BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00049359
         (425 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ14151.1| hypothetical protein PRUPE_ppa022121mg [Prunus pe...   110   2e-22
ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containi...   102   7e-20
emb|CBI23204.3| unnamed protein product [Vitis vinifera]              102   7e-20
gb|EXB77045.1| hypothetical protein L484_014171 [Morus notabilis]     100   3e-19
gb|EOY28770.1| Tetratricopeptide repeat-like superfamily protein...    98   1e-18
ref|XP_004168223.1| PREDICTED: pentatricopeptide repeat-containi...    97   2e-18
ref|XP_004139152.1| PREDICTED: pentatricopeptide repeat-containi...    97   3e-18
ref|XP_003547263.1| PREDICTED: pentatricopeptide repeat-containi...    95   8e-18
ref|XP_004295288.1| PREDICTED: pentatricopeptide repeat-containi...    94   1e-17
gb|ESW19690.1| hypothetical protein PHAVU_006G147000g [Phaseolus...    94   2e-17
ref|XP_003534717.1| PREDICTED: pentatricopeptide repeat-containi...    91   2e-16
ref|XP_004486315.1| PREDICTED: pentatricopeptide repeat-containi...    90   3e-16
ref|XP_004158080.1| PREDICTED: pentatricopeptide repeat-containi...    89   8e-16
ref|XP_004135750.1| PREDICTED: pentatricopeptide repeat-containi...    88   1e-15
ref|XP_002874797.1| pentatricopeptide repeat-containing protein ...    88   1e-15
ref|XP_002867315.1| pentatricopeptide repeat-containing protein ...    87   2e-15
ref|XP_006348147.1| PREDICTED: pentatricopeptide repeat-containi...    87   3e-15
gb|EOY31979.1| Pentatricopeptide repeat superfamily protein isof...    87   3e-15
gb|EOY31977.1| Pentatricopeptide repeat superfamily protein isof...    87   3e-15
gb|EOY31976.1| Pentatricopeptide repeat superfamily protein isof...    87   3e-15

>gb|EMJ14151.1| hypothetical protein PRUPE_ppa022121mg [Prunus persica]
          Length = 701

 Score =  110 bits (275), Expect = 2e-22
 Identities = 59/124 (47%), Positives = 74/124 (59%), Gaps = 2/124 (1%)
 Frame = +1

Query: 10  DMRRSDVRPNSVTFLSMLP--LDLVPLQCLHASAFRHGLESXXXXXXXXXXXYGRCGCVA 183
           DMRR  ++P+ VT LS+L    +L  LQCLH  A  +G ES           YG+CG V 
Sbjct: 101 DMRREGIQPSPVTLLSLLSGVTELTYLQCLHGCAVLYGFESDITLLNSILNVYGKCGRVE 160

Query: 184 LARKLFDSMPERDAISWNSVLSGYSKTGRVREAFYLFGAMRNEGIHPDRWTYGSLVSSIN 363
            AR LF+ M  RD +SWNS++SGYS+TG +R+ F L   MR EGI PD+ TY S VS   
Sbjct: 161 DARDLFEYMDGRDIVSWNSLISGYSQTGNIRDVFQLLRKMRVEGILPDKQTYASAVSVAA 220

Query: 364 TSED 375
           T  D
Sbjct: 221 TQSD 224



 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 40/121 (33%), Positives = 60/121 (49%), Gaps = 5/121 (4%)
 Frame = +1

Query: 13  MRRSDVRPNSVTFLSMLP----LDLVPLQC-LHASAFRHGLESXXXXXXXXXXXYGRCGC 177
           M +++  P++ TF ++L     L+L P     H     +G              Y + G 
Sbjct: 1   MLKTNTPPDTYTFPNLLKACTSLNLFPFGLSFHQCLVVNGFSLDAYIASSLINFYAKFGH 60

Query: 178 VALARKLFDSMPERDAISWNSVLSGYSKTGRVREAFYLFGAMRNEGIHPDRWTYGSLVSS 357
              ARK+FD+MPER+ + W S++  YS+ G V  AF +F  MR EGI P   T  SL+S 
Sbjct: 61  AQNARKVFDAMPERNVVPWTSIIGCYSRAGNVGIAFDMFCDMRREGIQPSPVTLLSLLSG 120

Query: 358 I 360
           +
Sbjct: 121 V 121



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 36/122 (29%), Positives = 57/122 (46%), Gaps = 7/122 (5%)
 Frame = +1

Query: 13  MRRSDVRPNSVTFLSMLP-------LDLVPLQCLHASAFRHGLESXXXXXXXXXXXYGRC 171
           M +S   P+S T  S L        LDL     +H    R G+             Y +C
Sbjct: 301 MLQSRTEPSSATIASALAACAQLGSLDLGT--SIHGYVLRQGMRLDIPAQNSLVSMYAKC 358

Query: 172 GCVALARKLFDSMPERDAISWNSVLSGYSKTGRVREAFYLFGAMRNEGIHPDRWTYGSLV 351
             +  +R +F+ + +RD +SWN++++GY++ G + EA  LF  MR     PD  T  SL+
Sbjct: 359 ARLGQSRAVFERIGKRDLVSWNAIVAGYAQNGHIHEALVLFSEMRATLQKPDSLTVVSLL 418

Query: 352 SS 357
            +
Sbjct: 419 QA 420


>ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Vitis vinifera]
          Length = 732

 Score =  102 bits (253), Expect = 7e-20
 Identities = 53/117 (45%), Positives = 73/117 (62%), Gaps = 2/117 (1%)
 Frame = +1

Query: 13  MRRSDVRPNSVTFLSMLP--LDLVPLQCLHASAFRHGLESXXXXXXXXXXXYGRCGCVAL 186
           MRR  ++P+SVT L +L   L+LV LQCLHA   ++G  S           Y +CG V  
Sbjct: 140 MRRQGIQPSSVTMLGLLSGVLELVHLQCLHACVIQYGFGSDVALANSMLNVYCKCGRVED 199

Query: 187 ARKLFDSMPERDAISWNSVLSGYSKTGRVREAFYLFGAMRNEGIHPDRWTYGSLVSS 357
           A+ LF+ M  RD ISWNS++SGY++ G +RE   L   M+ +GI PD+ T+GSLVS+
Sbjct: 200 AQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLVSA 256



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 35/122 (28%), Positives = 62/122 (50%), Gaps = 6/122 (4%)
 Frame = +1

Query: 10  DMRRSDVRPNSVTFLSMLPLDLVPLQCLHASAFRHG------LESXXXXXXXXXXXYGRC 171
           +MR++  RP+S+T +S+L      +  LH   + H       L             Y +C
Sbjct: 439 EMRKARQRPDSITVVSLLQA-CASIGALHQGKWIHNFVTKSCLGPCILIDTALVDMYSKC 497

Query: 172 GCVALARKLFDSMPERDAISWNSVLSGYSKTGRVREAFYLFGAMRNEGIHPDRWTYGSLV 351
           G +  A+K FD MP++D +SW+S+++GY   G+   A  ++    + GI P+   Y S++
Sbjct: 498 GDLGSAQKCFDRMPQQDLVSWSSIIAGYGSHGKGETALRMYSDFLHTGIQPNHVIYLSIL 557

Query: 352 SS 357
           S+
Sbjct: 558 SA 559



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 5/122 (4%)
 Frame = +1

Query: 7   RDMRRSDVRPNSVTFLSMLP----LDLVPL-QCLHASAFRHGLESXXXXXXXXXXXYGRC 171
           R M +S V P++ T  S+L     L   PL   +H    R  ++            Y +C
Sbjct: 337 RRMLKSRVMPSTATIASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKC 396

Query: 172 GCVALARKLFDSMPERDAISWNSVLSGYSKTGRVREAFYLFGAMRNEGIHPDRWTYGSLV 351
           G +  +  +FD M  RD +SWN+++SG+++ G + +A  LF  MR     PD  T  SL+
Sbjct: 397 GHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLL 456

Query: 352 SS 357
            +
Sbjct: 457 QA 458


>emb|CBI23204.3| unnamed protein product [Vitis vinifera]
          Length = 907

 Score =  102 bits (253), Expect = 7e-20
 Identities = 53/117 (45%), Positives = 73/117 (62%), Gaps = 2/117 (1%)
 Frame = +1

Query: 13  MRRSDVRPNSVTFLSMLP--LDLVPLQCLHASAFRHGLESXXXXXXXXXXXYGRCGCVAL 186
           MRR  ++P+SVT L +L   L+LV LQCLHA   ++G  S           Y +CG V  
Sbjct: 140 MRRQGIQPSSVTMLGLLSGVLELVHLQCLHACVIQYGFGSDVALANSMLNVYCKCGRVED 199

Query: 187 ARKLFDSMPERDAISWNSVLSGYSKTGRVREAFYLFGAMRNEGIHPDRWTYGSLVSS 357
           A+ LF+ M  RD ISWNS++SGY++ G +RE   L   M+ +GI PD+ T+GSLVS+
Sbjct: 200 AQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLVSA 256



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 35/122 (28%), Positives = 62/122 (50%), Gaps = 6/122 (4%)
 Frame = +1

Query: 10  DMRRSDVRPNSVTFLSMLPLDLVPLQCLHASAFRHG------LESXXXXXXXXXXXYGRC 171
           +MR++  RP+S+T +S+L      +  LH   + H       L             Y +C
Sbjct: 439 EMRKARQRPDSITVVSLLQA-CASIGALHQGKWIHNFVTKSCLGPCILIDTALVDMYSKC 497

Query: 172 GCVALARKLFDSMPERDAISWNSVLSGYSKTGRVREAFYLFGAMRNEGIHPDRWTYGSLV 351
           G +  A+K FD MP++D +SW+S+++GY   G+   A  ++    + GI P+   Y S++
Sbjct: 498 GDLGSAQKCFDRMPQQDLVSWSSIIAGYGSHGKGETALRMYSDFLHTGIQPNHVIYLSIL 557

Query: 352 SS 357
           S+
Sbjct: 558 SA 559



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 5/122 (4%)
 Frame = +1

Query: 7   RDMRRSDVRPNSVTFLSMLP----LDLVPL-QCLHASAFRHGLESXXXXXXXXXXXYGRC 171
           R M +S V P++ T  S+L     L   PL   +H    R  ++            Y +C
Sbjct: 337 RRMLKSRVMPSTATIASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKC 396

Query: 172 GCVALARKLFDSMPERDAISWNSVLSGYSKTGRVREAFYLFGAMRNEGIHPDRWTYGSLV 351
           G +  +  +FD M  RD +SWN+++SG+++ G + +A  LF  MR     PD  T  SL+
Sbjct: 397 GHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLL 456

Query: 352 SS 357
            +
Sbjct: 457 QA 458


>gb|EXB77045.1| hypothetical protein L484_014171 [Morus notabilis]
          Length = 746

 Score =  100 bits (248), Expect = 3e-19
 Identities = 50/124 (40%), Positives = 73/124 (58%), Gaps = 2/124 (1%)
 Frame = +1

Query: 10  DMRRSDVRPNSVTFLSMLP--LDLVPLQCLHASAFRHGLESXXXXXXXXXXXYGRCGCVA 183
           +MR    +P+ VT LS+LP   +L  ++CLH  A  +G E            Y +CG + 
Sbjct: 148 EMRHQGFQPSPVTLLSLLPGVSELAHVRCLHGCAVSYGFEGNVSLMNSILSVYSKCGGIE 207

Query: 184 LARKLFDSMPERDAISWNSVLSGYSKTGRVREAFYLFGAMRNEGIHPDRWTYGSLVSSIN 363
            AR LF+ M  +D +SWNS++SGY++ G   E F LF  MR+EGI PD+ T+GS+VS+  
Sbjct: 208 DARSLFEFMTGKDIVSWNSLMSGYAQCGNFTEVFQLFYRMRDEGIRPDKQTFGSVVSASA 267

Query: 364 TSED 375
           T  +
Sbjct: 268 TQSN 271



 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 44/122 (36%), Positives = 62/122 (50%), Gaps = 5/122 (4%)
 Frame = +1

Query: 13  MRRSDVRPNSVTFLSMLP----LDLVPLQC-LHASAFRHGLESXXXXXXXXXXXYGRCGC 177
           M +S+  P++ TF S+      L L PL   LH     +G  S           Y + GC
Sbjct: 48  MLQSNTPPDTHTFPSLFKACASLHLFPLGISLHQCVVVNGFSSDPYVASSLVSFYAKFGC 107

Query: 178 VALARKLFDSMPERDAISWNSVLSGYSKTGRVREAFYLFGAMRNEGIHPDRWTYGSLVSS 357
           V  ARK+FD MPER+ + W S++  YS TG V +A  LF  MR++G  P   T  SL+  
Sbjct: 108 VGNARKVFDDMPERNIVPWTSIIGCYSCTGDVDQAVLLFSEMRHQGFQPSPVTLLSLLPG 167

Query: 358 IN 363
           ++
Sbjct: 168 VS 169



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 5/115 (4%)
 Frame = +1

Query: 1   FLRDMRRSDVRPNSVTFLSMLPL-----DLVPLQCLHASAFRHGLESXXXXXXXXXXXYG 165
           FL +MR +  +P+S+T +S+L        L   + +H+   R  L             Y 
Sbjct: 445 FLSEMRETLQKPDSLTVVSLLQACASIGALHQGKWIHSFVIRSCLRPCILVDTALVDMYS 504

Query: 166 RCGCVALARKLFDSMPERDAISWNSVLSGYSKTGRVREAFYLFGAMRNEGIHPDR 330
           +CG + +A+K F+ M E D +SW +++SGY   G+   A  L+      GI PD+
Sbjct: 505 KCGDLEMAQKCFNEMLEHDRVSWGTMISGYGCHGKGETALRLYTEFLRAGIEPDQ 559


>gb|EOY28770.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
          Length = 1250

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 50/121 (41%), Positives = 74/121 (61%), Gaps = 2/121 (1%)
 Frame = +1

Query: 4   LRDMRRSDVRPNSVTFLSMLP--LDLVPLQCLHASAFRHGLESXXXXXXXXXXXYGRCGC 177
           L +MR + V P+ VTFLS+L   L++  +Q LH  A  +G ES           Y +CG 
Sbjct: 135 LNEMRYNGVEPSPVTFLSLLSGALEVAQVQALHGCAVLYGFESDIAVGNSLLNAYSKCGS 194

Query: 178 VALARKLFDSMPERDAISWNSVLSGYSKTGRVREAFYLFGAMRNEGIHPDRWTYGSLVSS 357
           +  AR LF+ M ++D ISWNS++SGY++ G V E   L  AM+ E + PD+ T+GSLV++
Sbjct: 195 IGEARGLFELMDQKDKISWNSLISGYAQLGNVEEILQLLYAMKIENMGPDQQTFGSLVTA 254

Query: 358 I 360
           +
Sbjct: 255 V 255


>ref|XP_004168223.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Cucumis sativus]
          Length = 743

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 53/119 (44%), Positives = 71/119 (59%), Gaps = 2/119 (1%)
 Frame = +1

Query: 7   RDMRRSDVRPNSVTFLSMLP-LDLVPLQ-CLHASAFRHGLESXXXXXXXXXXXYGRCGCV 180
           + MR S ++P SVT LS+LP +  +PL  CLH     HG ES           YG+CG +
Sbjct: 139 KQMRESGIQPTSVTLLSLLPGISKLPLLLCLHCLIILHGFESDLALSNSMVNMYGKCGRI 198

Query: 181 ALARKLFDSMPERDAISWNSVLSGYSKTGRVREAFYLFGAMRNEGIHPDRWTYGSLVSS 357
           A AR+LF+S+  RD +SWNS+LS YSK G   E   L  AM+ E I PD+ T+ S +S+
Sbjct: 199 ADARRLFESIGCRDIVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPDKQTFCSALSA 257



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 31/91 (34%), Positives = 47/91 (51%)
 Frame = +1

Query: 91  LHASAFRHGLESXXXXXXXXXXXYGRCGCVALARKLFDSMPERDAISWNSVLSGYSKTGR 270
           LH S   +GL             Y + GC+ L RK+FD+M +R+ + W +++  YS+ G 
Sbjct: 71  LHQSVVVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGD 130

Query: 271 VREAFYLFGAMRNEGIHPDRWTYGSLVSSIN 363
           +  AF +F  MR  GI P   T  SL+  I+
Sbjct: 131 IDIAFSMFKQMRESGIQPTSVTLLSLLPGIS 161



 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 32/125 (25%), Positives = 59/125 (47%), Gaps = 6/125 (4%)
 Frame = +1

Query: 13  MRRSDVRPNSVTFLSMLPLDLVPLQC------LHASAFRHGLESXXXXXXXXXXXYGRCG 174
           M  S+V+P++ T  S L      L C      +H    R G+             Y +C 
Sbjct: 340 MIESNVKPSTATLASGLAA-CAQLGCCDIGASIHGYVLRQGIMLDIPAQNSLVTMYAKCN 398

Query: 175 CVALARKLFDSMPERDAISWNSVLSGYSKTGRVREAFYLFGAMRNEGIHPDRWTYGSLVS 354
            +  +  +F+ M E+D +SWN++++G++K G + +  + F  MR   + PD  T  SL+ 
Sbjct: 399 KLQQSCSIFNKMVEKDLVSWNAIVAGHAKNGYLSKGIFFFNEMRKSFLRPDSITVTSLLQ 458

Query: 355 SINTS 369
           +  ++
Sbjct: 459 ACGSA 463


>ref|XP_004139152.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Cucumis sativus]
          Length = 743

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 53/119 (44%), Positives = 70/119 (58%), Gaps = 2/119 (1%)
 Frame = +1

Query: 7   RDMRRSDVRPNSVTFLSMLP-LDLVPLQ-CLHASAFRHGLESXXXXXXXXXXXYGRCGCV 180
           + MR S ++P SVT LS+LP +  +PL  CLH     HG ES           YG+CG +
Sbjct: 139 KQMRESGIQPTSVTLLSLLPGISKLPLLLCLHCLIILHGFESDLALSNSMVNMYGKCGRI 198

Query: 181 ALARKLFDSMPERDAISWNSVLSGYSKTGRVREAFYLFGAMRNEGIHPDRWTYGSLVSS 357
           A AR+LF S+  RD +SWNS+LS YSK G   E   L  AM+ E I PD+ T+ S +S+
Sbjct: 199 ADARRLFQSIDCRDIVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPDKQTFCSALSA 257



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 31/91 (34%), Positives = 47/91 (51%)
 Frame = +1

Query: 91  LHASAFRHGLESXXXXXXXXXXXYGRCGCVALARKLFDSMPERDAISWNSVLSGYSKTGR 270
           LH S   +GL             Y + GC+ L RK+FD+M +R+ + W +++  YS+ G 
Sbjct: 71  LHQSVVVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGD 130

Query: 271 VREAFYLFGAMRNEGIHPDRWTYGSLVSSIN 363
           +  AF +F  MR  GI P   T  SL+  I+
Sbjct: 131 IDIAFSMFKQMRESGIQPTSVTLLSLLPGIS 161



 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 32/125 (25%), Positives = 59/125 (47%), Gaps = 6/125 (4%)
 Frame = +1

Query: 13  MRRSDVRPNSVTFLSMLPLDLVPLQC------LHASAFRHGLESXXXXXXXXXXXYGRCG 174
           M  S+V+P++ T  S L      L C      +H    R G+             Y +C 
Sbjct: 340 MIESNVKPSTATLASGLAA-CAQLGCCDIGASIHGYVLRQGIMLDIPAQNSLVTMYAKCN 398

Query: 175 CVALARKLFDSMPERDAISWNSVLSGYSKTGRVREAFYLFGAMRNEGIHPDRWTYGSLVS 354
            +  +  +F+ M E+D +SWN++++G++K G + +  + F  MR   + PD  T  SL+ 
Sbjct: 399 KLQQSCSIFNKMVEKDLVSWNAIVAGHAKNGYLSKGIFFFNEMRKSFLRPDSITVTSLLQ 458

Query: 355 SINTS 369
           +  ++
Sbjct: 459 ACGSA 463


>ref|XP_003547263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Glycine max]
          Length = 764

 Score = 95.1 bits (235), Expect = 8e-18
 Identities = 48/117 (41%), Positives = 70/117 (59%), Gaps = 2/117 (1%)
 Frame = +1

Query: 10  DMRRSDVRPNSVTFLSML--PLDLVPLQCLHASAFRHGLESXXXXXXXXXXXYGRCGCVA 183
           +MRR  ++P+SVT LS+L    +L  +QCLH SA  +G  S           YG+C  + 
Sbjct: 160 EMRRQGIQPSSVTMLSLLFGVSELAHVQCLHGSAILYGFMSDINLSNSMLSMYGKCRNIE 219

Query: 184 LARKLFDSMPERDAISWNSVLSGYSKTGRVREAFYLFGAMRNEGIHPDRWTYGSLVS 354
            +RKLFD M +RD +SWNS++S Y++ G + E   L   MR +G  PD  T+GS++S
Sbjct: 220 YSRKLFDYMDQRDLVSWNSLVSAYAQIGYICEVLLLLKTMRIQGFEPDPQTFGSVLS 276



 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 45/122 (36%), Positives = 63/122 (51%), Gaps = 5/122 (4%)
 Frame = +1

Query: 13  MRRSDVRPNSVTFLSMLP----LDLVPLQC-LHASAFRHGLESXXXXXXXXXXXYGRCGC 177
           M ++ V  ++ TF S+L     L+L  L   LH      GL             Y + G 
Sbjct: 60  MLKTHVPSDAYTFPSLLKACSSLNLFSLGLSLHQRILVSGLSLDAYIASSLINFYAKFGF 119

Query: 178 VALARKLFDSMPERDAISWNSVLSGYSKTGRVREAFYLFGAMRNEGIHPDRWTYGSLVSS 357
             +ARK+FD MPER+ + W S++  YS+TGRV EAF LF  MR +GI P   T  SL+  
Sbjct: 120 ADVARKVFDFMPERNVVPWTSIIGCYSRTGRVPEAFSLFDEMRRQGIQPSSVTMLSLLFG 179

Query: 358 IN 363
           ++
Sbjct: 180 VS 181



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 28/87 (32%), Positives = 48/87 (55%)
 Frame = +1

Query: 91  LHASAFRHGLESXXXXXXXXXXXYGRCGCVALARKLFDSMPERDAISWNSVLSGYSKTGR 270
           +H   FRH L             + +CG +  +  +FD M +R+ +SWN++++GY++ G 
Sbjct: 391 VHGYMFRHELPMDIATQNSLVTMHAKCGHLDQSSIVFDKMNKRNLVSWNAMITGYAQNGY 450

Query: 271 VREAFYLFGAMRNEGIHPDRWTYGSLV 351
           V +A +LF  MR++   PD  T  SL+
Sbjct: 451 VCKALFLFNEMRSDHQTPDSITIVSLL 477



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 31/121 (25%), Positives = 57/121 (47%), Gaps = 5/121 (4%)
 Frame = +1

Query: 10  DMRRSDVRPNSVTFLSMLPLDLVPLQC-----LHASAFRHGLESXXXXXXXXXXXYGRCG 174
           +MR     P+S+T +S+L       Q      +H+   R+GL             Y +CG
Sbjct: 460 EMRSDHQTPDSITIVSLLQGCASTGQLHLGKWIHSFVIRNGLRPCILVDTSLVDMYCKCG 519

Query: 175 CVALARKLFDSMPERDAISWNSVLSGYSKTGRVREAFYLFGAMRNEGIHPDRWTYGSLVS 354
            + +A++ F+ MP  D +SW++++ GY   G+   A   +      G+ P+   + S++S
Sbjct: 520 DLDIAQRCFNQMPSHDLVSWSAIIVGYGYHGKGETALRFYSKFLESGMKPNHVIFLSVLS 579

Query: 355 S 357
           S
Sbjct: 580 S 580


>ref|XP_004295288.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Fragaria vesca subsp. vesca]
          Length = 748

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 49/118 (41%), Positives = 70/118 (59%), Gaps = 2/118 (1%)
 Frame = +1

Query: 10  DMRRSDVRPNSVTFLSMLP--LDLVPLQCLHASAFRHGLESXXXXXXXXXXXYGRCGCVA 183
           +MR   + P+SVT LS+L    ++  +QCLH  A  +G ES           Y +CG V 
Sbjct: 153 EMRHDGIHPSSVTLLSLLSGASEVAHVQCLHGCAVVYGFESDMCLVNSMLNVYCKCGRVE 212

Query: 184 LARKLFDSMPERDAISWNSVLSGYSKTGRVREAFYLFGAMRNEGIHPDRWTYGSLVSS 357
             R LF+ M  RD +SWNS++SGY+++G VRE F L   MR EG+ PD+ TY S+ ++
Sbjct: 213 DGRDLFEYMNGRDTVSWNSLISGYAQSGDVREVFQLLYKMRVEGVVPDKQTYASVAAT 270



 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 42/126 (33%), Positives = 62/126 (49%), Gaps = 12/126 (9%)
 Frame = +1

Query: 13  MRRSDVRPNSVTFLSMLPLDLVPLQCLHASAFRHGLE-----------SXXXXXXXXXXX 159
           M ++ + P++ TF S+L        C   + F HG+            S           
Sbjct: 52  MLKAHIPPDTHTFPSLLKA------CTSLNLFGHGVSLHQRVVVNGFFSDAYIASSLINL 105

Query: 160 YGRCGCVALARKLFDSMPER-DAISWNSVLSGYSKTGRVREAFYLFGAMRNEGIHPDRWT 336
           Y + G V  ARK+FD+MPER + + W S++  YS+ G V  AF +F  MR++GIHP   T
Sbjct: 106 YAKLGHVQNARKVFDTMPERKNVVPWTSIIGCYSRAGSVEVAFGMFSEMRHDGIHPSSVT 165

Query: 337 YGSLVS 354
             SL+S
Sbjct: 166 LLSLLS 171



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 37/120 (30%), Positives = 54/120 (45%), Gaps = 5/120 (4%)
 Frame = +1

Query: 13  MRRSDVRPNSVTFLSMLP----LDLVPL-QCLHASAFRHGLESXXXXXXXXXXXYGRCGC 177
           M  S   P+S T  S L     L    L   +H    R G+             Y +C  
Sbjct: 350 MLESRTEPSSATIASALAACAQLGSFELGTSIHGYVLRQGMRLDIPAQNSLVTMYAKCAR 409

Query: 178 VALARKLFDSMPERDAISWNSVLSGYSKTGRVREAFYLFGAMRNEGIHPDRWTYGSLVSS 357
           +  +R  F SM +RD +SWN++++GY++ G + EA  LF  MR     PD  T  SL+ +
Sbjct: 410 LDQSRAAFQSMSKRDLVSWNAIVAGYAQNGHLGEALVLFSEMRATLQKPDSLTVVSLLQA 469


>gb|ESW19690.1| hypothetical protein PHAVU_006G147000g [Phaseolus vulgaris]
          Length = 764

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 51/121 (42%), Positives = 70/121 (57%), Gaps = 3/121 (2%)
 Frame = +1

Query: 1   FLRD-MRRSDVRPNSVTFLSML--PLDLVPLQCLHASAFRHGLESXXXXXXXXXXXYGRC 171
           FL D MRR  + P SVT LS+L    +L  +QCLH     +G  S           YG+C
Sbjct: 156 FLFDGMRRQGIPPTSVTMLSLLLGVSELATVQCLHGCVISYGFMSDTNLSNSMLNVYGKC 215

Query: 172 GCVALARKLFDSMPERDAISWNSVLSGYSKTGRVREAFYLFGAMRNEGIHPDRWTYGSLV 351
           G +  +RKLFD M ERD +SWNS++S Y++ G + E   L   MR +G+  DR T+GS++
Sbjct: 216 GNIDDSRKLFDYMDERDLVSWNSLISAYAQIGNLCEVLLLLKTMRVQGVELDRQTFGSVL 275

Query: 352 S 354
           S
Sbjct: 276 S 276



 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 42/122 (34%), Positives = 62/122 (50%), Gaps = 5/122 (4%)
 Frame = +1

Query: 13  MRRSDVRPNSVTFLSML----PLDLVPLQC-LHASAFRHGLESXXXXXXXXXXXYGRCGC 177
           M ++ V  ++ TF S+L     L+L  L   LH      GL             Y + GC
Sbjct: 60  MLKTHVPSDAYTFPSLLRACSSLNLFSLGLSLHQRVLVKGLSIDPYIASSLINFYAKFGC 119

Query: 178 VALARKLFDSMPERDAISWNSVLSGYSKTGRVREAFYLFGAMRNEGIHPDRWTYGSLVSS 357
             +ARK+FD MP R+ + W +++  YS+ G V EAF+LF  MR +GI P   T  SL+  
Sbjct: 120 ADVARKVFDFMPVRNVVPWTTIIGCYSRLGHVPEAFFLFDGMRRQGIPPTSVTMLSLLLG 179

Query: 358 IN 363
           ++
Sbjct: 180 VS 181



 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 5/120 (4%)
 Frame = +1

Query: 7   RDMRRSDVRPNSVTFLSMLP----LDLVPL-QCLHASAFRHGLESXXXXXXXXXXXYGRC 171
           R M +  V+P++ T  S++     L    L   +H    R  L             Y +C
Sbjct: 358 RRMLKFKVKPSTATMASVITACAQLGSFNLGTSIHGYIIRQELHMDIAIQNALVTMYAKC 417

Query: 172 GCVALARKLFDSMPERDAISWNSVLSGYSKTGRVREAFYLFGAMRNEGIHPDRWTYGSLV 351
           G +  +  +F+ M +RD +SWN++++GY++ G V +A +LF  MR++   PD  T  SL+
Sbjct: 418 GHLDQSSIVFNMMDKRDLVSWNAMVTGYAQNGYVCKAMFLFNEMRSDHQTPDSITIISLL 477


>ref|XP_003534717.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Glycine max]
          Length = 755

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 46/117 (39%), Positives = 67/117 (57%), Gaps = 2/117 (1%)
 Frame = +1

Query: 10  DMRRSDVRPNSVTFLSML--PLDLVPLQCLHASAFRHGLESXXXXXXXXXXXYGRCGCVA 183
           +MRR  ++P+SVT LS+L    +L  +QCLH  A  +G  S           YG+CG + 
Sbjct: 152 EMRRQGIQPSSVTVLSLLFGVSELAHVQCLHGCAILYGFMSDINLSNSMLNVYGKCGNIE 211

Query: 184 LARKLFDSMPERDAISWNSVLSGYSKTGRVREAFYLFGAMRNEGIHPDRWTYGSLVS 354
            +RKLFD M  RD +SWNS++S Y++ G + E   L   MR +G      T+GS++S
Sbjct: 212 YSRKLFDYMDHRDLVSWNSLISAYAQIGNICEVLLLLKTMRLQGFEAGPQTFGSVLS 268



 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 39/106 (36%), Positives = 55/106 (51%)
 Frame = +1

Query: 46  TFLSMLPLDLVPLQCLHASAFRHGLESXXXXXXXXXXXYGRCGCVALARKLFDSMPERDA 225
           +FL++  L L     LH      GL             Y + G   +ARK+FD MPER+ 
Sbjct: 72  SFLNLFSLGLT----LHQRILVSGLSLDAYIASSLINFYAKFGFADVARKVFDYMPERNV 127

Query: 226 ISWNSVLSGYSKTGRVREAFYLFGAMRNEGIHPDRWTYGSLVSSIN 363
           + W +++  YS+TGRV EAF LF  MR +GI P   T  SL+  ++
Sbjct: 128 VPWTTIIGCYSRTGRVPEAFSLFDEMRRQGIQPSSVTVLSLLFGVS 173



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 26/64 (40%), Positives = 41/64 (64%)
 Frame = +1

Query: 160 YGRCGCVALARKLFDSMPERDAISWNSVLSGYSKTGRVREAFYLFGAMRNEGIHPDRWTY 339
           Y +CG +  +  +FD M  RD +SWN++++GY++ G V EA +LF  MR++   PD  T 
Sbjct: 406 YAKCGHLDQSSIVFDMMNRRDLVSWNAMVTGYAQNGYVCEALFLFNEMRSDNQTPDSITI 465

Query: 340 GSLV 351
            SL+
Sbjct: 466 VSLL 469



 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 31/121 (25%), Positives = 57/121 (47%), Gaps = 5/121 (4%)
 Frame = +1

Query: 10  DMRRSDVRPNSVTFLSMLPLDLVPLQC-----LHASAFRHGLESXXXXXXXXXXXYGRCG 174
           +MR  +  P+S+T +S+L       Q      +H+   R+GL             Y +CG
Sbjct: 452 EMRSDNQTPDSITIVSLLQGCASTGQLHLGKWIHSFVIRNGLRPCILVDTSLVDMYCKCG 511

Query: 175 CVALARKLFDSMPERDAISWNSVLSGYSKTGRVREAFYLFGAMRNEGIHPDRWTYGSLVS 354
            +  A++ F+ MP  D +SW++++ GY   G+   A   +      G+ P+   + S++S
Sbjct: 512 DLDTAQRCFNQMPSHDLVSWSAIIVGYGYHGKGEAALRFYSKFLESGMKPNHVIFLSVLS 571

Query: 355 S 357
           S
Sbjct: 572 S 572


>ref|XP_004486315.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Cicer arietinum]
          Length = 740

 Score = 89.7 bits (221), Expect = 3e-16
 Identities = 48/116 (41%), Positives = 67/116 (57%), Gaps = 2/116 (1%)
 Frame = +1

Query: 13  MRRSDVRPNSVTFLSML--PLDLVPLQCLHASAFRHGLESXXXXXXXXXXXYGRCGCVAL 186
           MR   ++P+SVT LS+L    +L  +QCLH  A   G  S           YG+CG +A 
Sbjct: 145 MRYQGIQPSSVTLLSLLFGVSELSHVQCLHGCATFFGFMSDLNLSNSMLNLYGKCGSIAD 204

Query: 187 ARKLFDSMPERDAISWNSVLSGYSKTGRVREAFYLFGAMRNEGIHPDRWTYGSLVS 354
            RKLFD M +RD +SWNS+LS Y++ G V E   L   M+ +G+ P   T+GS++S
Sbjct: 205 CRKLFDCMDQRDIVSWNSLLSSYAQIGDVCEVLLLLETMKVQGLEPGLQTFGSVLS 260



 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 5/128 (3%)
 Frame = +1

Query: 1   FLRDMRRSDVRPNSVTFLSMLPL-----DLVPLQCLHASAFRHGLESXXXXXXXXXXXYG 165
           F  +MR   +RP+S+T +S+L        L P + +H    R+GL             Y 
Sbjct: 441 FFNEMRSCQLRPDSITAVSLLQGCASTGQLHPGKWIHGFVIRNGLRPCIVVDTSLVDMYC 500

Query: 166 RCGCVALARKLFDSMPERDAISWNSVLSGYSKTGRVREAFYLFGAMRNEGIHPDRWTYGS 345
           +CG +  A++ F+ MP +D +SW+++++GY   G+   A  L+       I P+   + S
Sbjct: 501 KCGDLDTAQRCFNQMPGQDLVSWSAIIAGYGYHGKGETALRLYSKFLESSIKPNHVIFLS 560

Query: 346 LVSSINTS 369
           ++SS + S
Sbjct: 561 VLSSCSHS 568



 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 41/122 (33%), Positives = 61/122 (50%), Gaps = 5/122 (4%)
 Frame = +1

Query: 13  MRRSDVRPNSVTFLSMLP----LDLVPLQC-LHASAFRHGLESXXXXXXXXXXXYGRCGC 177
           M  S +  ++ TF S+L     L+L  L   LH     +GL +           Y + G 
Sbjct: 44  MLNSHIPSDAYTFPSLLKACSSLNLFHLGLTLHQRILVNGLSTDSYIASSLINFYVKFGY 103

Query: 178 VALARKLFDSMPERDAISWNSVLSGYSKTGRVREAFYLFGAMRNEGIHPDRWTYGSLVSS 357
              ARK+FD MP+++ + W +++  YSK G V EAF LF  MR +GI P   T  SL+  
Sbjct: 104 SYFARKVFDFMPDKNVVPWTTIIGCYSKMGNVDEAFSLFHQMRYQGIQPSSVTLLSLLFG 163

Query: 358 IN 363
           ++
Sbjct: 164 VS 165


>ref|XP_004158080.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Cucumis sativus]
          Length = 762

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 49/125 (39%), Positives = 69/125 (55%), Gaps = 7/125 (5%)
 Frame = +1

Query: 10  DMRRSDVRPNSVTFLSMLP-------LDLVPLQCLHASAFRHGLESXXXXXXXXXXXYGR 168
           +MR S+++PNSVTF  +L        LDL     LH  A   GLE            Y +
Sbjct: 149 EMRHSEIKPNSVTFACVLSVCASEAMLDLGTQ--LHGIAVGCGLELDSPVANTLLAMYSK 206

Query: 169 CGCVALARKLFDSMPERDAISWNSVLSGYSKTGRVREAFYLFGAMRNEGIHPDRWTYGSL 348
           C C+  ARKLFD++P+ D +SWN ++SGY + G + EA +LF  M + GI PD  T+ S 
Sbjct: 207 CQCLQAARKLFDTLPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASF 266

Query: 349 VSSIN 363
           +  +N
Sbjct: 267 LPCVN 271



 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 28/89 (31%), Positives = 46/89 (51%)
 Frame = +1

Query: 91  LHASAFRHGLESXXXXXXXXXXXYGRCGCVALARKLFDSMPERDAISWNSVLSGYSKTGR 270
           +H    +  L S           Y +CG +  +R++FD M E++ +SWNS++S Y   G 
Sbjct: 484 IHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQEKNEVSWNSIISAYGNHGD 543

Query: 271 VREAFYLFGAMRNEGIHPDRWTYGSLVSS 357
           ++E   LF  M   GI PD  T+  ++S+
Sbjct: 544 LKECLALFHEMLRNGIQPDHVTFLGIISA 572



 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 5/105 (4%)
 Frame = +1

Query: 28  VRPNSVTFLSMLPL--DLVPLQC---LHASAFRHGLESXXXXXXXXXXXYGRCGCVALAR 192
           ++P SVTF S+ P    L  L     LH S  +  L+            Y +CG + LA 
Sbjct: 357 MKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLAC 416

Query: 193 KLFDSMPERDAISWNSVLSGYSKTGRVREAFYLFGAMRNEGIHPD 327
           ++F+ + E+DAI WNS+++  S+ GR  EA  LF  M  EG   D
Sbjct: 417 RVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYD 461


>ref|XP_004135750.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Cucumis sativus]
          Length = 762

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 49/125 (39%), Positives = 68/125 (54%), Gaps = 7/125 (5%)
 Frame = +1

Query: 10  DMRRSDVRPNSVTFLSMLP-------LDLVPLQCLHASAFRHGLESXXXXXXXXXXXYGR 168
           +MR S+++PNSVTF  +L        LDL     LH  A   GLE            Y +
Sbjct: 149 EMRHSEIKPNSVTFACVLSVCASEAMLDLGTQ--LHGIAVSCGLELDSPVANTLLAMYSK 206

Query: 169 CGCVALARKLFDSMPERDAISWNSVLSGYSKTGRVREAFYLFGAMRNEGIHPDRWTYGSL 348
           C C+  ARKLFD+ P+ D +SWN ++SGY + G + EA +LF  M + GI PD  T+ S 
Sbjct: 207 CQCLQAARKLFDTSPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASF 266

Query: 349 VSSIN 363
           +  +N
Sbjct: 267 LPCVN 271



 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 29/89 (32%), Positives = 46/89 (51%)
 Frame = +1

Query: 91  LHASAFRHGLESXXXXXXXXXXXYGRCGCVALARKLFDSMPERDAISWNSVLSGYSKTGR 270
           +H    +  L S           Y +CG +  +R++FD M ER+ +SWNS++S Y   G 
Sbjct: 484 IHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQERNEVSWNSIISAYGNHGD 543

Query: 271 VREAFYLFGAMRNEGIHPDRWTYGSLVSS 357
           ++E   LF  M   GI PD  T+  ++S+
Sbjct: 544 LKECLALFHEMLRNGIQPDHVTFLGIISA 572



 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 5/105 (4%)
 Frame = +1

Query: 28  VRPNSVTFLSMLPL--DLVPLQC---LHASAFRHGLESXXXXXXXXXXXYGRCGCVALAR 192
           ++P SVTF S+ P    L  L     LH S  +  L+            Y +CG + LA 
Sbjct: 357 MKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLAC 416

Query: 193 KLFDSMPERDAISWNSVLSGYSKTGRVREAFYLFGAMRNEGIHPD 327
           ++F+ + E+DAI WNS+++  S+ GR  EA  LF  M  EG   D
Sbjct: 417 RVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYD 461


>ref|XP_002874797.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297320634|gb|EFH51056.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 748

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 45/126 (35%), Positives = 72/126 (57%), Gaps = 2/126 (1%)
 Frame = +1

Query: 4   LRDMRRSDVRPNSVTFLSMLP--LDLVPLQCLHASAFRHGLESXXXXXXXXXXXYGRCGC 177
           +++MR   ++P+ VTFL ML    ++  LQCLHA A  +G E            Y +C  
Sbjct: 135 VKEMRFQGIKPSPVTFLEMLSGISEITQLQCLHAFALVYGFECDIAVMNSMLNLYCKCDR 194

Query: 178 VALARKLFDSMPERDAISWNSVLSGYSKTGRVREAFYLFGAMRNEGIHPDRWTYGSLVSS 357
           V  A++LFD M +RD +SWN+++SG++    + E   L   MR++G+ PD+ T+G+ +S 
Sbjct: 195 VGDAKELFDQMEQRDMVSWNTMISGFAFVANMSEILKLLYRMRDDGLRPDQQTFGASLSV 254

Query: 358 INTSED 375
             T  D
Sbjct: 255 SGTMCD 260



 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 6/123 (4%)
 Frame = +1

Query: 13  MRRSDVRPNSVTFLSMLPLDLVPLQCL------HASAFRHGLESXXXXXXXXXXXYGRCG 174
           M  + + P++ TF S+L      LQ L      H     +G  S           Y + G
Sbjct: 37  MLANKLLPDTFTFPSLLKA-CTSLQLLSFGLSIHQKVLVNGFSSDSYISSSLVNLYAKFG 95

Query: 175 CVALARKLFDSMPERDAISWNSVLSGYSKTGRVREAFYLFGAMRNEGIHPDRWTYGSLVS 354
            +  ARK+FD M +RD + W +++  YS+ G   EA  L   MR +GI P   T+  ++S
Sbjct: 96  LLGHARKVFDEMRDRDVVHWTAMIGCYSRAGIFGEACSLVKEMRFQGIKPSPVTFLEMLS 155

Query: 355 SIN 363
            I+
Sbjct: 156 GIS 158


>ref|XP_002867315.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297313151|gb|EFH43574.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 598

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 49/129 (37%), Positives = 71/129 (55%), Gaps = 6/129 (4%)
 Frame = +1

Query: 1   FLRDMRRSDVRPNSVTFLSMLPL------DLVPLQCLHASAFRHGLESXXXXXXXXXXXY 162
           F R M+R ++RPN VT LS+LP        L  ++ +H  +FRHG  S           Y
Sbjct: 238 FFRAMQRENLRPNRVTLLSVLPACVELGYGLRLVKEIHGFSFRHGFHSDDRLIAAFMTMY 297

Query: 163 GRCGCVALARKLFDSMPERDAISWNSVLSGYSKTGRVREAFYLFGAMRNEGIHPDRWTYG 342
            RCG V+L+R LF++   RD + W+S++SGY++ G   EA  L   MR EG  P+  T  
Sbjct: 298 CRCGSVSLSRLLFETSKVRDVVMWSSMISGYAENGDCSEAMNLLSQMRKEGSEPNSVTLL 357

Query: 343 SLVSSINTS 369
           ++VS+   S
Sbjct: 358 AVVSACTHS 366



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 5/125 (4%)
 Frame = +1

Query: 4   LRDMRRSDVRPNSVTFLSMLPL-----DLVPLQCLHASAFRHGLESXXXXXXXXXXXYGR 168
           L  MR+    PNSVT L+++        L     +H+   + G  S           Y +
Sbjct: 341 LSQMRKEGSEPNSVTLLAVVSACTHSASLKIASTVHSQILKCGFMSHILLSNALIDMYAK 400

Query: 169 CGCVALARKLFDSMPERDAISWNSVLSGYSKTGRVREAFYLFGAMRNEGIHPDRWTYGSL 348
           CG +  AR++F  + E+D +SW+S+++ Y   G   EA  +F  M   G   D   + ++
Sbjct: 401 CGSLPAAREVFYELNEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKAGHEVDGMAFLAV 460

Query: 349 VSSIN 363
           +S+ N
Sbjct: 461 LSACN 465


>ref|XP_006348147.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like isoform X1 [Solanum tuberosum]
           gi|565362832|ref|XP_006348148.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g04370-like isoform X2 [Solanum tuberosum]
           gi|565362834|ref|XP_006348149.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g04370-like isoform X3 [Solanum tuberosum]
          Length = 753

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 44/118 (37%), Positives = 66/118 (55%), Gaps = 2/118 (1%)
 Frame = +1

Query: 13  MRRSDVRPNSVTFLSMLP--LDLVPLQCLHASAFRHGLESXXXXXXXXXXXYGRCGCVAL 186
           M +  ++P SVT L++L    + + ++CLH    ++G              YG+CG +  
Sbjct: 155 MLQEGIKPTSVTLLTLLSGVSESIHVECLHTCIVKYGFMGHIALLNSMLNVYGKCGRIEY 214

Query: 187 ARKLFDSMPERDAISWNSVLSGYSKTGRVREAFYLFGAMRNEGIHPDRWTYGSLVSSI 360
           ARKLF+ M E+D +SWNS++SG +  G   E   L   MR+E   PD  TYG+LVS+I
Sbjct: 215 ARKLFEWMDEKDIVSWNSLVSGCALVGNTEELLTLMYRMRSENSWPDHQTYGALVSAI 272



 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 41/130 (31%), Positives = 62/130 (47%), Gaps = 11/130 (8%)
 Frame = +1

Query: 13  MRRSDVRPNSVTFLSMLPLDLVPLQCLHASAFRHGL-----------ESXXXXXXXXXXX 159
           M +S V P+  TF ++L        C+  +  RHGL            S           
Sbjct: 54  MLKSSVPPDPFTFPTLLKA------CISLNLLRHGLLLHQHVVVNGFSSDSYIGSSLISF 107

Query: 160 YGRCGCVALARKLFDSMPERDAISWNSVLSGYSKTGRVREAFYLFGAMRNEGIHPDRWTY 339
           Y   G    A+K+FD+MPER+ + W +V+  Y++TG    AFYL+ +M  EGI P   T 
Sbjct: 108 YSSFGLTEHAQKVFDTMPERNIVPWTTVIGCYTRTGDFEHAFYLYNSMLQEGIKPTSVTL 167

Query: 340 GSLVSSINTS 369
            +L+S ++ S
Sbjct: 168 LTLLSGVSES 177


>gb|EOY31979.1| Pentatricopeptide repeat superfamily protein isoform 4 [Theobroma
           cacao] gi|508784726|gb|EOY31982.1| Pentatricopeptide
           repeat superfamily protein isoform 4 [Theobroma cacao]
          Length = 619

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 50/124 (40%), Positives = 68/124 (54%), Gaps = 5/124 (4%)
 Frame = +1

Query: 1   FLRDMRRSDVRPNSVT--FLSMLPLDLVPL---QCLHASAFRHGLESXXXXXXXXXXXYG 165
           F   M+   ++PN  T  FL +   +L+ L   Q  H+S FR GL+            Y 
Sbjct: 114 FYYQMKFLGLKPNKFTYPFLFIACANLLELSHGQAAHSSVFRLGLDVDSHTTHSLITMYA 173

Query: 166 RCGCVALARKLFDSMPERDAISWNSVLSGYSKTGRVREAFYLFGAMRNEGIHPDRWTYGS 345
           RCG +  AR++FD + ERD +SWNS++SGYSK G   EA  LFG MR EG  PD  T  S
Sbjct: 174 RCGELGSARRVFDEISERDLVSWNSMISGYSKMGYANEAVGLFGKMREEGFVPDEMTLVS 233

Query: 346 LVSS 357
           ++ +
Sbjct: 234 VLGA 237



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 35/120 (29%), Positives = 61/120 (50%), Gaps = 5/120 (4%)
 Frame = +1

Query: 13  MRRSDVRPNSVTFLSMLPL-----DLVPLQCLHASAFRHGLESXXXXXXXXXXXYGRCGC 177
           MR     P+ +T +S+L       DL   + +   A  H ++            YG+CG 
Sbjct: 219 MREEGFVPDEMTLVSVLGACGDLGDLSLGRWVEGFAIEHKIKLNSFIASALIGMYGKCGD 278

Query: 178 VALARKLFDSMPERDAISWNSVLSGYSKTGRVREAFYLFGAMRNEGIHPDRWTYGSLVSS 357
              AR +FD M  +D ++WN++++GY++ G   EA  LF  M++ G+ PD+ T   ++S+
Sbjct: 279 FVSARGVFDGMEGKDVVTWNAMITGYAQNGMSDEAIKLFHGMKDAGVIPDKITLVGVLSA 338


>gb|EOY31977.1| Pentatricopeptide repeat superfamily protein isoform 2 [Theobroma
           cacao] gi|508784722|gb|EOY31978.1| Pentatricopeptide
           repeat superfamily protein isoform 2 [Theobroma cacao]
           gi|508784724|gb|EOY31980.1| Pentatricopeptide repeat
           superfamily protein isoform 2 [Theobroma cacao]
           gi|508784725|gb|EOY31981.1| Pentatricopeptide repeat
           superfamily protein isoform 2 [Theobroma cacao]
          Length = 565

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 50/124 (40%), Positives = 68/124 (54%), Gaps = 5/124 (4%)
 Frame = +1

Query: 1   FLRDMRRSDVRPNSVT--FLSMLPLDLVPL---QCLHASAFRHGLESXXXXXXXXXXXYG 165
           F   M+   ++PN  T  FL +   +L+ L   Q  H+S FR GL+            Y 
Sbjct: 60  FYYQMKFLGLKPNKFTYPFLFIACANLLELSHGQAAHSSVFRLGLDVDSHTTHSLITMYA 119

Query: 166 RCGCVALARKLFDSMPERDAISWNSVLSGYSKTGRVREAFYLFGAMRNEGIHPDRWTYGS 345
           RCG +  AR++FD + ERD +SWNS++SGYSK G   EA  LFG MR EG  PD  T  S
Sbjct: 120 RCGELGSARRVFDEISERDLVSWNSMISGYSKMGYANEAVGLFGKMREEGFVPDEMTLVS 179

Query: 346 LVSS 357
           ++ +
Sbjct: 180 VLGA 183



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 35/120 (29%), Positives = 61/120 (50%), Gaps = 5/120 (4%)
 Frame = +1

Query: 13  MRRSDVRPNSVTFLSMLPL-----DLVPLQCLHASAFRHGLESXXXXXXXXXXXYGRCGC 177
           MR     P+ +T +S+L       DL   + +   A  H ++            YG+CG 
Sbjct: 165 MREEGFVPDEMTLVSVLGACGDLGDLSLGRWVEGFAIEHKIKLNSFIASALIGMYGKCGD 224

Query: 178 VALARKLFDSMPERDAISWNSVLSGYSKTGRVREAFYLFGAMRNEGIHPDRWTYGSLVSS 357
              AR +FD M  +D ++WN++++GY++ G   EA  LF  M++ G+ PD+ T   ++S+
Sbjct: 225 FVSARGVFDGMEGKDVVTWNAMITGYAQNGMSDEAIKLFHGMKDAGVIPDKITLVGVLSA 284


>gb|EOY31976.1| Pentatricopeptide repeat superfamily protein isoform 1 [Theobroma
           cacao]
          Length = 656

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 50/124 (40%), Positives = 68/124 (54%), Gaps = 5/124 (4%)
 Frame = +1

Query: 1   FLRDMRRSDVRPNSVT--FLSMLPLDLVPL---QCLHASAFRHGLESXXXXXXXXXXXYG 165
           F   M+   ++PN  T  FL +   +L+ L   Q  H+S FR GL+            Y 
Sbjct: 151 FYYQMKFLGLKPNKFTYPFLFIACANLLELSHGQAAHSSVFRLGLDVDSHTTHSLITMYA 210

Query: 166 RCGCVALARKLFDSMPERDAISWNSVLSGYSKTGRVREAFYLFGAMRNEGIHPDRWTYGS 345
           RCG +  AR++FD + ERD +SWNS++SGYSK G   EA  LFG MR EG  PD  T  S
Sbjct: 211 RCGELGSARRVFDEISERDLVSWNSMISGYSKMGYANEAVGLFGKMREEGFVPDEMTLVS 270

Query: 346 LVSS 357
           ++ +
Sbjct: 271 VLGA 274



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 35/120 (29%), Positives = 61/120 (50%), Gaps = 5/120 (4%)
 Frame = +1

Query: 13  MRRSDVRPNSVTFLSMLPL-----DLVPLQCLHASAFRHGLESXXXXXXXXXXXYGRCGC 177
           MR     P+ +T +S+L       DL   + +   A  H ++            YG+CG 
Sbjct: 256 MREEGFVPDEMTLVSVLGACGDLGDLSLGRWVEGFAIEHKIKLNSFIASALIGMYGKCGD 315

Query: 178 VALARKLFDSMPERDAISWNSVLSGYSKTGRVREAFYLFGAMRNEGIHPDRWTYGSLVSS 357
              AR +FD M  +D ++WN++++GY++ G   EA  LF  M++ G+ PD+ T   ++S+
Sbjct: 316 FVSARGVFDGMEGKDVVTWNAMITGYAQNGMSDEAIKLFHGMKDAGVIPDKITLVGVLSA 375