BLASTX nr result
ID: Zingiber24_contig00049248
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00049248
(252 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003561889.1| PREDICTED: replication protein A 70 kDa DNA-... 95 1e-17
gb|EMS53693.1| Replication protein A 70 kDa DNA-binding subunit ... 91 1e-16
emb|CBI15109.3| unnamed protein product [Vitis vinifera] 88 1e-15
ref|XP_002283959.1| PREDICTED: replication protein A 70 kDa DNA-... 88 1e-15
emb|CAN71402.1| hypothetical protein VITISV_006284 [Vitis vinifera] 88 1e-15
ref|XP_006345121.1| PREDICTED: replication protein A 70 kDa DNA-... 85 9e-15
ref|XP_004236053.1| PREDICTED: replication protein A 70 kDa DNA-... 84 1e-14
ref|XP_006280119.1| hypothetical protein CARUB_v10026014mg, part... 82 6e-14
ref|XP_004138198.1| PREDICTED: replication protein A 70 kDa DNA-... 81 1e-13
dbj|BAF64713.1| 70 kDa subunit of replication protein A [Ipomoea... 81 2e-13
ref|XP_004508670.1| PREDICTED: replication protein A 70 kDa DNA-... 80 3e-13
ref|XP_006649629.1| PREDICTED: replication protein A 70 kDa DNA-... 79 8e-13
gb|ESW27226.1| hypothetical protein PHAVU_003G184400g [Phaseolus... 77 2e-12
ref|XP_006440765.1| hypothetical protein CICLE_v10019317mg [Citr... 77 2e-12
ref|XP_002871302.1| hypothetical protein ARALYDRAFT_325405 [Arab... 76 4e-12
ref|XP_006477677.1| PREDICTED: replication protein A 70 kDa DNA-... 75 7e-12
gb|AAB71836.1| replication protein A1 [Oryza sativa Indica Group... 75 7e-12
dbj|BAC77529.1| replication protein A 70b [Oryza sativa Japonica... 75 7e-12
ref|NP_001049369.1| Os03g0214100 [Oryza sativa Japonica Group] g... 75 7e-12
ref|XP_006399289.1| hypothetical protein EUTSA_v10013014mg [Eutr... 75 9e-12
>ref|XP_003561889.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Brachypodium distachyon]
Length = 635
Score = 94.7 bits (234), Expect = 1e-17
Identities = 43/70 (61%), Positives = 59/70 (84%)
Frame = +2
Query: 38 ARSVTSGAISMLLSNPSPDSPTDLPEIIVQVVDLKPIGSSSTRFTFKASDGEMKLKGMLP 217
A+SVT A++++L+N SP+SP D+PEI+VQVVDLKP+GS+ TRFTF ASDG+ K+K MLP
Sbjct: 3 AKSVTPDALAIILANRSPESPEDVPEIVVQVVDLKPLGSTGTRFTFMASDGKAKMKAMLP 62
Query: 218 TYLSTEIQSG 247
T ++E+ SG
Sbjct: 63 TNFASEVNSG 72
>gb|EMS53693.1| Replication protein A 70 kDa DNA-binding subunit [Triticum urartu]
Length = 592
Score = 91.3 bits (225), Expect = 1e-16
Identities = 43/71 (60%), Positives = 59/71 (83%)
Frame = +2
Query: 38 ARSVTSGAISMLLSNPSPDSPTDLPEIIVQVVDLKPIGSSSTRFTFKASDGEMKLKGMLP 217
A+SVT A++++LSNP+P+SP D+PEI+VQV+DLKPIGS RFTF ASDGE K+K +L
Sbjct: 3 AKSVTPSAVALILSNPTPESPDDVPEIVVQVLDLKPIGS---RFTFMASDGEAKVKAILS 59
Query: 218 TYLSTEIQSGK 250
T+ ++E+ SGK
Sbjct: 60 THFASEVHSGK 70
>emb|CBI15109.3| unnamed protein product [Vitis vinifera]
Length = 602
Score = 87.8 bits (216), Expect = 1e-15
Identities = 44/71 (61%), Positives = 55/71 (77%)
Frame = +2
Query: 35 MARSVTSGAISMLLSNPSPDSPTDLPEIIVQVVDLKPIGSSSTRFTFKASDGEMKLKGML 214
MA+S+T IS +LSNPSPDS T+LPEIIVQV+DL PIG+ R+ F A+DG+MKLK M
Sbjct: 1 MAKSITPNGISTILSNPSPDSSTELPEIIVQVIDLTPIGN---RYKFTANDGKMKLKAMF 57
Query: 215 PTYLSTEIQSG 247
P+ S+EI SG
Sbjct: 58 PSSFSSEINSG 68
>ref|XP_002283959.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit isoform
1 [Vitis vinifera]
Length = 625
Score = 87.8 bits (216), Expect = 1e-15
Identities = 44/71 (61%), Positives = 55/71 (77%)
Frame = +2
Query: 35 MARSVTSGAISMLLSNPSPDSPTDLPEIIVQVVDLKPIGSSSTRFTFKASDGEMKLKGML 214
MA+S+T IS +LSNPSPDS T+LPEIIVQV+DL PIG+ R+ F A+DG+MKLK M
Sbjct: 1 MAKSITPNGISTILSNPSPDSSTELPEIIVQVIDLTPIGN---RYKFTANDGKMKLKAMF 57
Query: 215 PTYLSTEIQSG 247
P+ S+EI SG
Sbjct: 58 PSSFSSEINSG 68
>emb|CAN71402.1| hypothetical protein VITISV_006284 [Vitis vinifera]
Length = 634
Score = 87.8 bits (216), Expect = 1e-15
Identities = 44/71 (61%), Positives = 55/71 (77%)
Frame = +2
Query: 35 MARSVTSGAISMLLSNPSPDSPTDLPEIIVQVVDLKPIGSSSTRFTFKASDGEMKLKGML 214
MA+S+T IS +LSNPSPDS T+LPEIIVQV+DL PIG+ R+ F A+DG+MKLK M
Sbjct: 1 MAKSITPNGISTILSNPSPDSSTELPEIIVQVIDLTPIGN---RYKFTANDGKMKLKAMF 57
Query: 215 PTYLSTEIQSG 247
P+ S+EI SG
Sbjct: 58 PSSFSSEINSG 68
>ref|XP_006345121.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit B-like
[Solanum tuberosum]
Length = 614
Score = 85.1 bits (209), Expect = 9e-15
Identities = 43/71 (60%), Positives = 58/71 (81%)
Frame = +2
Query: 35 MARSVTSGAISMLLSNPSPDSPTDLPEIIVQVVDLKPIGSSSTRFTFKASDGEMKLKGML 214
MA++V+ AIS +L+NPSPDS +DLPEIIVQVVDLKP G+ R+ F A+DG+MK+KG+L
Sbjct: 1 MAKTVSPDAISTILANPSPDSSSDLPEIIVQVVDLKPTGN---RYMFSANDGKMKIKGIL 57
Query: 215 PTYLSTEIQSG 247
+ LS+E+ SG
Sbjct: 58 QSSLSSEVISG 68
>ref|XP_004236053.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Solanum lycopersicum]
Length = 614
Score = 84.3 bits (207), Expect = 1e-14
Identities = 43/71 (60%), Positives = 57/71 (80%)
Frame = +2
Query: 35 MARSVTSGAISMLLSNPSPDSPTDLPEIIVQVVDLKPIGSSSTRFTFKASDGEMKLKGML 214
MA+ V+ AIS +L+NPSPDS +DLPEIIVQVVDLKP G+ R+ F A+DG+MK+KG+L
Sbjct: 1 MAKMVSPDAISTILANPSPDSSSDLPEIIVQVVDLKPTGN---RYMFSANDGKMKIKGIL 57
Query: 215 PTYLSTEIQSG 247
+ LS+E+ SG
Sbjct: 58 QSSLSSEVISG 68
>ref|XP_006280119.1| hypothetical protein CARUB_v10026014mg, partial [Capsella rubella]
gi|482548823|gb|EOA13017.1| hypothetical protein
CARUB_v10026014mg, partial [Capsella rubella]
Length = 680
Score = 82.4 bits (202), Expect = 6e-14
Identities = 45/72 (62%), Positives = 54/72 (75%)
Frame = +2
Query: 35 MARSVTSGAISMLLSNPSPDSPTDLPEIIVQVVDLKPIGSSSTRFTFKASDGEMKLKGML 214
M SVT+GAIS +LSNPS DS +D PEI+VQVVDLKPIG+ R+TF A+DG+ KLK M
Sbjct: 50 MQTSVTAGAISTVLSNPSFDSSSDRPEIVVQVVDLKPIGN---RYTFSANDGKTKLKAMF 106
Query: 215 PTYLSTEIQSGK 250
L+ EI SGK
Sbjct: 107 TASLTPEIISGK 118
>ref|XP_004138198.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Cucumis sativus]
Length = 603
Score = 81.3 bits (199), Expect = 1e-13
Identities = 39/71 (54%), Positives = 56/71 (78%)
Frame = +2
Query: 35 MARSVTSGAISMLLSNPSPDSPTDLPEIIVQVVDLKPIGSSSTRFTFKASDGEMKLKGML 214
MA + T+G IS +LSNPSPDSP+D+P+++VQV+DLK G+ R+ F ASDG MKLK +L
Sbjct: 1 MASAPTAGGISKVLSNPSPDSPSDVPDVVVQVIDLKATGN---RYMFTASDGVMKLKAIL 57
Query: 215 PTYLSTEIQSG 247
P+ L++++ SG
Sbjct: 58 PSNLTSDVISG 68
>dbj|BAF64713.1| 70 kDa subunit of replication protein A [Ipomoea nil]
Length = 604
Score = 80.9 bits (198), Expect = 2e-13
Identities = 43/71 (60%), Positives = 55/71 (77%)
Frame = +2
Query: 35 MARSVTSGAISMLLSNPSPDSPTDLPEIIVQVVDLKPIGSSSTRFTFKASDGEMKLKGML 214
M RSVT AIS +L+NPSPDS +DLPE+IVQVVDLK G+ R+ F A+DG+MKLK +L
Sbjct: 1 MERSVTPDAISAILANPSPDSGSDLPELIVQVVDLKQAGN---RYMFTANDGKMKLKAIL 57
Query: 215 PTYLSTEIQSG 247
+ LS+E+ SG
Sbjct: 58 QSSLSSEVISG 68
>ref|XP_004508670.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Cicer arietinum]
Length = 617
Score = 80.1 bits (196), Expect = 3e-13
Identities = 41/72 (56%), Positives = 54/72 (75%)
Frame = +2
Query: 35 MARSVTSGAISMLLSNPSPDSPTDLPEIIVQVVDLKPIGSSSTRFTFKASDGEMKLKGML 214
MA+SV+ AIS LLSNPSPDS +DLP+I+VQV+DLK S R+ F A+DG MKL+ +L
Sbjct: 1 MAKSVSPNAISTLLSNPSPDSSSDLPDIVVQVLDLK---QSGNRYMFSANDGNMKLRAIL 57
Query: 215 PTYLSTEIQSGK 250
P+ +E+ SGK
Sbjct: 58 PSNQYSEVLSGK 69
>ref|XP_006649629.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit B-like
[Oryza brachyantha]
Length = 632
Score = 78.6 bits (192), Expect = 8e-13
Identities = 42/70 (60%), Positives = 52/70 (74%)
Frame = +2
Query: 38 ARSVTSGAISMLLSNPSPDSPTDLPEIIVQVVDLKPIGSSSTRFTFKASDGEMKLKGMLP 217
A SVT GA++ +L NPSP + D+P I++QVVDLKPIGS RFTF ASDGE K+K MLP
Sbjct: 6 APSVTRGAVAFILENPSP-AAADVPGIVLQVVDLKPIGS---RFTFMASDGEAKIKTMLP 61
Query: 218 TYLSTEIQSG 247
T E++SG
Sbjct: 62 TQFLPEVRSG 71
>gb|ESW27226.1| hypothetical protein PHAVU_003G184400g [Phaseolus vulgaris]
Length = 617
Score = 77.4 bits (189), Expect = 2e-12
Identities = 38/70 (54%), Positives = 54/70 (77%)
Frame = +2
Query: 38 ARSVTSGAISMLLSNPSPDSPTDLPEIIVQVVDLKPIGSSSTRFTFKASDGEMKLKGMLP 217
A+S+T A+S LL+NPSPDS +DL +I+VQVVDLKP G+ R+ F ASDG+ KL+ +LP
Sbjct: 3 AKSITPDAVSTLLANPSPDSSSDLSDIVVQVVDLKPSGN---RYMFSASDGKKKLRAILP 59
Query: 218 TYLSTEIQSG 247
+ + +E+ SG
Sbjct: 60 SNMYSEVLSG 69
>ref|XP_006440765.1| hypothetical protein CICLE_v10019317mg [Citrus clementina]
gi|557543027|gb|ESR54005.1| hypothetical protein
CICLE_v10019317mg [Citrus clementina]
Length = 623
Score = 77.0 bits (188), Expect = 2e-12
Identities = 39/71 (54%), Positives = 55/71 (77%)
Frame = +2
Query: 35 MARSVTSGAISMLLSNPSPDSPTDLPEIIVQVVDLKPIGSSSTRFTFKASDGEMKLKGML 214
M ++V+ AIS +LSNPSPDS +D+PEI+VQV+DLK G+ R+ F ASDG+ +LK +L
Sbjct: 1 MDKTVSPDAISTILSNPSPDSSSDIPEIVVQVLDLKLTGN---RYMFNASDGKKRLKAIL 57
Query: 215 PTYLSTEIQSG 247
P+ LS+E+ SG
Sbjct: 58 PSNLSSEVISG 68
>ref|XP_002871302.1| hypothetical protein ARALYDRAFT_325405 [Arabidopsis lyrata subsp.
lyrata] gi|297317139|gb|EFH47561.1| hypothetical protein
ARALYDRAFT_325405 [Arabidopsis lyrata subsp. lyrata]
Length = 604
Score = 76.3 bits (186), Expect = 4e-12
Identities = 41/72 (56%), Positives = 51/72 (70%)
Frame = +2
Query: 35 MARSVTSGAISMLLSNPSPDSPTDLPEIIVQVVDLKPIGSSSTRFTFKASDGEMKLKGML 214
M SVT I+ +LSN S DS + PEI+VQVVDLKP+G+ R+TF A+DG MK+K ML
Sbjct: 1 MENSVTQDGIATVLSNQSLDSSSVRPEIVVQVVDLKPVGN---RYTFNANDGNMKMKAML 57
Query: 215 PTYLSTEIQSGK 250
P L+ EI SGK
Sbjct: 58 PATLTCEIISGK 69
>ref|XP_006477677.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit B-like
[Citrus sinensis]
Length = 623
Score = 75.5 bits (184), Expect = 7e-12
Identities = 38/71 (53%), Positives = 55/71 (77%)
Frame = +2
Query: 35 MARSVTSGAISMLLSNPSPDSPTDLPEIIVQVVDLKPIGSSSTRFTFKASDGEMKLKGML 214
M ++V+ AIS +LSNPSP+S +D+PEI+VQV+DLK G+ R+ F ASDG+ +LK +L
Sbjct: 1 MDKTVSPDAISTILSNPSPESSSDIPEIVVQVLDLKLTGN---RYMFNASDGKKRLKAIL 57
Query: 215 PTYLSTEIQSG 247
P+ LS+E+ SG
Sbjct: 58 PSNLSSEVISG 68
>gb|AAB71836.1| replication protein A1 [Oryza sativa Indica Group]
gi|125542895|gb|EAY89034.1| hypothetical protein
OsI_10518 [Oryza sativa Indica Group]
Length = 630
Score = 75.5 bits (184), Expect = 7e-12
Identities = 42/72 (58%), Positives = 54/72 (75%), Gaps = 2/72 (2%)
Frame = +2
Query: 38 ARSVTSGAISMLLSNPSPDSPTDLP--EIIVQVVDLKPIGSSSTRFTFKASDGEMKLKGM 211
A SVT GA++ +L N SPD+ T +P EI++QVVDLKPIG TRFTF ASDG+ K+K M
Sbjct: 6 APSVTPGAVAFVLENASPDAATGVPVPEIVLQVVDLKPIG---TRFTFLASDGKDKIKTM 62
Query: 212 LPTYLSTEIQSG 247
L T L+ E++SG
Sbjct: 63 LLTQLAPEVRSG 74
>dbj|BAC77529.1| replication protein A 70b [Oryza sativa Japonica Group]
Length = 630
Score = 75.5 bits (184), Expect = 7e-12
Identities = 42/72 (58%), Positives = 54/72 (75%), Gaps = 2/72 (2%)
Frame = +2
Query: 38 ARSVTSGAISMLLSNPSPDSPTDLP--EIIVQVVDLKPIGSSSTRFTFKASDGEMKLKGM 211
A SVT GA++ +L N SPD+ T +P EI++QVVDLKPIG TRFTF ASDG+ K+K M
Sbjct: 6 APSVTPGAVAFVLENASPDAATGVPVPEIVLQVVDLKPIG---TRFTFLASDGKDKIKTM 62
Query: 212 LPTYLSTEIQSG 247
L T L+ E++SG
Sbjct: 63 LLTQLAPEVRSG 74
>ref|NP_001049369.1| Os03g0214100 [Oryza sativa Japonica Group]
gi|122247374|sp|Q10Q08.1|RFA1B_ORYSJ RecName:
Full=Replication protein A 70 kDa DNA-binding subunit B;
Short=OsRPA70b; AltName: Full=Replication factor A
protein 1B; AltName: Full=Replication protein A 1B
gi|108706832|gb|ABF94627.1| replication factor-a protein
1 containing protein, expressed [Oryza sativa Japonica
Group] gi|113547840|dbj|BAF11283.1| Os03g0214100 [Oryza
sativa Japonica Group] gi|125585388|gb|EAZ26052.1|
hypothetical protein OsJ_09906 [Oryza sativa Japonica
Group]
Length = 630
Score = 75.5 bits (184), Expect = 7e-12
Identities = 42/72 (58%), Positives = 54/72 (75%), Gaps = 2/72 (2%)
Frame = +2
Query: 38 ARSVTSGAISMLLSNPSPDSPTDLP--EIIVQVVDLKPIGSSSTRFTFKASDGEMKLKGM 211
A SVT GA++ +L N SPD+ T +P EI++QVVDLKPIG TRFTF ASDG+ K+K M
Sbjct: 6 APSVTPGAVAFVLENASPDAATGVPVPEIVLQVVDLKPIG---TRFTFLASDGKDKIKTM 62
Query: 212 LPTYLSTEIQSG 247
L T L+ E++SG
Sbjct: 63 LLTQLAPEVRSG 74
>ref|XP_006399289.1| hypothetical protein EUTSA_v10013014mg [Eutrema salsugineum]
gi|557100379|gb|ESQ40742.1| hypothetical protein
EUTSA_v10013014mg [Eutrema salsugineum]
Length = 605
Score = 75.1 bits (183), Expect = 9e-12
Identities = 39/72 (54%), Positives = 51/72 (70%)
Frame = +2
Query: 35 MARSVTSGAISMLLSNPSPDSPTDLPEIIVQVVDLKPIGSSSTRFTFKASDGEMKLKGML 214
M SVT I+ +LSN S DS + PEI+VQVVDLKP+G+ R+TF A+DG+MK+K ML
Sbjct: 1 MENSVTQNGIATVLSNQSTDSSSVRPEIVVQVVDLKPVGN---RYTFNANDGKMKIKAML 57
Query: 215 PTYLSTEIQSGK 250
P ++I SGK
Sbjct: 58 PATFRSDIISGK 69