BLASTX nr result

ID: Zingiber24_contig00049266 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00049266
         (252 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMS56680.1| MutS protein-like protein 5 [Triticum urartu]           64   3e-08
gb|AEL30371.1| TIR-NBS-LRR type disease resistance protein [Arac...    63   5e-08
emb|CCH50976.1| T4.15 [Malus x robusta]                                60   3e-07
gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptas...    57   3e-06

>gb|EMS56680.1| MutS protein-like protein 5 [Triticum urartu]
          Length = 1140

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 32/83 (38%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
 Frame = +1

Query: 10  KESWW*NEKVQKKMKEK*TAYKELYIYKN--DLXXXXXXXXXXXXXXXXXXXXTFERLYQ 183
           K++WW N+ VQK +KEK   ++ LY+ ++  ++                     +E LYQ
Sbjct: 412 KDTWWWNDDVQKAIKEKKDCFRRLYLDRSADNIEKYKMAKKAAKRAMSEARGRAYEDLYQ 471

Query: 184 KLDTKEGERDIYRIAKVRERKTR 252
           +LDTKE ERDIY++AK+R RK R
Sbjct: 472 RLDTKEDERDIYKMAKIRVRKAR 494


>gb|AEL30371.1| TIR-NBS-LRR type disease resistance protein [Arachis hypogaea]
          Length = 1939

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 35/84 (41%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
 Frame = +1

Query: 7    NKESWW*NEKVQKKMKEK*TAYKELYIYKN--DLXXXXXXXXXXXXXXXXXXXXTFERLY 180
            +KESWW N  +Q+K+K K   +KE  + +N  +                      +E LY
Sbjct: 814  DKESWWWNASIQEKIKIKRECFKEWSLCRNVDNWEKYKAAKKETKVAVSEARTRAYEGLY 873

Query: 181  QKLDTKEGERDIYRIAKVRERKTR 252
            Q LDTKEGE+ IYRIAK RER+TR
Sbjct: 874  QSLDTKEGEKGIYRIAKSRERRTR 897


>emb|CCH50976.1| T4.15 [Malus x robusta]
          Length = 986

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 33/83 (39%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
 Frame = +1

Query: 10  KESWW*NEKVQKKMKEK*TAYKELYIYKNDLXXXXXXXXXXXXXXXXXXXX--TFERLYQ 183
           KESWW NE+VQ K+K K    K LY  + D                        ++ +Y+
Sbjct: 416 KESWWWNEEVQTKVKAKKECCKALYKDRTDENGERYRKAKQEAKKAVREAKLAAYDDMYK 475

Query: 184 KLDTKEGERDIYRIAKVRERKTR 252
           +LDTKEGE DIY++A+ RE+KTR
Sbjct: 476 RLDTKEGELDIYKLARAREKKTR 498


>gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 517

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 34/83 (40%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
 Frame = +1

Query: 10  KESWW*NEKVQKKMKEK*TAYKELYIYKNDLXXXXXXXXXXXXXXXXXXXXT--FERLYQ 183
           KESWW N+ VQ K++ K   +K+    KN                      T  FE LYQ
Sbjct: 28  KESWWWNDNVQSKVRIKRDCFKDWSRCKNVETWDKYKIARKEAKKVVSEARTQAFEGLYQ 87

Query: 184 KLDTKEGERDIYRIAKVRERKTR 252
            L TKEGE+ IY+++K RERKTR
Sbjct: 88  SLGTKEGEKSIYKLSKGRERKTR 110


Top