BLASTX nr result
ID: Zingiber24_contig00049357
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00049357
(219 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXC27690.1| DNA mismatch repair protein mutS [Morus notabilis] 105 6e-21
gb|EEE61302.1| hypothetical protein OsJ_15393 [Oryza sativa Japo... 102 4e-20
gb|EEC77599.1| hypothetical protein OsI_16565 [Oryza sativa Indi... 102 4e-20
emb|CAH67334.1| OSIGBa0157A06.3 [Oryza sativa Indica Group] 102 4e-20
ref|NP_001053261.1| Os04g0507000 [Oryza sativa Japonica Group] g... 102 4e-20
emb|CAE05685.2| OSJNBb0002J11.12 [Oryza sativa Japonica Group] 102 4e-20
emb|CAE04716.1| OSJNBa0043L24.4 [Oryza sativa Japonica Group] 102 4e-20
ref|XP_006340884.1| PREDICTED: DNA mismatch repair protein MSH1,... 102 7e-20
ref|XP_006340883.1| PREDICTED: DNA mismatch repair protein MSH1,... 102 7e-20
gb|EMT01808.1| DNA mismatch repair protein mutS [Aegilops tauschii] 102 7e-20
ref|XP_003581402.1| PREDICTED: uncharacterized protein LOC100835... 102 7e-20
ref|XP_006854326.1| hypothetical protein AMTR_s00039p00125380 [A... 101 1e-19
ref|XP_004247788.1| PREDICTED: DNA mismatch repair protein MSH1,... 101 1e-19
gb|AAX53097.1| DNA mismatch repair protein [Solanum lycopersicum] 101 1e-19
ref|XP_004976164.1| PREDICTED: DNA mismatch repair protein MSH1,... 100 2e-19
gb|EMJ26626.1| hypothetical protein PRUPE_ppa000475mg [Prunus pe... 100 3e-19
ref|XP_002448138.1| hypothetical protein SORBIDRAFT_06g021950 [S... 100 3e-19
ref|XP_006652491.1| PREDICTED: DNA mismatch repair protein MSH1,... 99 7e-19
gb|EMS61210.1| DNA mismatch repair protein mutS [Triticum urartu] 99 7e-19
ref|XP_002314510.1| chloroplast mutator family protein [Populus ... 98 1e-18
>gb|EXC27690.1| DNA mismatch repair protein mutS [Morus notabilis]
Length = 756
Score = 105 bits (262), Expect = 6e-21
Identities = 46/72 (63%), Positives = 60/72 (83%)
Frame = -1
Query: 216 IICQSKLIETYKKKSPSDLAEVKCHSVGAREQPPPSTVGTSNIYVLIRPDKTLYIGQTDD 37
+ICQ KLIE YKK+ S+L E+ C +GAREQPPPSTVG + +YV++RPDK LY+GQ+DD
Sbjct: 616 MICQRKLIELYKKEKTSELTEIHCVLIGAREQPPPSTVGAACVYVMLRPDKKLYVGQSDD 675
Query: 36 LVGRLRTHRTKE 1
L GR+RTHR+K+
Sbjct: 676 LEGRVRTHRSKD 687
>gb|EEE61302.1| hypothetical protein OsJ_15393 [Oryza sativa Japonica Group]
Length = 1227
Score = 102 bits (255), Expect = 4e-20
Identities = 49/71 (69%), Positives = 58/71 (81%)
Frame = -1
Query: 213 ICQSKLIETYKKKSPSDLAEVKCHSVGAREQPPPSTVGTSNIYVLIRPDKTLYIGQTDDL 34
IC+ KL++ Y K+S S+L EV C +VGAREQPPPSTVG S+IYV+IR D LYIGQTDDL
Sbjct: 1098 ICKKKLLDLYNKRSISELIEVVCVAVGAREQPPPSTVGRSSIYVIIRRDSKLYIGQTDDL 1157
Query: 33 VGRLRTHRTKE 1
VGRL HR+KE
Sbjct: 1158 VGRLSAHRSKE 1168
>gb|EEC77599.1| hypothetical protein OsI_16565 [Oryza sativa Indica Group]
Length = 1017
Score = 102 bits (255), Expect = 4e-20
Identities = 49/71 (69%), Positives = 58/71 (81%)
Frame = -1
Query: 213 ICQSKLIETYKKKSPSDLAEVKCHSVGAREQPPPSTVGTSNIYVLIRPDKTLYIGQTDDL 34
IC+ KL++ Y K+S S+L EV C +VGAREQPPPSTVG S+IYV+IR D LYIGQTDDL
Sbjct: 888 ICKKKLLDLYNKRSISELIEVVCVAVGAREQPPPSTVGRSSIYVIIRRDSKLYIGQTDDL 947
Query: 33 VGRLRTHRTKE 1
VGRL HR+KE
Sbjct: 948 VGRLSAHRSKE 958
>emb|CAH67334.1| OSIGBa0157A06.3 [Oryza sativa Indica Group]
Length = 1133
Score = 102 bits (255), Expect = 4e-20
Identities = 49/71 (69%), Positives = 58/71 (81%)
Frame = -1
Query: 213 ICQSKLIETYKKKSPSDLAEVKCHSVGAREQPPPSTVGTSNIYVLIRPDKTLYIGQTDDL 34
IC+ KL++ Y K+S S+L EV C +VGAREQPPPSTVG S+IYV+IR D LYIGQTDDL
Sbjct: 1004 ICKKKLLDLYNKRSISELIEVVCVAVGAREQPPPSTVGRSSIYVIIRRDSKLYIGQTDDL 1063
Query: 33 VGRLRTHRTKE 1
VGRL HR+KE
Sbjct: 1064 VGRLSAHRSKE 1074
>ref|NP_001053261.1| Os04g0507000 [Oryza sativa Japonica Group]
gi|113564832|dbj|BAF15175.1| Os04g0507000 [Oryza sativa
Japonica Group]
Length = 1132
Score = 102 bits (255), Expect = 4e-20
Identities = 49/71 (69%), Positives = 58/71 (81%)
Frame = -1
Query: 213 ICQSKLIETYKKKSPSDLAEVKCHSVGAREQPPPSTVGTSNIYVLIRPDKTLYIGQTDDL 34
IC+ KL++ Y K+S S+L EV C +VGAREQPPPSTVG S+IYV+IR D LYIGQTDDL
Sbjct: 1003 ICKKKLLDLYNKRSISELIEVVCVAVGAREQPPPSTVGRSSIYVIIRRDSKLYIGQTDDL 1062
Query: 33 VGRLRTHRTKE 1
VGRL HR+KE
Sbjct: 1063 VGRLSAHRSKE 1073
>emb|CAE05685.2| OSJNBb0002J11.12 [Oryza sativa Japonica Group]
Length = 785
Score = 102 bits (255), Expect = 4e-20
Identities = 49/71 (69%), Positives = 58/71 (81%)
Frame = -1
Query: 213 ICQSKLIETYKKKSPSDLAEVKCHSVGAREQPPPSTVGTSNIYVLIRPDKTLYIGQTDDL 34
IC+ KL++ Y K+S S+L EV C +VGAREQPPPSTVG S+IYV+IR D LYIGQTDDL
Sbjct: 656 ICKKKLLDLYNKRSISELIEVVCVAVGAREQPPPSTVGRSSIYVIIRRDSKLYIGQTDDL 715
Query: 33 VGRLRTHRTKE 1
VGRL HR+KE
Sbjct: 716 VGRLSAHRSKE 726
>emb|CAE04716.1| OSJNBa0043L24.4 [Oryza sativa Japonica Group]
Length = 1037
Score = 102 bits (255), Expect = 4e-20
Identities = 49/71 (69%), Positives = 58/71 (81%)
Frame = -1
Query: 213 ICQSKLIETYKKKSPSDLAEVKCHSVGAREQPPPSTVGTSNIYVLIRPDKTLYIGQTDDL 34
IC+ KL++ Y K+S S+L EV C +VGAREQPPPSTVG S+IYV+IR D LYIGQTDDL
Sbjct: 908 ICKKKLLDLYNKRSISELIEVVCVAVGAREQPPPSTVGRSSIYVIIRRDSKLYIGQTDDL 967
Query: 33 VGRLRTHRTKE 1
VGRL HR+KE
Sbjct: 968 VGRLSAHRSKE 978
>ref|XP_006340884.1| PREDICTED: DNA mismatch repair protein MSH1, mitochondrial-like
isoform X2 [Solanum tuberosum]
Length = 931
Score = 102 bits (253), Expect = 7e-20
Identities = 44/72 (61%), Positives = 57/72 (79%)
Frame = -1
Query: 216 IICQSKLIETYKKKSPSDLAEVKCHSVGAREQPPPSTVGTSNIYVLIRPDKTLYIGQTDD 37
+IC+ KLIE YK K+PS++A V C + AREQP PST+G S++Y ++RPDK LY+GQTDD
Sbjct: 799 LICEKKLIELYKMKNPSEMAMVNCVLIAAREQPAPSTIGASSVYTMLRPDKKLYVGQTDD 858
Query: 36 LVGRLRTHRTKE 1
L GR+R HR KE
Sbjct: 859 LEGRVRAHRLKE 870
>ref|XP_006340883.1| PREDICTED: DNA mismatch repair protein MSH1, mitochondrial-like
isoform X1 [Solanum tuberosum]
Length = 1137
Score = 102 bits (253), Expect = 7e-20
Identities = 44/72 (61%), Positives = 57/72 (79%)
Frame = -1
Query: 216 IICQSKLIETYKKKSPSDLAEVKCHSVGAREQPPPSTVGTSNIYVLIRPDKTLYIGQTDD 37
+IC+ KLIE YK K+PS++A V C + AREQP PST+G S++Y ++RPDK LY+GQTDD
Sbjct: 1005 LICEKKLIELYKMKNPSEMAMVNCVLIAAREQPAPSTIGASSVYTMLRPDKKLYVGQTDD 1064
Query: 36 LVGRLRTHRTKE 1
L GR+R HR KE
Sbjct: 1065 LEGRVRAHRLKE 1076
>gb|EMT01808.1| DNA mismatch repair protein mutS [Aegilops tauschii]
Length = 1118
Score = 102 bits (253), Expect = 7e-20
Identities = 47/71 (66%), Positives = 58/71 (81%)
Frame = -1
Query: 213 ICQSKLIETYKKKSPSDLAEVKCHSVGAREQPPPSTVGTSNIYVLIRPDKTLYIGQTDDL 34
IC+ KL++ Y K+S S+L EV C +VGAREQPPPSTVG S+IY++IR D LY+GQTDDL
Sbjct: 988 ICKDKLLDLYNKRSISELVEVVCVTVGAREQPPPSTVGRSSIYIIIRRDNKLYVGQTDDL 1047
Query: 33 VGRLRTHRTKE 1
VGRL HR+KE
Sbjct: 1048 VGRLGAHRSKE 1058
>ref|XP_003581402.1| PREDICTED: uncharacterized protein LOC100835189 [Brachypodium
distachyon]
Length = 1126
Score = 102 bits (253), Expect = 7e-20
Identities = 47/71 (66%), Positives = 58/71 (81%)
Frame = -1
Query: 213 ICQSKLIETYKKKSPSDLAEVKCHSVGAREQPPPSTVGTSNIYVLIRPDKTLYIGQTDDL 34
IC+ KL++ Y K+S S+L EV C +VGAREQPPPSTVG S+IY++IR D LY+GQTDDL
Sbjct: 996 ICKDKLLDLYNKRSISELVEVVCVTVGAREQPPPSTVGRSSIYIVIRRDNKLYVGQTDDL 1055
Query: 33 VGRLRTHRTKE 1
VGRL HR+KE
Sbjct: 1056 VGRLAVHRSKE 1066
>ref|XP_006854326.1| hypothetical protein AMTR_s00039p00125380 [Amborella trichopoda]
gi|548858002|gb|ERN15793.1| hypothetical protein
AMTR_s00039p00125380 [Amborella trichopoda]
Length = 1196
Score = 101 bits (251), Expect = 1e-19
Identities = 45/72 (62%), Positives = 59/72 (81%)
Frame = -1
Query: 216 IICQSKLIETYKKKSPSDLAEVKCHSVGAREQPPPSTVGTSNIYVLIRPDKTLYIGQTDD 37
IICQ KL E Y +K + LAE+ C +V ++EQPPPST+GTS++YVL+RPD LY+GQTDD
Sbjct: 1064 IICQRKLNELYVQKCIAALAEISCVTVDSKEQPPPSTIGTSSVYVLVRPDLKLYVGQTDD 1123
Query: 36 LVGRLRTHRTKE 1
L+GR+RTHR+ E
Sbjct: 1124 LIGRVRTHRSSE 1135
>ref|XP_004247788.1| PREDICTED: DNA mismatch repair protein MSH1, mitochondrial [Solanum
lycopersicum]
Length = 1137
Score = 101 bits (251), Expect = 1e-19
Identities = 43/72 (59%), Positives = 57/72 (79%)
Frame = -1
Query: 216 IICQSKLIETYKKKSPSDLAEVKCHSVGAREQPPPSTVGTSNIYVLIRPDKTLYIGQTDD 37
+IC+ KLIE YK K+PS++ V C + AREQP PST+G S++Y+++RPDK LY+GQTDD
Sbjct: 1005 LICEKKLIELYKMKNPSEMPMVNCVLIAAREQPAPSTIGASSVYIMLRPDKKLYVGQTDD 1064
Query: 36 LVGRLRTHRTKE 1
L GR+R HR KE
Sbjct: 1065 LEGRVRAHRLKE 1076
>gb|AAX53097.1| DNA mismatch repair protein [Solanum lycopersicum]
Length = 1124
Score = 101 bits (251), Expect = 1e-19
Identities = 43/72 (59%), Positives = 57/72 (79%)
Frame = -1
Query: 216 IICQSKLIETYKKKSPSDLAEVKCHSVGAREQPPPSTVGTSNIYVLIRPDKTLYIGQTDD 37
+IC+ KLIE YK K+PS++ V C + AREQP PST+G S++Y+++RPDK LY+GQTDD
Sbjct: 1005 LICEKKLIELYKMKNPSEMPMVNCVLIAAREQPAPSTIGASSVYIMLRPDKKLYVGQTDD 1064
Query: 36 LVGRLRTHRTKE 1
L GR+R HR KE
Sbjct: 1065 LEGRVRAHRLKE 1076
>ref|XP_004976164.1| PREDICTED: DNA mismatch repair protein MSH1, mitochondrial-like
[Setaria italica]
Length = 1128
Score = 100 bits (250), Expect = 2e-19
Identities = 47/72 (65%), Positives = 57/72 (79%)
Frame = -1
Query: 216 IICQSKLIETYKKKSPSDLAEVKCHSVGAREQPPPSTVGTSNIYVLIRPDKTLYIGQTDD 37
+IC+ KL++ Y K S +L +V C +VGAREQPPPSTVG S IYV+IR D LY+GQTDD
Sbjct: 997 VICKKKLLDLYNKSSIPELVDVFCVAVGAREQPPPSTVGRSCIYVIIRSDNKLYVGQTDD 1056
Query: 36 LVGRLRTHRTKE 1
LVGRLR HR+KE
Sbjct: 1057 LVGRLRAHRSKE 1068
>gb|EMJ26626.1| hypothetical protein PRUPE_ppa000475mg [Prunus persica]
Length = 1144
Score = 100 bits (248), Expect = 3e-19
Identities = 41/73 (56%), Positives = 59/73 (80%)
Frame = -1
Query: 219 MIICQSKLIETYKKKSPSDLAEVKCHSVGAREQPPPSTVGTSNIYVLIRPDKTLYIGQTD 40
++IC+ LIE YK++ S++ ++ C +GAREQPPPST+G S +YV++RPD+ LY+GQTD
Sbjct: 1011 IVICRKMLIELYKEEKTSEVTDIHCVPIGAREQPPPSTIGVSCVYVILRPDRRLYVGQTD 1070
Query: 39 DLVGRLRTHRTKE 1
DL GR+R HR+KE
Sbjct: 1071 DLEGRVRAHRSKE 1083
>ref|XP_002448138.1| hypothetical protein SORBIDRAFT_06g021950 [Sorghum bicolor]
gi|241939321|gb|EES12466.1| hypothetical protein
SORBIDRAFT_06g021950 [Sorghum bicolor]
Length = 1059
Score = 100 bits (248), Expect = 3e-19
Identities = 46/72 (63%), Positives = 57/72 (79%)
Frame = -1
Query: 216 IICQSKLIETYKKKSPSDLAEVKCHSVGAREQPPPSTVGTSNIYVLIRPDKTLYIGQTDD 37
+IC+ KL++ Y K S +L EV C +VGAREQPPPSTVG S+IYV+IR D LY+GQTDD
Sbjct: 926 MICKKKLLDLYNKSSIPELVEVVCVAVGAREQPPPSTVGRSSIYVIIRSDNKLYVGQTDD 985
Query: 36 LVGRLRTHRTKE 1
L+GRL HR+KE
Sbjct: 986 LLGRLHAHRSKE 997
>ref|XP_006652491.1| PREDICTED: DNA mismatch repair protein MSH1, mitochondrial-like
[Oryza brachyantha]
Length = 1072
Score = 98.6 bits (244), Expect = 7e-19
Identities = 44/71 (61%), Positives = 57/71 (80%)
Frame = -1
Query: 213 ICQSKLIETYKKKSPSDLAEVKCHSVGAREQPPPSTVGTSNIYVLIRPDKTLYIGQTDDL 34
IC+ KL++ Y K+ +++ EV C +VGAREQPPPSTVG S+IY++IR D LY+GQTDDL
Sbjct: 942 ICKKKLLDLYNKRKIAEMIEVVCVAVGAREQPPPSTVGRSSIYIIIRRDNKLYVGQTDDL 1001
Query: 33 VGRLRTHRTKE 1
VGRL HR+KE
Sbjct: 1002 VGRLSAHRSKE 1012
>gb|EMS61210.1| DNA mismatch repair protein mutS [Triticum urartu]
Length = 714
Score = 98.6 bits (244), Expect = 7e-19
Identities = 45/71 (63%), Positives = 57/71 (80%)
Frame = -1
Query: 213 ICQSKLIETYKKKSPSDLAEVKCHSVGAREQPPPSTVGTSNIYVLIRPDKTLYIGQTDDL 34
IC+ KL++ Y K+S S+L EV C +VG REQPPPSTVG S+IY++IR D LY+GQTDDL
Sbjct: 584 ICKDKLLDLYNKRSISELVEVVCVTVGPREQPPPSTVGRSSIYIIIRRDNKLYVGQTDDL 643
Query: 33 VGRLRTHRTKE 1
VGRL HR++E
Sbjct: 644 VGRLGAHRSQE 654
>ref|XP_002314510.1| chloroplast mutator family protein [Populus trichocarpa]
gi|222863550|gb|EEF00681.1| chloroplast mutator family
protein [Populus trichocarpa]
Length = 1130
Score = 97.8 bits (242), Expect = 1e-18
Identities = 42/72 (58%), Positives = 57/72 (79%)
Frame = -1
Query: 216 IICQSKLIETYKKKSPSDLAEVKCHSVGAREQPPPSTVGTSNIYVLIRPDKTLYIGQTDD 37
+ICQ KLIE YK+K+ S++ C ++GAREQPPPST+ S +YV++RPDK LY+G TDD
Sbjct: 999 MICQKKLIELYKQKNTSEVVSFHCVAIGAREQPPPSTISASCVYVMLRPDKKLYVGVTDD 1058
Query: 36 LVGRLRTHRTKE 1
L R+R+HR+KE
Sbjct: 1059 LESRIRSHRSKE 1070