNIFIAAKLISFYASLSKPTFSTKVFGSVCP---KDTFLWNSIIKT 104
Query: 141 HFGAGDFRLAFSLFCGMRSSGAPPNEFTIPMVVSTAAELELLRLGS 4
HF GD+ A F MR+ G P +FT+PMVV++ AEL LL G+
Sbjct: 105 HFSNGDYSKALDFFFQMRALGFAPTQFTLPMVVASCAELMLLEHGN 150
>ref|XP_004148109.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Cucumis sativus]
Length = 784
Score = 101 bits (251), Expect = 1e-19
Identities = 50/108 (46%), Positives = 71/108 (65%)
Frame = -1
Query: 330 FLSLRRHHALLIASGQSSNPFFAAKIIALYASFRRPDLAHRVFAAAAPSNPRDTFLWNSA 151
F SL + H+L+I +G S+N FFA K++A YA R+P + +F + +D FLWNS
Sbjct: 53 FQSLLQFHSLIITTGNSNNVFFATKLMAFYAYHRKPAFSTHLFRLI---HSKDIFLWNSI 109
Query: 150 IKSHFGAGDFRLAFSLFCGMRSSGAPPNEFTIPMVVSTAAELELLRLG 7
I+SHF GD++ AF + MR+S + PN+FT+PMVVST AEL + G
Sbjct: 110 IQSHFSNGDYQRAFDFYLQMRASSSLPNQFTVPMVVSTCAELMMFNHG 157
>ref|XP_006390828.1| hypothetical protein EUTSA_v10018157mg [Eutrema salsugineum]
gi|557087262|gb|ESQ28114.1| hypothetical protein
EUTSA_v10018157mg [Eutrema salsugineum]
Length = 776
Score = 99.4 bits (246), Expect = 4e-19
Identities = 53/107 (49%), Positives = 68/107 (63%)
Frame = -1
Query: 324 SLRRHHALLIASGQSSNPFFAAKIIALYASFRRPDLAHRVFAAAAPSNPRDTFLWNSAIK 145
SLRRH+AL I G S N F A+K+I+ YAS+ +P+L+ VF + + RD FLWNS IK
Sbjct: 45 SLRRHNALTITGGNSDNIFVASKLISSYASYGKPNLSSTVFDSVSR---RDVFLWNSIIK 101
Query: 144 SHFGAGDFRLAFSLFCGMRSSGAPPNEFTIPMVVSTAAELELLRLGS 4
+HF GD+ A F M S P+ FT+PMVVS AEL L +GS
Sbjct: 102 AHFSNGDYPRALGFFFSMLLSCQSPDHFTVPMVVSACAELSWLGVGS 148
>ref|XP_002866898.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297312734|gb|EFH43157.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 742
Score = 99.0 bits (245), Expect = 6e-19
Identities = 52/107 (48%), Positives = 67/107 (62%)
Frame = -1
Query: 324 SLRRHHALLIASGQSSNPFFAAKIIALYASFRRPDLAHRVFAAAAPSNPRDTFLWNSAIK 145
SLR+H+AL+I G S N F A+K+I+ YAS+ +P+L+ RVF RD FLWNS IK
Sbjct: 47 SLRKHNALIITGGNSENIFVASKLISSYASYGKPNLSSRVFDLVTR---RDVFLWNSIIK 103
Query: 144 SHFGAGDFRLAFSLFCGMRSSGAPPNEFTIPMVVSTAAELELLRLGS 4
+HF GD+ + F M SG P+ FT PMVVS AEL +GS
Sbjct: 104 AHFSNGDYARSLGFFFSMLLSGQSPDHFTAPMVVSACAELLWFDVGS 150
>ref|XP_006404950.1| hypothetical protein EUTSA_v10000054mg [Eutrema salsugineum]
gi|557106078|gb|ESQ46403.1| hypothetical protein
EUTSA_v10000054mg [Eutrema salsugineum]
Length = 779
Score = 98.6 bits (244), Expect = 8e-19
Identities = 51/107 (47%), Positives = 67/107 (62%)
Frame = -1
Query: 324 SLRRHHALLIASGQSSNPFFAAKIIALYASFRRPDLAHRVFAAAAPSNPRDTFLWNSAIK 145
SLR+H+AL+I G S N F A+K+I+ YASF +P+++ +VF + RD FLWNS IK
Sbjct: 46 SLRKHNALIITGGNSDNVFVASKLISSYASFGKPNISSKVFDLVSQ---RDVFLWNSIIK 102
Query: 144 SHFGAGDFRLAFSLFCGMRSSGAPPNEFTIPMVVSTAAELELLRLGS 4
+HF D+ A F M SG P+ FT PMVVS AEL +GS
Sbjct: 103 AHFSNADYPRALDFFFSMLLSGQSPDHFTAPMVVSACAELSWYDVGS 149
>emb|CBI26593.3| unnamed protein product [Vitis vinifera]
Length = 459
Score = 98.2 bits (243), Expect = 1e-18
Identities = 50/106 (47%), Positives = 69/106 (65%)
Frame = -1
Query: 324 SLRRHHALLIASGQSSNPFFAAKIIALYASFRRPDLAHRVFAAAAPSNPRDTFLWNSAIK 145
+L + HA +I SG S+N F A+K+I+LYASF +P + +F RD FLWNS IK
Sbjct: 50 TLLQSHAFIITSGYSNNIFIASKLISLYASFHKPSCSTELFDEIPH---RDAFLWNSIIK 106
Query: 144 SHFGAGDFRLAFSLFCGMRSSGAPPNEFTIPMVVSTAAELELLRLG 7
+HF G++ A + MR+S A PN FTIPM+V++ AELEL+ G
Sbjct: 107 AHFSNGEYSRALDFYQWMRASEALPNHFTIPMIVASCAELELVNYG 152
>ref|XP_002276015.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Vitis vinifera]
Length = 744
Score = 98.2 bits (243), Expect = 1e-18
Identities = 50/106 (47%), Positives = 69/106 (65%)
Frame = -1
Query: 324 SLRRHHALLIASGQSSNPFFAAKIIALYASFRRPDLAHRVFAAAAPSNPRDTFLWNSAIK 145
+L + HA +I SG S+N F A+K+I+LYASF +P + +F RD FLWNS IK
Sbjct: 50 TLLQSHAFIITSGYSNNIFIASKLISLYASFHKPSCSTELFDEIPH---RDAFLWNSIIK 106
Query: 144 SHFGAGDFRLAFSLFCGMRSSGAPPNEFTIPMVVSTAAELELLRLG 7
+HF G++ A + MR+S A PN FTIPM+V++ AELEL+ G
Sbjct: 107 AHFSNGEYSRALDFYQWMRASEALPNHFTIPMIVASCAELELVNYG 152
>ref|XP_004156776.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Cucumis sativus]
Length = 754
Score = 97.4 bits (241), Expect = 2e-18
Identities = 47/101 (46%), Positives = 67/101 (66%)
Frame = -1
Query: 309 HALLIASGQSSNPFFAAKIIALYASFRRPDLAHRVFAAAAPSNPRDTFLWNSAIKSHFGA 130
H+L+I +G S+N FFA K++A YA R+P + +F + +D FLWNS I+SHF
Sbjct: 30 HSLIITTGNSNNVFFATKLMAFYAYHRKPAFSTHLFRLI---HSKDIFLWNSIIQSHFSN 86
Query: 129 GDFRLAFSLFCGMRSSGAPPNEFTIPMVVSTAAELELLRLG 7
GD++ AF + MR+S + PN+FT+PMVVST AEL + G
Sbjct: 87 GDYQRAFDFYLQMRASSSLPNQFTVPMVVSTCAELMMFNHG 127
>ref|NP_680777.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635624|sp|Q3E9N1.2|PP359_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g39952, mitochondrial; Flags: Precursor
gi|332661744|gb|AEE87144.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 775
Score = 97.1 bits (240), Expect = 2e-18
Identities = 51/107 (47%), Positives = 67/107 (62%)
Frame = -1
Query: 324 SLRRHHALLIASGQSSNPFFAAKIIALYASFRRPDLAHRVFAAAAPSNPRDTFLWNSAIK 145
SLR+H+AL+I G S N F A+K+I+ YAS+ +P+L+ RVF RD FLWNS IK
Sbjct: 42 SLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTR---RDIFLWNSIIK 98
Query: 144 SHFGAGDFRLAFSLFCGMRSSGAPPNEFTIPMVVSTAAELELLRLGS 4
+HF GD+ + F M SG P+ FT PMVVS AEL +G+
Sbjct: 99 AHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGT 145
>ref|XP_006653490.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Oryza brachyantha]
Length = 774
Score = 95.5 bits (236), Expect = 6e-18
Identities = 55/112 (49%), Positives = 69/112 (61%)
Frame = -1
Query: 339 TPDFLSLRRHHALLIASGQSSNPFFAAKIIALYASFRRPDLAHRVFAAAAPSNPRDTFLW 160
+P SL HAL + SG SS P FAAK+++ Y+S RP LA FAA S DTFLW
Sbjct: 25 SPPLPSLPGLHALAVTSGLSSRPDFAAKLVSAYSSAGRPGLAALAFAA---SPCPDTFLW 81
Query: 159 NSAIKSHFGAGDFRLAFSLFCGMRSSGAPPNEFTIPMVVSTAAELELLRLGS 4
NS ++SH A DF S MR+SGA P+ FT P+V S AAEL L++G+
Sbjct: 82 NSLLRSHHRASDFASVLSAHRRMRASGARPSRFTAPLVASAAAELGALQVGA 133
>ref|XP_006283167.1| hypothetical protein CARUB_v10004198mg [Capsella rubella]
gi|482551872|gb|EOA16065.1| hypothetical protein
CARUB_v10004198mg [Capsella rubella]
Length = 771
Score = 95.5 bits (236), Expect = 6e-18
Identities = 52/107 (48%), Positives = 67/107 (62%)
Frame = -1
Query: 324 SLRRHHALLIASGQSSNPFFAAKIIALYASFRRPDLAHRVFAAAAPSNPRDTFLWNSAIK 145
SLR+ AL+I G S N F A+K+I+ YAS +P+L+ RVF + S RD FLWNS IK
Sbjct: 36 SLRKLTALIITGGNSDNIFVASKLISSYASHGKPNLSSRVFDLVS-SRRRDVFLWNSIIK 94
Query: 144 SHFGAGDFRLAFSLFCGMRSSGAPPNEFTIPMVVSTAAELELLRLGS 4
+HF GD+ +F M SG P+ FT PMVVS +AEL +GS
Sbjct: 95 AHFSNGDYERTLGIFFSMLFSGHSPDHFTAPMVVSASAELFWFDVGS 141
>gb|EOX92076.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
[Theobroma cacao]
Length = 784
Score = 92.8 bits (229), Expect = 4e-17
Identities = 50/102 (49%), Positives = 68/102 (66%), Gaps = 2/102 (1%)
Frame = -1
Query: 324 SLRRHHALLIASGQSSNPFF-AAKIIALYASFRRPDLAHRVF-AAAAPSNPRDTFLWNSA 151
SL + HAL+I +G S+N F A+K+I+LYA F +P + +VF + + P+ +DTFLWNS
Sbjct: 48 SLLQSHALIITTGNSTNNIFIASKLISLYAFFNKPHFSTKVFDSLSIPA--KDTFLWNSI 105
Query: 150 IKSHFGAGDFRLAFSLFCGMRSSGAPPNEFTIPMVVSTAAEL 25
IKSHF G++ +F MR PPN+FTIPMV S AEL
Sbjct: 106 IKSHFSNGNYAESFEYHLKMRLHNTPPNDFTIPMVASACAEL 147
>ref|XP_003581320.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Brachypodium distachyon]
Length = 773
Score = 89.7 bits (221), Expect = 4e-16
Identities = 52/111 (46%), Positives = 66/111 (59%)
Frame = -1
Query: 336 PDFLSLRRHHALLIASGQSSNPFFAAKIIALYASFRRPDLAHRVFAAAAPSNPRDTFLWN 157
P ++L R HAL SG SS P FAAK+++ Y+S P A F+A S DTFLWN
Sbjct: 26 PPLIALLRLHALASTSGLSSRPDFAAKLVSAYSSSGLPGFATLAFSA---SPCPDTFLWN 82
Query: 156 SAIKSHFGAGDFRLAFSLFCGMRSSGAPPNEFTIPMVVSTAAELELLRLGS 4
S ++SH A DF A S MR+SGA P+ FT P+ S AAEL L +G+
Sbjct: 83 SLLRSHHCASDFDSALSAHRRMRASGARPSRFTAPLAASAAAELAALPVGT 133
>ref|XP_006353228.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Solanum tuberosum]
Length = 761
Score = 89.0 bits (219), Expect = 6e-16
Identities = 48/106 (45%), Positives = 66/106 (62%)
Frame = -1
Query: 324 SLRRHHALLIASGQSSNPFFAAKIIALYASFRRPDLAHRVFAAAAPSNPRDTFLWNSAIK 145
SL + HA +I +G + N + AAK+I+LYAS + +VF N +D FLWNS IK
Sbjct: 28 SLLQSHAFIITTGHTHNVYIAAKLISLYASNNNLISSRKVFDFI---NFKDPFLWNSIIK 84
Query: 144 SHFGAGDFRLAFSLFCGMRSSGAPPNEFTIPMVVSTAAELELLRLG 7
++F G + + L+ MR S A PN+FTIPMVVS AEL L+ +G
Sbjct: 85 AYFSNGKYTESLELYSSMRGSNALPNQFTIPMVVSACAELGLVEIG 130
>gb|EPS72647.1| hypothetical protein M569_02111, partial [Genlisea aurea]
Length = 409
Score = 87.0 bits (214), Expect = 2e-15
Identities = 46/103 (44%), Positives = 61/103 (59%)
Frame = -1
Query: 309 HALLIASGQSSNPFFAAKIIALYASFRRPDLAHRVFAAAAPSNPRDTFLWNSAIKSHFGA 130
HA I G + N F A+K+I YAS P + ++F + + +D FLWNS IK+HF A
Sbjct: 9 HAYTIVKGHAQNRFIASKLILSYASLGHPVCSTKIFVSV---HFKDLFLWNSIIKAHFSA 65
Query: 129 GDFRLAFSLFCGMRSSGAPPNEFTIPMVVSTAAELELLRLGSC 1
G++ A F MR P+EFT+PMVVS +AEL L LG C
Sbjct: 66 GNYAEAIEFFSQMRFLAFSPDEFTLPMVVSASAELGSLFLGMC 108
>gb|EEC77421.1| hypothetical protein OsI_16207 [Oryza sativa Indica Group]
Length = 683
Score = 85.9 bits (211), Expect = 5e-15
Identities = 52/111 (46%), Positives = 64/111 (57%)
Frame = -1
Query: 336 PDFLSLRRHHALLIASGQSSNPFFAAKIIALYASFRRPDLAHRVFAAAAPSNPRDTFLWN 157
P SL HAL + SG S P FAAK+++ Y+S P LA FAA S D FLWN
Sbjct: 20 PPLPSLLTLHALAVTSGLSPRPDFAAKLVSAYSSAGLPALAALAFAA---SPCPDAFLWN 76
Query: 156 SAIKSHFGAGDFRLAFSLFCGMRSSGAPPNEFTIPMVVSTAAELELLRLGS 4
S ++S A DF A S MR+SGA P+ FT P+V S AAEL L +G+
Sbjct: 77 SLLRSRHRASDFASALSAHRRMRASGARPSRFTAPLVASAAAELGALPVGA 127
>gb|EEE61141.1| hypothetical protein OsJ_15084 [Oryza sativa Japonica Group]
Length = 897
Score = 84.3 bits (207), Expect = 1e-14
Identities = 51/111 (45%), Positives = 63/111 (56%)
Frame = -1
Query: 336 PDFLSLRRHHALLIASGQSSNPFFAAKIIALYASFRRPDLAHRVFAAAAPSNPRDTFLWN 157
P SL HAL + SG S P FAAK+++ Y+S P LA FAA S D FLWN
Sbjct: 20 PPLPSLLTLHALAVTSGLSPRPDFAAKLVSAYSSAGLPALAALAFAA---SPCPDAFLWN 76
Query: 156 SAIKSHFGAGDFRLAFSLFCGMRSSGAPPNEFTIPMVVSTAAELELLRLGS 4
S ++S A DF S MR+SGA P+ FT P+V S AAEL L +G+
Sbjct: 77 SLLRSRHRASDFASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGA 127
>ref|NP_001053014.1| Os04g0463800 [Oryza sativa Japonica Group]
gi|38347057|emb|CAE04357.2| OSJNBa0060P14.4 [Oryza
sativa Japonica Group] gi|113564585|dbj|BAF14928.1|
Os04g0463800 [Oryza sativa Japonica Group]
Length = 767
Score = 84.3 bits (207), Expect = 1e-14
Identities = 51/111 (45%), Positives = 63/111 (56%)
Frame = -1
Query: 336 PDFLSLRRHHALLIASGQSSNPFFAAKIIALYASFRRPDLAHRVFAAAAPSNPRDTFLWN 157
P SL HAL + SG S P FAAK+++ Y+S P LA FAA S D FLWN
Sbjct: 20 PPLPSLLTLHALAVTSGLSPRPDFAAKLVSAYSSAGLPALAALAFAA---SPCPDAFLWN 76
Query: 156 SAIKSHFGAGDFRLAFSLFCGMRSSGAPPNEFTIPMVVSTAAELELLRLGS 4
S ++S A DF S MR+SGA P+ FT P+V S AAEL L +G+
Sbjct: 77 SLLRSRHRASDFASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGA 127