BLASTX nr result

ID: Zingiber24_contig00049337 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00049337
         (290 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307949.2| hypothetical protein POPTR_0006s03040g [Popu...    60   4e-07
gb|EMJ05505.1| hypothetical protein PRUPE_ppa000164mg [Prunus pe...    60   4e-07
ref|XP_004171804.1| PREDICTED: transcription elongation factor S...    59   7e-07
ref|XP_004152869.1| PREDICTED: transcription elongation factor S...    59   7e-07
ref|XP_002322597.2| hypothetical protein POPTR_0016s02900g [Popu...    58   1e-06
ref|XP_004309652.1| PREDICTED: transcription elongation factor S...    55   7e-06

>ref|XP_002307949.2| hypothetical protein POPTR_0006s03040g [Populus trichocarpa]
           gi|550335341|gb|EEE91472.2| hypothetical protein
           POPTR_0006s03040g [Populus trichocarpa]
          Length = 1487

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 45/91 (49%), Positives = 53/91 (58%), Gaps = 10/91 (10%)
 Frame = -3

Query: 243 QGGRSAEEKLKISLXXXXXXXXXXXG-------QLEDRNVIGDEDEMAHFIVDEDVDDAG 85
           +GGR+AEEKLK SL                   ++E+   IGDEDEMA FIVDED DD G
Sbjct: 141 KGGRTAEEKLKRSLFGDDEGVPLEDMPEEEEQEEVEEDADIGDEDEMADFIVDED-DDDG 199

Query: 84  ALVR--KLTKEKSHQVLCIASSTSQ-ALEIF 1
            LVR  KL K+KS Q   ++SS  Q A EIF
Sbjct: 200 TLVRRKKLKKKKSQQASGVSSSALQEAQEIF 230


>gb|EMJ05505.1| hypothetical protein PRUPE_ppa000164mg [Prunus persica]
          Length = 1553

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 43/103 (41%), Positives = 58/103 (56%), Gaps = 10/103 (9%)
 Frame = -3

Query: 279 LEDQQKAIGWHSQGGRSAEEKLKISLXXXXXXXXXXXG-------QLEDRNVIGDEDEMA 121
           L D+++ +G   + GR+AEEKLK +L                   + ED   +G+EDEMA
Sbjct: 51  LSDEEEFVG-SGKSGRTAEEKLKRTLFGDDEGPPLEDIAEEEEPAEAEDDGEVGEEDEMA 109

Query: 120 HFIVDEDVDDAGALV--RKLTKEKSHQVLCIASSTSQ-ALEIF 1
            FIVDE+ D+ GA V  RKL K+KS Q   ++SS  Q A EIF
Sbjct: 110 DFIVDEEFDETGAPVRQRKLKKKKSRQAPGVSSSALQEAHEIF 152


>ref|XP_004171804.1| PREDICTED: transcription elongation factor SPT6-like, partial
           [Cucumis sativus]
          Length = 1322

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 9/91 (9%)
 Frame = -3

Query: 246 SQGGRSAEEKLKISLXXXXXXXXXXXGQLEDRNV------IGDEDEMAHFIVDEDVDDAG 85
           S+GGR+AEEKLK SL            + E++        IGDEDEMA FIVDE+ D+ G
Sbjct: 131 SRGGRTAEEKLKRSLFGDDEAPLEDIAEEEEQPEEEEDADIGDEDEMADFIVDEEEDEDG 190

Query: 84  ALVR--KLTKEKSHQVLCIASSTSQ-ALEIF 1
           A +R  KL K+KS Q   ++S+  Q A EIF
Sbjct: 191 APIRRKKLKKKKSRQAPGVSSTALQEAHEIF 221


>ref|XP_004152869.1| PREDICTED: transcription elongation factor SPT6-like [Cucumis
           sativus]
          Length = 1631

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 9/91 (9%)
 Frame = -3

Query: 246 SQGGRSAEEKLKISLXXXXXXXXXXXGQLEDRNV------IGDEDEMAHFIVDEDVDDAG 85
           S+GGR+AEEKLK SL            + E++        IGDEDEMA FIVDE+ D+ G
Sbjct: 131 SRGGRTAEEKLKRSLFGDDEAPLEDIAEEEEQPEEEEDADIGDEDEMADFIVDEEEDEDG 190

Query: 84  ALVR--KLTKEKSHQVLCIASSTSQ-ALEIF 1
           A +R  KL K+KS Q   ++S+  Q A EIF
Sbjct: 191 APIRRKKLKKKKSRQAPGVSSTALQEAHEIF 221


>ref|XP_002322597.2| hypothetical protein POPTR_0016s02900g [Populus trichocarpa]
           gi|550320692|gb|EEF04358.2| hypothetical protein
           POPTR_0016s02900g [Populus trichocarpa]
          Length = 1692

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 47/106 (44%), Positives = 57/106 (53%), Gaps = 10/106 (9%)
 Frame = -3

Query: 288 DNELEDQQKAIGWHSQGGRSAEEKLKISLXXXXXXXXXXXG-------QLEDRNVIGDED 130
           D +L D +       +GGR+AEEKLK SL                   ++E+   IGDED
Sbjct: 127 DEDLSDDE--FDGSGKGGRTAEEKLKRSLFGDDEGVPLEDMPEEEEQEEVEEDADIGDED 184

Query: 129 EMAHFIVDEDVDDAGALVR--KLTKEKSHQVLCIASSTSQ-ALEIF 1
           EMA FIVDED D+ G LVR  KL K+KS Q    +SS  Q A EIF
Sbjct: 185 EMADFIVDED-DEDGTLVRRKKLKKKKSRQASGASSSALQEAQEIF 229


>ref|XP_004309652.1| PREDICTED: transcription elongation factor SPT6-like [Fragaria
           vesca subsp. vesca]
          Length = 1620

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 42/99 (42%), Positives = 55/99 (55%), Gaps = 6/99 (6%)
 Frame = -3

Query: 279 LEDQQKAIGWHSQGGRSAEEKLKISLXXXXXXXXXXXGQLEDRNVIGD---EDEMAHFIV 109
           L D+++  G   +GGR+AEEKLK SL              E+     +   EDEMA FIV
Sbjct: 127 LSDEEEFHGT-GKGGRTAEEKLKFSLFGDEEGPPLEDIAEEEEPAEAEDDGEDEMADFIV 185

Query: 108 DEDVDDAGALVR--KLTKEKSHQVLCIASSTSQ-ALEIF 1
           DE+ D+AG  VR  KL K+KS Q   ++SS  Q A +IF
Sbjct: 186 DEEFDEAGVPVRQKKLKKKKSRQAAGVSSSALQEAHDIF 224


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