BLASTX nr result
ID: Zingiber24_contig00049238
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00049238
(451 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004972152.1| PREDICTED: pentatricopeptide repeat-containi... 125 4e-27
ref|XP_004307867.1| PREDICTED: pentatricopeptide repeat-containi... 125 4e-27
ref|XP_004162737.1| PREDICTED: pentatricopeptide repeat-containi... 124 1e-26
ref|XP_004135378.1| PREDICTED: pentatricopeptide repeat-containi... 124 1e-26
ref|XP_003567066.1| PREDICTED: pentatricopeptide repeat-containi... 124 1e-26
ref|XP_002280513.1| PREDICTED: pentatricopeptide repeat-containi... 121 8e-26
gb|AFK47126.1| unknown [Medicago truncatula] 120 1e-25
ref|XP_003630737.1| Pentatricopeptide repeat-containing protein ... 120 1e-25
gb|EMS66989.1| hypothetical protein TRIUR3_06859 [Triticum urartu] 119 4e-25
gb|ESW32292.1| hypothetical protein PHAVU_002G309900g [Phaseolus... 118 9e-25
ref|XP_006348098.1| PREDICTED: pentatricopeptide repeat-containi... 117 2e-24
ref|XP_004503475.1| PREDICTED: pentatricopeptide repeat-containi... 117 2e-24
ref|XP_006494311.1| PREDICTED: pentatricopeptide repeat-containi... 116 3e-24
ref|XP_006451265.1| hypothetical protein CICLE_v10008215mg [Citr... 116 3e-24
ref|XP_006390118.1| hypothetical protein EUTSA_v10018483mg [Eutr... 115 8e-24
ref|NP_177842.1| pentatricopeptide repeat-containing protein [Ar... 113 2e-23
ref|XP_002889127.1| pentatricopeptide repeat-containing protein ... 113 2e-23
ref|XP_006300895.1| hypothetical protein CARUB_v10021262mg [Caps... 112 5e-23
emb|CBI39775.3| unnamed protein product [Vitis vinifera] 112 5e-23
ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containi... 112 5e-23
>ref|XP_004972152.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g77170-like [Setaria italica]
Length = 437
Score = 125 bits (315), Expect = 4e-27
Identities = 56/79 (70%), Positives = 65/79 (82%)
Frame = -3
Query: 449 MPMEANSVVWGSLLGACEKHANVEVGEWAAKNLLDLEPWNDGVYVVLSNIYAEAKNWREV 270
MPME N V+WG+LLGACEKH NV VGEWAA+ L++ EPWNDGVYVVLSNIYA A W EV
Sbjct: 358 MPMEGNVVIWGTLLGACEKHGNVSVGEWAAERLVEAEPWNDGVYVVLSNIYAAAGMWGEV 417
Query: 269 ERIRKLMKDRRVAKAPGYS 213
ER+RK+M +R V K+PG S
Sbjct: 418 ERVRKIMSERNVVKSPGCS 436
>ref|XP_004307867.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g77170-like [Fragaria vesca subsp. vesca]
Length = 468
Score = 125 bits (315), Expect = 4e-27
Identities = 55/85 (64%), Positives = 68/85 (80%)
Frame = -3
Query: 449 MPMEANSVVWGSLLGACEKHANVEVGEWAAKNLLDLEPWNDGVYVVLSNIYAEAKNWREV 270
MPM+ANS VWG L+GACEKH NVE+GEW AK+L LEPWNDG +VVLSNIYA W+EV
Sbjct: 384 MPMKANSAVWGCLMGACEKHGNVEMGEWVAKHLQQLEPWNDGAFVVLSNIYASRGLWKEV 443
Query: 269 ERIRKLMKDRRVAKAPGYSSSST*D 195
ER+R++M R++AK PGYS + + D
Sbjct: 444 ERVRRIMHQRKLAKVPGYSLAGSAD 468
>ref|XP_004162737.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g77170-like [Cucumis sativus]
Length = 614
Score = 124 bits (312), Expect = 1e-26
Identities = 53/85 (62%), Positives = 69/85 (81%)
Frame = -3
Query: 449 MPMEANSVVWGSLLGACEKHANVEVGEWAAKNLLDLEPWNDGVYVVLSNIYAEAKNWREV 270
MPM+ANS++WG L+G CEKH NVE+GEWA K+L +LEPWNDGVYVVLSNIYA W+E
Sbjct: 530 MPMKANSIIWGCLIGGCEKHGNVEIGEWAGKHLQELEPWNDGVYVVLSNIYATNGMWKEA 589
Query: 269 ERIRKLMKDRRVAKAPGYSSSST*D 195
+++R +MK R++AK PGYS ++ D
Sbjct: 590 QKMRDVMKQRQLAKVPGYSLATRLD 614
>ref|XP_004135378.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g77170-like [Cucumis sativus]
Length = 609
Score = 124 bits (312), Expect = 1e-26
Identities = 53/85 (62%), Positives = 69/85 (81%)
Frame = -3
Query: 449 MPMEANSVVWGSLLGACEKHANVEVGEWAAKNLLDLEPWNDGVYVVLSNIYAEAKNWREV 270
MPM+ANS++WG L+G CEKH NVE+GEWA K+L +LEPWNDGVYVVLSNIYA W+E
Sbjct: 525 MPMKANSIIWGCLIGGCEKHGNVEIGEWAGKHLQELEPWNDGVYVVLSNIYATNGMWKEA 584
Query: 269 ERIRKLMKDRRVAKAPGYSSSST*D 195
+++R +MK R++AK PGYS ++ D
Sbjct: 585 QKMRDVMKQRQLAKVPGYSLATRLD 609
>ref|XP_003567066.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g77170-like [Brachypodium distachyon]
Length = 433
Score = 124 bits (311), Expect = 1e-26
Identities = 56/79 (70%), Positives = 64/79 (81%)
Frame = -3
Query: 449 MPMEANSVVWGSLLGACEKHANVEVGEWAAKNLLDLEPWNDGVYVVLSNIYAEAKNWREV 270
MPMEAN V+WG+LLGACEKH NV VGEWAA+ L + EPWNDGVYVVLSN+YA A W EV
Sbjct: 354 MPMEANVVIWGTLLGACEKHGNVSVGEWAAERLQEAEPWNDGVYVVLSNVYAAAGMWGEV 413
Query: 269 ERIRKLMKDRRVAKAPGYS 213
ER+RK+M R+V K PG S
Sbjct: 414 ERVRKMMSGRKVTKFPGCS 432
>ref|XP_002280513.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77170
[Vitis vinifera] gi|297738768|emb|CBI28013.3| unnamed
protein product [Vitis vinifera]
Length = 479
Score = 121 bits (304), Expect = 8e-26
Identities = 53/85 (62%), Positives = 70/85 (82%)
Frame = -3
Query: 449 MPMEANSVVWGSLLGACEKHANVEVGEWAAKNLLDLEPWNDGVYVVLSNIYAEAKNWREV 270
MPM+AN +VWG L+GACEK+ NV++GEW A++LL+LEPWNDGV+VVLSNIYA WREV
Sbjct: 395 MPMKANVIVWGCLMGACEKYGNVKMGEWVAEHLLELEPWNDGVFVVLSNIYASRGLWREV 454
Query: 269 ERIRKLMKDRRVAKAPGYSSSST*D 195
ER+R +MK+R++ K P YS ++ D
Sbjct: 455 ERVRGVMKERKLDKVPAYSLATNAD 479
>gb|AFK47126.1| unknown [Medicago truncatula]
Length = 447
Score = 120 bits (302), Expect = 1e-25
Identities = 55/85 (64%), Positives = 66/85 (77%)
Frame = -3
Query: 449 MPMEANSVVWGSLLGACEKHANVEVGEWAAKNLLDLEPWNDGVYVVLSNIYAEAKNWREV 270
MPM+ NSVVWG L+GACEKH NV++ EW A+NL LEPWN+GVYVVLSNIYA W+EV
Sbjct: 363 MPMKPNSVVWGCLMGACEKHGNVDMAEWVAENLQALEPWNEGVYVVLSNIYANKGLWKEV 422
Query: 269 ERIRKLMKDRRVAKAPGYSSSST*D 195
ERIR MK+ R+AK P YS ++ D
Sbjct: 423 ERIRSFMKEGRLAKIPAYSITTNSD 447
>ref|XP_003630737.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524759|gb|AET05213.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 447
Score = 120 bits (302), Expect = 1e-25
Identities = 55/85 (64%), Positives = 66/85 (77%)
Frame = -3
Query: 449 MPMEANSVVWGSLLGACEKHANVEVGEWAAKNLLDLEPWNDGVYVVLSNIYAEAKNWREV 270
MPM+ NSVVWG L+GACEKH NV++ EW A+NL LEPWN+GVYVVLSNIYA W+EV
Sbjct: 363 MPMKPNSVVWGCLMGACEKHGNVDMAEWVAENLQALEPWNEGVYVVLSNIYANKGLWKEV 422
Query: 269 ERIRKLMKDRRVAKAPGYSSSST*D 195
ERIR MK+ R+AK P YS ++ D
Sbjct: 423 ERIRSFMKEGRLAKIPAYSITTNSD 447
>gb|EMS66989.1| hypothetical protein TRIUR3_06859 [Triticum urartu]
Length = 299
Score = 119 bits (298), Expect = 4e-25
Identities = 55/79 (69%), Positives = 62/79 (78%)
Frame = -3
Query: 449 MPMEANSVVWGSLLGACEKHANVEVGEWAAKNLLDLEPWNDGVYVVLSNIYAEAKNWREV 270
MPMEAN V+WG+LLGACEKH NV VG WAA+ LL PWNDGVYVVLSNIYA A W EV
Sbjct: 220 MPMEANVVIWGTLLGACEKHCNVNVGRWAAEQLLAAVPWNDGVYVVLSNIYAAAGMWGEV 279
Query: 269 ERIRKLMKDRRVAKAPGYS 213
E +RK+M +R+V K PG S
Sbjct: 280 EMVRKMMSERKVMKFPGCS 298
>gb|ESW32292.1| hypothetical protein PHAVU_002G309900g [Phaseolus vulgaris]
Length = 423
Score = 118 bits (295), Expect = 9e-25
Identities = 53/85 (62%), Positives = 68/85 (80%)
Frame = -3
Query: 449 MPMEANSVVWGSLLGACEKHANVEVGEWAAKNLLDLEPWNDGVYVVLSNIYAEAKNWREV 270
MPM+ NSVVWG L+GACEK+ NV++ EW AK+L +LEPW+DGVYVVLSNIYA W+EV
Sbjct: 339 MPMKPNSVVWGCLMGACEKYGNVDMAEWVAKHLQELEPWSDGVYVVLSNIYANRGLWKEV 398
Query: 269 ERIRKLMKDRRVAKAPGYSSSST*D 195
ERIR +M++ R+AK P YS ++ D
Sbjct: 399 ERIRSVMEEGRLAKIPAYSLTTNSD 423
>ref|XP_006348098.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g77170-like [Solanum tuberosum]
Length = 456
Score = 117 bits (293), Expect = 2e-24
Identities = 52/83 (62%), Positives = 65/83 (78%)
Frame = -3
Query: 449 MPMEANSVVWGSLLGACEKHANVEVGEWAAKNLLDLEPWNDGVYVVLSNIYAEAKNWREV 270
M M+ N V+WG L+GACEKH +V++GEW AK+L LEPWNDGVYVVLSNIYA W EV
Sbjct: 372 MSMKPNVVIWGCLMGACEKHGHVKMGEWVAKHLQQLEPWNDGVYVVLSNIYASNDMWEEV 431
Query: 269 ERIRKLMKDRRVAKAPGYSSSST 201
RIR +MK+R++AK P YS S++
Sbjct: 432 RRIRAIMKERKLAKIPAYSLSTS 454
>ref|XP_004503475.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g77170-like [Cicer arietinum]
Length = 451
Score = 117 bits (293), Expect = 2e-24
Identities = 53/85 (62%), Positives = 67/85 (78%)
Frame = -3
Query: 449 MPMEANSVVWGSLLGACEKHANVEVGEWAAKNLLDLEPWNDGVYVVLSNIYAEAKNWREV 270
MP++ NSVVWG L+GACEK+ NV++ EW A++LL LEPW DG YVVLSNIYA W+EV
Sbjct: 367 MPVKPNSVVWGCLMGACEKYGNVDMAEWVAEHLLALEPWTDGAYVVLSNIYANKGLWKEV 426
Query: 269 ERIRKLMKDRRVAKAPGYSSSST*D 195
ERIR LMK+ R+AK P YS +++ D
Sbjct: 427 ERIRSLMKEGRLAKVPAYSLTTSSD 451
>ref|XP_006494311.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g77170-like [Citrus sinensis]
Length = 471
Score = 116 bits (290), Expect = 3e-24
Identities = 53/85 (62%), Positives = 65/85 (76%)
Frame = -3
Query: 449 MPMEANSVVWGSLLGACEKHANVEVGEWAAKNLLDLEPWNDGVYVVLSNIYAEAKNWREV 270
MPM+AN V+WG L+GACEK NV++GEW AK+L +LEPW+DG YVVLSNIYA W EV
Sbjct: 387 MPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEV 446
Query: 269 ERIRKLMKDRRVAKAPGYSSSST*D 195
ERIR +MK R +AK P YS ++ D
Sbjct: 447 ERIRAVMKHRNLAKIPAYSLATRLD 471
>ref|XP_006451265.1| hypothetical protein CICLE_v10008215mg [Citrus clementina]
gi|557554491|gb|ESR64505.1| hypothetical protein
CICLE_v10008215mg [Citrus clementina]
Length = 461
Score = 116 bits (290), Expect = 3e-24
Identities = 53/85 (62%), Positives = 65/85 (76%)
Frame = -3
Query: 449 MPMEANSVVWGSLLGACEKHANVEVGEWAAKNLLDLEPWNDGVYVVLSNIYAEAKNWREV 270
MPM+AN V+WG L+GACEK NV++GEW AK+L +LEPW+DG YVVLSNIYA W EV
Sbjct: 377 MPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEV 436
Query: 269 ERIRKLMKDRRVAKAPGYSSSST*D 195
ERIR +MK R +AK P YS ++ D
Sbjct: 437 ERIRAVMKHRNLAKIPAYSLATRLD 461
>ref|XP_006390118.1| hypothetical protein EUTSA_v10018483mg [Eutrema salsugineum]
gi|557086552|gb|ESQ27404.1| hypothetical protein
EUTSA_v10018483mg [Eutrema salsugineum]
Length = 476
Score = 115 bits (287), Expect = 8e-24
Identities = 47/83 (56%), Positives = 68/83 (81%)
Frame = -3
Query: 449 MPMEANSVVWGSLLGACEKHANVEVGEWAAKNLLDLEPWNDGVYVVLSNIYAEAKNWREV 270
MPM+ + VVWG L+G CEK +VE+ EW A+++++LEPWNDGVYVVL+N+YA W++V
Sbjct: 392 MPMKPSVVVWGCLMGGCEKFGDVEMAEWVAQHMIELEPWNDGVYVVLANVYATRGMWKDV 451
Query: 269 ERIRKLMKDRRVAKAPGYSSSST 201
ER+RK+M+D+++AK P YS +ST
Sbjct: 452 ERVRKMMQDKKLAKIPAYSYAST 474
>ref|NP_177842.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215262|sp|Q3ECB8.1|PP128_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g77170 gi|332197823|gb|AEE35944.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 467
Score = 113 bits (283), Expect = 2e-23
Identities = 49/83 (59%), Positives = 65/83 (78%)
Frame = -3
Query: 449 MPMEANSVVWGSLLGACEKHANVEVGEWAAKNLLDLEPWNDGVYVVLSNIYAEAKNWREV 270
MPM+ N +VWG L+G CEK +VE+ EW A +++LEPWNDGVYVVL+N+YA W++V
Sbjct: 383 MPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDV 442
Query: 269 ERIRKLMKDRRVAKAPGYSSSST 201
ER+RKLMK ++VAK P YS +ST
Sbjct: 443 ERVRKLMKTKKVAKIPAYSYAST 465
>ref|XP_002889127.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297334968|gb|EFH65386.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 466
Score = 113 bits (283), Expect = 2e-23
Identities = 48/83 (57%), Positives = 66/83 (79%)
Frame = -3
Query: 449 MPMEANSVVWGSLLGACEKHANVEVGEWAAKNLLDLEPWNDGVYVVLSNIYAEAKNWREV 270
MPM+ N +VWG L+G CEK +VE+ EW A +++LEPWNDGVYVVL+N+YA W++V
Sbjct: 382 MPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALKGMWKDV 441
Query: 269 ERIRKLMKDRRVAKAPGYSSSST 201
ER+RK+MK+++VAK P YS +ST
Sbjct: 442 ERVRKVMKEKKVAKIPAYSYAST 464
>ref|XP_006300895.1| hypothetical protein CARUB_v10021262mg [Capsella rubella]
gi|482569605|gb|EOA33793.1| hypothetical protein
CARUB_v10021262mg [Capsella rubella]
Length = 464
Score = 112 bits (280), Expect = 5e-23
Identities = 46/83 (55%), Positives = 65/83 (78%)
Frame = -3
Query: 449 MPMEANSVVWGSLLGACEKHANVEVGEWAAKNLLDLEPWNDGVYVVLSNIYAEAKNWREV 270
MPM+ N +VWG L+G CEK +VE+ EW A+++++LEPWNDGVYVVL+N+YA W +V
Sbjct: 380 MPMKPNVMVWGCLMGGCEKFGDVEMAEWVARHMVELEPWNDGVYVVLANVYAVRGMWEDV 439
Query: 269 ERIRKLMKDRRVAKAPGYSSSST 201
ER+R +MK +++AK P YS +ST
Sbjct: 440 ERVRNMMKQKKLAKVPAYSYAST 462
>emb|CBI39775.3| unnamed protein product [Vitis vinifera]
Length = 599
Score = 112 bits (280), Expect = 5e-23
Identities = 52/80 (65%), Positives = 62/80 (77%)
Frame = -3
Query: 449 MPMEANSVVWGSLLGACEKHANVEVGEWAAKNLLDLEPWNDGVYVVLSNIYAEAKNWREV 270
MPM+ N VVWG+LLGAC H NVE+ E A K+LL+L+P NDG YVVLSNIYAEA W +
Sbjct: 390 MPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDT 449
Query: 269 ERIRKLMKDRRVAKAPGYSS 210
R+RK MKDR+V K PG+SS
Sbjct: 450 ARVRKFMKDRQVKKTPGWSS 469
>ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 632
Score = 112 bits (280), Expect = 5e-23
Identities = 52/80 (65%), Positives = 62/80 (77%)
Frame = -3
Query: 449 MPMEANSVVWGSLLGACEKHANVEVGEWAAKNLLDLEPWNDGVYVVLSNIYAEAKNWREV 270
MPM+ N VVWG+LLGAC H NVE+ E A K+LL+L+P NDG YVVLSNIYAEA W +
Sbjct: 423 MPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDT 482
Query: 269 ERIRKLMKDRRVAKAPGYSS 210
R+RK MKDR+V K PG+SS
Sbjct: 483 ARVRKFMKDRQVKKTPGWSS 502