BLASTX nr result
ID: Zingiber24_contig00049341
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00049341
(326 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004490389.1| PREDICTED: RING-H2 finger protein ATL54-like... 62 6e-08
dbj|BAJ87700.1| predicted protein [Hordeum vulgare subsp. vulgare] 62 1e-07
gb|EEE57195.1| hypothetical protein OsJ_07142 [Oryza sativa Japo... 61 1e-07
gb|EEC73405.1| hypothetical protein OsI_07660 [Oryza sativa Indi... 61 1e-07
ref|NP_001047138.1| Os02g0557300 [Oryza sativa Japonica Group] g... 61 1e-07
gb|EXB88529.1| E3 ubiquitin-protein ligase ATL41 [Morus notabilis] 61 2e-07
ref|NP_181764.1| RING-H2 finger protein ATL40 [Arabidopsis thali... 61 2e-07
ref|XP_002454043.1| hypothetical protein SORBIDRAFT_04g023630 [S... 60 3e-07
ref|XP_002531110.1| conserved hypothetical protein [Ricinus comm... 60 4e-07
ref|XP_004509804.1| PREDICTED: RING-H2 finger protein ATL51-like... 59 5e-07
gb|EMT23411.1| Putative RING-H2 finger protein ATL2C [Aegilops t... 59 5e-07
ref|XP_003565490.1| PREDICTED: RING-H2 finger protein ATL5-like ... 59 5e-07
dbj|BAK02454.1| predicted protein [Hordeum vulgare subsp. vulgare] 59 5e-07
dbj|BAJ97967.1| predicted protein [Hordeum vulgare subsp. vulgare] 59 5e-07
ref|XP_002892211.1| hypothetical protein ARALYDRAFT_887598 [Arab... 59 5e-07
ref|NP_001149313.1| RING-H2 finger protein ATL2C [Zea mays] gi|1... 59 5e-07
gb|ABZ04799.1| At1g04360-like protein [Arabidopsis lyrata] 59 5e-07
gb|EOY34153.1| RING/U-box superfamily protein, putative [Theobro... 59 7e-07
ref|XP_006489746.1| PREDICTED: RING-H2 finger protein ATL16-like... 59 9e-07
ref|XP_006420199.1| hypothetical protein CICLE_v10005261mg [Citr... 59 9e-07
>ref|XP_004490389.1| PREDICTED: RING-H2 finger protein ATL54-like [Cicer arietinum]
Length = 368
Score = 62.4 bits (150), Expect = 6e-08
Identities = 30/78 (38%), Positives = 44/78 (56%)
Frame = -3
Query: 321 LPNCGHVFHVSCSDTWLRMNSTCPLCRTSVMYDAEESVSMMAQLERERPLGYRSGRSDET 142
LP C H FH+SC DTWLR ++ CPLCR S++ + S M+ LE+E GR+ ET
Sbjct: 165 LPKCSHAFHISCIDTWLRSHTNCPLCRASIVSNNVTSEVTMSNLEQE---NNNLGRNQET 221
Query: 141 THDPELGLEATTGNL*ID 88
+ + + N+ I+
Sbjct: 222 QMENPRNEDVLSNNIVIN 239
>dbj|BAJ87700.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 355
Score = 61.6 bits (148), Expect = 1e-07
Identities = 26/47 (55%), Positives = 32/47 (68%)
Frame = -3
Query: 321 LPNCGHVFHVSCSDTWLRMNSTCPLCRTSVMYDAEESVSMMAQLERE 181
LP CGH FHV+C DTWLR +STCPLCRT++ A +V+ A E
Sbjct: 158 LPLCGHAFHVACIDTWLRSSSTCPLCRTALSVRARSAVAAAADASGE 204
>gb|EEE57195.1| hypothetical protein OsJ_07142 [Oryza sativa Japonica Group]
Length = 176
Score = 61.2 bits (147), Expect = 1e-07
Identities = 30/77 (38%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Frame = -3
Query: 324 RLPNCGHVFHVSCSDTWLRMNSTCPLCRTSVMYDAE----ESVSMMAQLERER---PLGY 166
R+P CGH FH+ C D WL N+TCPLCR S++ + + V + AQ E + Y
Sbjct: 57 RIPPCGHTFHIDCIDHWLSTNTTCPLCRVSLLPSPKTASIDPVDLEAQTVEENSSLDVQY 116
Query: 165 RSGRSDETTHDPELGLE 115
+ GR DE T + L+
Sbjct: 117 QEGRIDENTRQEDQTLQ 133
>gb|EEC73405.1| hypothetical protein OsI_07660 [Oryza sativa Indica Group]
Length = 176
Score = 61.2 bits (147), Expect = 1e-07
Identities = 30/77 (38%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Frame = -3
Query: 324 RLPNCGHVFHVSCSDTWLRMNSTCPLCRTSVMYDAE----ESVSMMAQLERER---PLGY 166
R+P CGH FH+ C D WL N+TCPLCR S++ + + V + AQ E + Y
Sbjct: 57 RIPPCGHTFHIDCIDHWLSTNTTCPLCRVSLLPSPKTASIDPVDLEAQTVEENSSLDVQY 116
Query: 165 RSGRSDETTHDPELGLE 115
+ GR DE T + L+
Sbjct: 117 QEGRIDENTRQEDQTLQ 133
>ref|NP_001047138.1| Os02g0557300 [Oryza sativa Japonica Group]
gi|113536669|dbj|BAF09052.1| Os02g0557300 [Oryza sativa
Japonica Group] gi|215695052|dbj|BAG90243.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 233
Score = 61.2 bits (147), Expect = 1e-07
Identities = 30/77 (38%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Frame = -3
Query: 324 RLPNCGHVFHVSCSDTWLRMNSTCPLCRTSVMYDAE----ESVSMMAQLERER---PLGY 166
R+P CGH FH+ C D WL N+TCPLCR S++ + + V + AQ E + Y
Sbjct: 114 RIPPCGHTFHIDCIDHWLSTNTTCPLCRVSLLPSPKTASIDPVDLEAQTVEENSSLDVQY 173
Query: 165 RSGRSDETTHDPELGLE 115
+ GR DE T + L+
Sbjct: 174 QEGRIDENTRQEDQTLQ 190
>gb|EXB88529.1| E3 ubiquitin-protein ligase ATL41 [Morus notabilis]
Length = 247
Score = 60.8 bits (146), Expect = 2e-07
Identities = 34/82 (41%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Frame = -3
Query: 321 LPNCGHVFHVSCSDTWLRMNSTCPLCRTSVM-------YDAEESVSMMAQLERER--PLG 169
LPNCGHVFHV C D WL ++TCPLCR V YD E +AQL++ P+
Sbjct: 126 LPNCGHVFHVDCIDLWLGSHTTCPLCRAEVEPRVVVVDYDQPEQSGDLAQLQQPTAPPVD 185
Query: 168 YRSGRSDETTHDPELGLEATTG 103
S E PE+ +TG
Sbjct: 186 EMSLLHGEQLAQPEIKPSESTG 207
>ref|NP_181764.1| RING-H2 finger protein ATL40 [Arabidopsis thaliana]
gi|68565336|sp|Q9SLC4.1|ATL40_ARATH RecName:
Full=RING-H2 finger protein ATL40
gi|4567307|gb|AAD23718.1| putative RING zinc finger
protein [Arabidopsis thaliana]
gi|38566660|gb|AAR24220.1| At2g42350 [Arabidopsis
thaliana] gi|40824201|gb|AAR92359.1| At2g42350
[Arabidopsis thaliana] gi|330255016|gb|AEC10110.1|
RING-H2 finger protein [Arabidopsis thaliana]
Length = 217
Score = 60.8 bits (146), Expect = 2e-07
Identities = 29/51 (56%), Positives = 33/51 (64%)
Frame = -3
Query: 321 LPNCGHVFHVSCSDTWLRMNSTCPLCRTSVMYDAEESVSMMAQLERERPLG 169
LPNC HVFHVSC DTWL STCP+CRT +AE S + RE P+G
Sbjct: 116 LPNCKHVFHVSCVDTWLTTQSTCPVCRT----EAEPSHPRLEPEPREGPVG 162
>ref|XP_002454043.1| hypothetical protein SORBIDRAFT_04g023630 [Sorghum bicolor]
gi|241933874|gb|EES07019.1| hypothetical protein
SORBIDRAFT_04g023630 [Sorghum bicolor]
Length = 363
Score = 60.1 bits (144), Expect = 3e-07
Identities = 25/51 (49%), Positives = 30/51 (58%)
Frame = -3
Query: 321 LPNCGHVFHVSCSDTWLRMNSTCPLCRTSVMYDAEESVSMMAQLERERPLG 169
LP C H FHV C DTWLR + +CPLCR VM D + + A + E P G
Sbjct: 168 LPKCAHAFHVQCIDTWLRAHVSCPLCRADVMVDHAAAAAAAAGADAEHPPG 218
>ref|XP_002531110.1| conserved hypothetical protein [Ricinus communis]
gi|223529306|gb|EEF31275.1| conserved hypothetical
protein [Ricinus communis]
Length = 199
Score = 59.7 bits (143), Expect = 4e-07
Identities = 26/49 (53%), Positives = 31/49 (63%)
Frame = -3
Query: 321 LPNCGHVFHVSCSDTWLRMNSTCPLCRTSVMYDAEESVSMMAQLERERP 175
LPNC HVFHV+C DTW + +S CPLCR+ V YD SM + E P
Sbjct: 108 LPNCAHVFHVACIDTWFQTHSNCPLCRSHV-YDLSHEYSMSINILLETP 155
>ref|XP_004509804.1| PREDICTED: RING-H2 finger protein ATL51-like [Cicer arietinum]
Length = 345
Score = 59.3 bits (142), Expect = 5e-07
Identities = 27/59 (45%), Positives = 35/59 (59%)
Frame = -3
Query: 321 LPNCGHVFHVSCSDTWLRMNSTCPLCRTSVMYDAEESVSMMAQLERERPLGYRSGRSDE 145
LPNC HVFHVSC D WL+ NS+CPLCR+++ S + + E PL + DE
Sbjct: 157 LPNCNHVFHVSCIDKWLKSNSSCPLCRSNIFTLNNVSTFEVQDVVIELPLRNETFSQDE 215
>gb|EMT23411.1| Putative RING-H2 finger protein ATL2C [Aegilops tauschii]
Length = 295
Score = 59.3 bits (142), Expect = 5e-07
Identities = 34/87 (39%), Positives = 43/87 (49%), Gaps = 7/87 (8%)
Frame = -3
Query: 321 LPNCGHVFHVSCSDTWLRMNSTCPLCRTSVMYDAEESVSMMAQLERE-------RPLGYR 163
LP CGH FHV C D WL +STCPLCR SV+ + S ++ LE + LG R
Sbjct: 8 LPTCGHAFHVPCIDAWLLSHSTCPLCRGSVLDLSPASSPVVLVLESDGRADTAAEALGGR 67
Query: 162 SGRSDETTHDPELGLEATTGNL*IDDG 82
+E + E +E G L DG
Sbjct: 68 DDHENEASPKAEEVVEVKLGKLRCMDG 94
>ref|XP_003565490.1| PREDICTED: RING-H2 finger protein ATL5-like [Brachypodium
distachyon]
Length = 210
Score = 59.3 bits (142), Expect = 5e-07
Identities = 30/73 (41%), Positives = 34/73 (46%)
Frame = -3
Query: 321 LPNCGHVFHVSCSDTWLRMNSTCPLCRTSVMYDAEESVSMMAQLERERPLGYRSGRSDET 142
LPNCGHVFHV C D WLR +TCPLCR AE + + E S S
Sbjct: 131 LPNCGHVFHVECVDAWLRSRTTCPLCRAG----AEPETELKGNGKEEAAQSSSSSSSAAA 186
Query: 141 THDPELGLEATTG 103
T P+ L G
Sbjct: 187 TGPPQPALSGPGG 199
>dbj|BAK02454.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 211
Score = 59.3 bits (142), Expect = 5e-07
Identities = 27/59 (45%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Frame = -3
Query: 321 LPNCGHVFHVSCSDTWLRMNSTCPLCRTSVMYDAE----ESVSMMAQLERERPLGYRSG 157
LPNCGH+FH+ C D WLR +TCPLCR + +S S +A E PLG G
Sbjct: 126 LPNCGHLFHLECVDAWLRTRTTCPLCRAGAEVPGDDEKAQSSSAVAATEPAAPLGAAGG 184
>dbj|BAJ97967.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 211
Score = 59.3 bits (142), Expect = 5e-07
Identities = 27/59 (45%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Frame = -3
Query: 321 LPNCGHVFHVSCSDTWLRMNSTCPLCRTSVMYDAE----ESVSMMAQLERERPLGYRSG 157
LPNCGH+FH+ C D WLR +TCPLCR + +S S +A E PLG G
Sbjct: 126 LPNCGHLFHLECVDAWLRTRTTCPLCRAGAEVPGDDEKAQSSSAVAATEPAAPLGAAGG 184
>ref|XP_002892211.1| hypothetical protein ARALYDRAFT_887598 [Arabidopsis lyrata subsp.
lyrata] gi|297338053|gb|EFH68470.1| hypothetical protein
ARALYDRAFT_887598 [Arabidopsis lyrata subsp. lyrata]
Length = 382
Score = 59.3 bits (142), Expect = 5e-07
Identities = 23/42 (54%), Positives = 31/42 (73%)
Frame = -3
Query: 321 LPNCGHVFHVSCSDTWLRMNSTCPLCRTSVMYDAEESVSMMA 196
+PNC HVFH+ C D WL+ N+ CPLCRTSV DA S+ +++
Sbjct: 150 IPNCCHVFHIDCIDIWLQGNANCPLCRTSVSCDASFSLDLIS 191
>ref|NP_001149313.1| RING-H2 finger protein ATL2C [Zea mays] gi|195624254|gb|ACG33957.1|
RING-H2 finger protein ATL2C [Zea mays]
Length = 433
Score = 59.3 bits (142), Expect = 5e-07
Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = -3
Query: 321 LPNCGHVFHVSCSDTWLRMNSTCPLCRTSVMYDAEESVS-MMAQLERERPLGYRSGRSDE 145
LP C H FH+ C DTWL +STCPLCR S++ D + S ++ LE E + +
Sbjct: 135 LPKCSHAFHLECIDTWLLSHSTCPLCRRSLLADLSPTCSPVVMVLESESARDMAASAARA 194
Query: 144 TTHDPELGLEAT 109
T +P G AT
Sbjct: 195 TDAEPSAGAGAT 206
>gb|ABZ04799.1| At1g04360-like protein [Arabidopsis lyrata]
Length = 361
Score = 59.3 bits (142), Expect = 5e-07
Identities = 23/42 (54%), Positives = 31/42 (73%)
Frame = -3
Query: 321 LPNCGHVFHVSCSDTWLRMNSTCPLCRTSVMYDAEESVSMMA 196
+PNC HVFH+ C D WL+ N+ CPLCRTSV DA S+ +++
Sbjct: 138 IPNCCHVFHIDCIDIWLQGNANCPLCRTSVSCDASFSLDLIS 179
>gb|EOY34153.1| RING/U-box superfamily protein, putative [Theobroma cacao]
Length = 210
Score = 58.9 bits (141), Expect = 7e-07
Identities = 34/86 (39%), Positives = 45/86 (52%), Gaps = 13/86 (15%)
Frame = -3
Query: 321 LPNCGHVFHVSCSDTWLRMNSTCPLCRTSVMY-----DAEESVSMMAQLE--------RE 181
LPNC H FH+SC DTW + +S+CPLCR+SV + S+SM LE ++
Sbjct: 125 LPNCTHAFHISCIDTWFQSHSSCPLCRSSVSELPIRPECSVSISMFTMLETLRREDFSQD 184
Query: 180 RPLGYRSGRSDETTHDPELGLEATTG 103
R Y+ RS+ H L E T G
Sbjct: 185 RAAHYQMLRSEVLRHS-ALRYEPTGG 209
>ref|XP_006489746.1| PREDICTED: RING-H2 finger protein ATL16-like [Citrus sinensis]
Length = 358
Score = 58.5 bits (140), Expect = 9e-07
Identities = 20/30 (66%), Positives = 25/30 (83%)
Frame = -3
Query: 321 LPNCGHVFHVSCSDTWLRMNSTCPLCRTSV 232
+PNCGHVFH+ C D WL+ N+ CPLCRTS+
Sbjct: 147 IPNCGHVFHIDCIDVWLQSNANCPLCRTSI 176
>ref|XP_006420199.1| hypothetical protein CICLE_v10005261mg [Citrus clementina]
gi|557522072|gb|ESR33439.1| hypothetical protein
CICLE_v10005261mg [Citrus clementina]
Length = 358
Score = 58.5 bits (140), Expect = 9e-07
Identities = 20/30 (66%), Positives = 25/30 (83%)
Frame = -3
Query: 321 LPNCGHVFHVSCSDTWLRMNSTCPLCRTSV 232
+PNCGHVFH+ C D WL+ N+ CPLCRTS+
Sbjct: 147 IPNCGHVFHIDCIDVWLQSNANCPLCRTSI 176