BLASTX nr result
ID: Zingiber24_contig00049040
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00049040
(300 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOX96381.1| SNF2 domain-containing protein / helicase domain-... 119 5e-25
gb|ACJ64199.1| SNF2P [Triticum turgidum] 117 1e-24
gb|AAN14535.1|AF459085_1 SNF2P [Hordeum vulgare] 117 2e-24
gb|AAS58478.1| SNF2P [Hordeum vulgare subsp. vulgare] 117 2e-24
gb|EMT27430.1| Chromodomain-helicase-DNA-binding protein 1-like ... 116 4e-24
ref|XP_003562238.1| PREDICTED: chromodomain-helicase-DNA-binding... 116 4e-24
gb|ACF22767.1| SNF2P [Brachypodium distachyon] 116 4e-24
gb|AFW89901.1| hypothetical protein ZEAMMB73_126422, partial [Ze... 115 5e-24
gb|AFW89900.1| hypothetical protein ZEAMMB73_126422, partial [Ze... 115 5e-24
ref|XP_004986094.1| PREDICTED: chromodomain-helicase-DNA-binding... 115 6e-24
ref|XP_004986093.1| PREDICTED: chromodomain-helicase-DNA-binding... 115 6e-24
ref|XP_006650946.1| PREDICTED: chromodomain-helicase-DNA-binding... 115 8e-24
gb|ABR18490.1| SNF2P [Triticum turgidum] 114 1e-23
gb|AAN14536.1|AF459086_1 SNF2P [Oryza sativa Japonica Group] gi|... 113 2e-23
ref|NP_001048656.1| Os03g0101700 [Oryza sativa Japonica Group] g... 113 2e-23
ref|XP_002274161.2| PREDICTED: chromodomain-helicase-DNA-binding... 112 5e-23
emb|CBI16626.3| unnamed protein product [Vitis vinifera] 112 5e-23
emb|CAN83037.1| hypothetical protein VITISV_034336 [Vitis vinifera] 112 5e-23
gb|AAS58484.1| SNF2P [Triticum monococcum] 112 5e-23
ref|XP_004492182.1| PREDICTED: chromodomain-helicase-DNA-binding... 110 1e-22
>gb|EOX96381.1| SNF2 domain-containing protein / helicase domain-containing protein
[Theobroma cacao]
Length = 867
Score = 119 bits (297), Expect = 5e-25
Identities = 60/99 (60%), Positives = 74/99 (74%)
Frame = +1
Query: 1 PQVDKQALQRAHRIGQMKHVLAINLVTQHTIEEAIMRRAERKLWLSSNVVQQQDEVYGTG 180
PQVDKQALQRAHRIGQM HVL+INLVT+H++EE IMRRAERKL LS NVV
Sbjct: 476 PQVDKQALQRAHRIGQMNHVLSINLVTEHSVEEVIMRRAERKLQLSHNVVGDHVMEQEGK 535
Query: 181 KDIVAEEGDMKSLIIGLHMFDPTDMNKDSIDANSMVELN 297
++ AE GD++S+I GLHMFDPT++N + +D EL+
Sbjct: 536 ENAGAEMGDLRSIIFGLHMFDPTEINNEKVDELKTSELS 574
>gb|ACJ64199.1| SNF2P [Triticum turgidum]
Length = 882
Score = 117 bits (294), Expect = 1e-24
Identities = 57/100 (57%), Positives = 73/100 (73%)
Frame = +1
Query: 1 PQVDKQALQRAHRIGQMKHVLAINLVTQHTIEEAIMRRAERKLWLSSNVVQQQDEVYGTG 180
PQ DKQALQR HRIGQ+ HVL+INLV+Q TIEE IMRRAERKL LS N+ + +D G G
Sbjct: 476 PQADKQALQRTHRIGQLNHVLSINLVSQRTIEEVIMRRAERKLKLSHNIFEDKDATDGKG 535
Query: 181 KDIVAEEGDMKSLIIGLHMFDPTDMNKDSIDANSMVELNN 300
KD+ E DM+S+I GLH FDP D ++I+ ++ +L +
Sbjct: 536 KDLGNEANDMRSIIFGLHQFDPADTAAETINEETLEKLKS 575
>gb|AAN14535.1|AF459085_1 SNF2P [Hordeum vulgare]
Length = 882
Score = 117 bits (292), Expect = 2e-24
Identities = 57/100 (57%), Positives = 72/100 (72%)
Frame = +1
Query: 1 PQVDKQALQRAHRIGQMKHVLAINLVTQHTIEEAIMRRAERKLWLSSNVVQQQDEVYGTG 180
PQ DKQALQR HRIGQ+ HVL+INLV+Q TIEE IMRRAERKL LS N+ +D G G
Sbjct: 476 PQADKQALQRTHRIGQLNHVLSINLVSQRTIEEVIMRRAERKLKLSHNIFGDKDATDGKG 535
Query: 181 KDIVAEEGDMKSLIIGLHMFDPTDMNKDSIDANSMVELNN 300
KD E DM+S+I+GLH FDP D ++I+ ++ +L +
Sbjct: 536 KDFGNEANDMRSIILGLHQFDPADTAAETINEETLAKLKS 575
>gb|AAS58478.1| SNF2P [Hordeum vulgare subsp. vulgare]
Length = 882
Score = 117 bits (292), Expect = 2e-24
Identities = 57/100 (57%), Positives = 72/100 (72%)
Frame = +1
Query: 1 PQVDKQALQRAHRIGQMKHVLAINLVTQHTIEEAIMRRAERKLWLSSNVVQQQDEVYGTG 180
PQ DKQALQR HRIGQ+ HVL+INLV+Q TIEE IMRRAERKL LS N+ +D G G
Sbjct: 476 PQADKQALQRTHRIGQLNHVLSINLVSQRTIEEVIMRRAERKLKLSHNIFGDKDATDGKG 535
Query: 181 KDIVAEEGDMKSLIIGLHMFDPTDMNKDSIDANSMVELNN 300
KD E DM+S+I+GLH FDP D ++I+ ++ +L +
Sbjct: 536 KDFGNEANDMRSIILGLHQFDPADTAAETINEETLAKLKS 575
>gb|EMT27430.1| Chromodomain-helicase-DNA-binding protein 1-like protein [Aegilops
tauschii]
Length = 677
Score = 116 bits (290), Expect = 4e-24
Identities = 57/100 (57%), Positives = 72/100 (72%)
Frame = +1
Query: 1 PQVDKQALQRAHRIGQMKHVLAINLVTQHTIEEAIMRRAERKLWLSSNVVQQQDEVYGTG 180
PQ DKQALQR HRIGQ+ HVL+INLV+Q TIEE IMRRAERKL LS N+ +D G G
Sbjct: 372 PQADKQALQRTHRIGQLNHVLSINLVSQRTIEEVIMRRAERKLKLSHNIFGDKDATDGKG 431
Query: 181 KDIVAEEGDMKSLIIGLHMFDPTDMNKDSIDANSMVELNN 300
KD+ E DM+S+I GLH FDP D ++I+ ++ +L +
Sbjct: 432 KDLGNEANDMRSIIFGLHQFDPADTAAETINEETLEKLKS 471
>ref|XP_003562238.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like
[Brachypodium distachyon]
Length = 893
Score = 116 bits (290), Expect = 4e-24
Identities = 56/100 (56%), Positives = 73/100 (73%)
Frame = +1
Query: 1 PQVDKQALQRAHRIGQMKHVLAINLVTQHTIEEAIMRRAERKLWLSSNVVQQQDEVYGTG 180
PQ DKQALQRAHRIGQ+ HVL+INLV+Q TIEE IMRRAERKL LS N+ +D G G
Sbjct: 486 PQADKQALQRAHRIGQLNHVLSINLVSQRTIEEVIMRRAERKLKLSHNIFGDEDTTDGKG 545
Query: 181 KDIVAEEGDMKSLIIGLHMFDPTDMNKDSIDANSMVELNN 300
+D+ E DM+S+I GLH FDP D ++++ ++ +L +
Sbjct: 546 EDLRNEASDMRSIIFGLHQFDPADTATETMNEETLAKLES 585
>gb|ACF22767.1| SNF2P [Brachypodium distachyon]
Length = 721
Score = 116 bits (290), Expect = 4e-24
Identities = 56/100 (56%), Positives = 73/100 (73%)
Frame = +1
Query: 1 PQVDKQALQRAHRIGQMKHVLAINLVTQHTIEEAIMRRAERKLWLSSNVVQQQDEVYGTG 180
PQ DKQALQRAHRIGQ+ HVL+INLV+Q TIEE IMRRAERKL LS N+ +D G G
Sbjct: 354 PQADKQALQRAHRIGQLNHVLSINLVSQRTIEEVIMRRAERKLKLSHNIFGDEDTTDGKG 413
Query: 181 KDIVAEEGDMKSLIIGLHMFDPTDMNKDSIDANSMVELNN 300
+D+ E DM+S+I GLH FDP D ++++ ++ +L +
Sbjct: 414 EDLRNEASDMRSIIFGLHQFDPADTATETMNEETLAKLES 453
>gb|AFW89901.1| hypothetical protein ZEAMMB73_126422, partial [Zea mays]
Length = 818
Score = 115 bits (289), Expect = 5e-24
Identities = 57/97 (58%), Positives = 71/97 (73%)
Frame = +1
Query: 1 PQVDKQALQRAHRIGQMKHVLAINLVTQHTIEEAIMRRAERKLWLSSNVVQQQDEVYGTG 180
PQ DKQALQRAHRIGQ+ HVL+INLV+Q TIEE IMRRA+RKL LS N++ ++D G G
Sbjct: 412 PQADKQALQRAHRIGQLNHVLSINLVSQRTIEEVIMRRADRKLKLSHNIIGEEDGTDGKG 471
Query: 181 KDIVAEEGDMKSLIIGLHMFDPTDMNKDSIDANSMVE 291
D E DM+S+I GLH+FDP D ++ID + E
Sbjct: 472 GDPGIEASDMRSIIFGLHLFDPADTATETIDEDITAE 508
>gb|AFW89900.1| hypothetical protein ZEAMMB73_126422, partial [Zea mays]
Length = 767
Score = 115 bits (289), Expect = 5e-24
Identities = 57/97 (58%), Positives = 71/97 (73%)
Frame = +1
Query: 1 PQVDKQALQRAHRIGQMKHVLAINLVTQHTIEEAIMRRAERKLWLSSNVVQQQDEVYGTG 180
PQ DKQALQRAHRIGQ+ HVL+INLV+Q TIEE IMRRA+RKL LS N++ ++D G G
Sbjct: 361 PQADKQALQRAHRIGQLNHVLSINLVSQRTIEEVIMRRADRKLKLSHNIIGEEDGTDGKG 420
Query: 181 KDIVAEEGDMKSLIIGLHMFDPTDMNKDSIDANSMVE 291
D E DM+S+I GLH+FDP D ++ID + E
Sbjct: 421 GDPGIEASDMRSIIFGLHLFDPADTATETIDEDITAE 457
>ref|XP_004986094.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like isoform
X2 [Setaria italica]
Length = 854
Score = 115 bits (288), Expect = 6e-24
Identities = 57/97 (58%), Positives = 72/97 (74%)
Frame = +1
Query: 1 PQVDKQALQRAHRIGQMKHVLAINLVTQHTIEEAIMRRAERKLWLSSNVVQQQDEVYGTG 180
PQ DKQALQRAHRIGQ+ HVL+INLV++ TIEE IMRRAERKL LS NV+ ++D G
Sbjct: 430 PQADKQALQRAHRIGQLNHVLSINLVSERTIEEVIMRRAERKLKLSHNVIGEEDRTDVKG 489
Query: 181 KDIVAEEGDMKSLIIGLHMFDPTDMNKDSIDANSMVE 291
D+ E DM+S+I GLH+FDP D D+I+ ++ E
Sbjct: 490 GDMGNEASDMRSIIFGLHLFDPADTTTDTINEDTTSE 526
>ref|XP_004986093.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like isoform
X1 [Setaria italica]
Length = 899
Score = 115 bits (288), Expect = 6e-24
Identities = 57/97 (58%), Positives = 72/97 (74%)
Frame = +1
Query: 1 PQVDKQALQRAHRIGQMKHVLAINLVTQHTIEEAIMRRAERKLWLSSNVVQQQDEVYGTG 180
PQ DKQALQRAHRIGQ+ HVL+INLV++ TIEE IMRRAERKL LS NV+ ++D G
Sbjct: 475 PQADKQALQRAHRIGQLNHVLSINLVSERTIEEVIMRRAERKLKLSHNVIGEEDRTDVKG 534
Query: 181 KDIVAEEGDMKSLIIGLHMFDPTDMNKDSIDANSMVE 291
D+ E DM+S+I GLH+FDP D D+I+ ++ E
Sbjct: 535 GDMGNEASDMRSIIFGLHLFDPADTTTDTINEDTTSE 571
>ref|XP_006650946.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Oryza
brachyantha]
Length = 864
Score = 115 bits (287), Expect = 8e-24
Identities = 55/97 (56%), Positives = 75/97 (77%)
Frame = +1
Query: 1 PQVDKQALQRAHRIGQMKHVLAINLVTQHTIEEAIMRRAERKLWLSSNVVQQQDEVYGTG 180
PQ DKQ+LQRAHRIGQ+ HVL+INLV+Q TIEE IM+RAERKL LS +++ ++D G G
Sbjct: 453 PQADKQSLQRAHRIGQLNHVLSINLVSQRTIEEIIMQRAERKLKLSHSIIGEEDATDGKG 512
Query: 181 KDIVAEEGDMKSLIIGLHMFDPTDMNKDSIDANSMVE 291
K + E DM+S+I GLH+FDPTD ++I+ ++ +E
Sbjct: 513 KYLENEASDMRSIIFGLHLFDPTDTTAETINDDTNLE 549
>gb|ABR18490.1| SNF2P [Triticum turgidum]
Length = 878
Score = 114 bits (285), Expect = 1e-23
Identities = 56/100 (56%), Positives = 71/100 (71%)
Frame = +1
Query: 1 PQVDKQALQRAHRIGQMKHVLAINLVTQHTIEEAIMRRAERKLWLSSNVVQQQDEVYGTG 180
PQ DKQALQR HRIGQ+ HVL+INLV+Q TIEE IMRRAERKL LS N+ +D G G
Sbjct: 476 PQADKQALQRTHRIGQLNHVLSINLVSQRTIEEVIMRRAERKLKLSHNIFGDKDATDGKG 535
Query: 181 KDIVAEEGDMKSLIIGLHMFDPTDMNKDSIDANSMVELNN 300
D+ E DM+S+I GLH FDP D ++I+ ++ +L +
Sbjct: 536 NDLGNEANDMRSIIFGLHQFDPADTAAETINEETLEKLKS 575
>gb|AAN14536.1|AF459086_1 SNF2P [Oryza sativa Japonica Group] gi|23193485|gb|AAN14537.1|
SNF2P [Oryza sativa Japonica Group]
Length = 894
Score = 113 bits (283), Expect = 2e-23
Identities = 55/97 (56%), Positives = 74/97 (76%)
Frame = +1
Query: 1 PQVDKQALQRAHRIGQMKHVLAINLVTQHTIEEAIMRRAERKLWLSSNVVQQQDEVYGTG 180
PQ DKQALQRAHRIGQ+ +VL+INLV+Q TIEE IMRRAERKL LS +V+ ++D YG G
Sbjct: 480 PQADKQALQRAHRIGQLNNVLSINLVSQRTIEEVIMRRAERKLKLSHSVIGEEDATYGKG 539
Query: 181 KDIVAEEGDMKSLIIGLHMFDPTDMNKDSIDANSMVE 291
K + E DM+S+I GLH+FD +D ++++ ++ E
Sbjct: 540 KYVENEASDMRSIIFGLHLFDTSDTTAETMNDDTASE 576
>ref|NP_001048656.1| Os03g0101700 [Oryza sativa Japonica Group]
gi|108705687|gb|ABF93482.1| SNF2P, putative, expressed
[Oryza sativa Japonica Group]
gi|113547127|dbj|BAF10570.1| Os03g0101700 [Oryza sativa
Japonica Group] gi|215694686|dbj|BAG89877.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 842
Score = 113 bits (283), Expect = 2e-23
Identities = 55/97 (56%), Positives = 74/97 (76%)
Frame = +1
Query: 1 PQVDKQALQRAHRIGQMKHVLAINLVTQHTIEEAIMRRAERKLWLSSNVVQQQDEVYGTG 180
PQ DKQALQRAHRIGQ+ +VL+INLV+Q TIEE IMRRAERKL LS +V+ ++D YG G
Sbjct: 428 PQADKQALQRAHRIGQLNNVLSINLVSQRTIEEVIMRRAERKLKLSHSVIGEEDATYGKG 487
Query: 181 KDIVAEEGDMKSLIIGLHMFDPTDMNKDSIDANSMVE 291
K + E DM+S+I GLH+FD +D ++++ ++ E
Sbjct: 488 KYVENEASDMRSIIFGLHLFDTSDTTAETMNDDTASE 524
>ref|XP_002274161.2| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Vitis
vinifera]
Length = 876
Score = 112 bits (280), Expect = 5e-23
Identities = 61/100 (61%), Positives = 75/100 (75%), Gaps = 1/100 (1%)
Frame = +1
Query: 1 PQVDKQALQRAHRIGQMKHVLAINLVTQHTIEEAIMRRAERKLWLSSNVVQQQDEVYGTG 180
PQVDKQALQRAHRIGQM HVL+INLVT T+EE IMRRAERKL LS NVV + D + G
Sbjct: 476 PQVDKQALQRAHRIGQMNHVLSINLVTGRTVEEIIMRRAERKLQLSHNVVGEVD-IDREG 534
Query: 181 KDIV-AEEGDMKSLIIGLHMFDPTDMNKDSIDANSMVELN 297
K++ AE GD++S+I GL M DP+++N D +M EL+
Sbjct: 535 KEMAGAEAGDLRSVIFGLRMIDPSEINNDESSEPNMSELD 574
>emb|CBI16626.3| unnamed protein product [Vitis vinifera]
Length = 832
Score = 112 bits (280), Expect = 5e-23
Identities = 61/100 (61%), Positives = 75/100 (75%), Gaps = 1/100 (1%)
Frame = +1
Query: 1 PQVDKQALQRAHRIGQMKHVLAINLVTQHTIEEAIMRRAERKLWLSSNVVQQQDEVYGTG 180
PQVDKQALQRAHRIGQM HVL+INLVT T+EE IMRRAERKL LS NVV + D + G
Sbjct: 475 PQVDKQALQRAHRIGQMNHVLSINLVTGRTVEEIIMRRAERKLQLSHNVVGEVD-IDREG 533
Query: 181 KDIV-AEEGDMKSLIIGLHMFDPTDMNKDSIDANSMVELN 297
K++ AE GD++S+I GL M DP+++N D +M EL+
Sbjct: 534 KEMAGAEAGDLRSVIFGLRMIDPSEINNDESSEPNMSELD 573
>emb|CAN83037.1| hypothetical protein VITISV_034336 [Vitis vinifera]
Length = 1054
Score = 112 bits (280), Expect = 5e-23
Identities = 61/100 (61%), Positives = 75/100 (75%), Gaps = 1/100 (1%)
Frame = +1
Query: 1 PQVDKQALQRAHRIGQMKHVLAINLVTQHTIEEAIMRRAERKLWLSSNVVQQQDEVYGTG 180
PQVDKQALQRAHRIGQM HVL+INLVT T+EE IMRRAERKL LS NVV + D + G
Sbjct: 556 PQVDKQALQRAHRIGQMNHVLSINLVTGRTVEEIIMRRAERKLQLSHNVVGEVD-IDREG 614
Query: 181 KDIV-AEEGDMKSLIIGLHMFDPTDMNKDSIDANSMVELN 297
K++ AE GD++S+I GL M DP+++N D +M EL+
Sbjct: 615 KEMAGAEAGDLRSVIFGLRMIDPSEINNDESSEPNMSELD 654
>gb|AAS58484.1| SNF2P [Triticum monococcum]
Length = 882
Score = 112 bits (280), Expect = 5e-23
Identities = 56/100 (56%), Positives = 70/100 (70%)
Frame = +1
Query: 1 PQVDKQALQRAHRIGQMKHVLAINLVTQHTIEEAIMRRAERKLWLSSNVVQQQDEVYGTG 180
PQ DKQALQR HRIGQ+ HVL+INLV+Q TIEE IMRRAERKL LS N+ +D G G
Sbjct: 476 PQADKQALQRTHRIGQLNHVLSINLVSQRTIEEVIMRRAERKLKLSHNIFGDKDATDGKG 535
Query: 181 KDIVAEEGDMKSLIIGLHMFDPTDMNKDSIDANSMVELNN 300
D+ E DM S+I GLH FDP D ++I+ ++ +L +
Sbjct: 536 NDLGNEANDMCSIIFGLHQFDPADTAAETINEETLEKLKS 575
>ref|XP_004492182.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Cicer
arietinum]
Length = 878
Score = 110 bits (276), Expect = 1e-22
Identities = 56/86 (65%), Positives = 64/86 (74%)
Frame = +1
Query: 1 PQVDKQALQRAHRIGQMKHVLAINLVTQHTIEEAIMRRAERKLWLSSNVVQQQDEVYGTG 180
PQVDKQALQRAHRIGQM HVL INLVT+HT+EE IMRRAERKL LS NV +
Sbjct: 476 PQVDKQALQRAHRIGQMNHVLCINLVTEHTVEEVIMRRAERKLQLSLNVTGDNILEHEDK 535
Query: 181 KDIVAEEGDMKSLIIGLHMFDPTDMN 258
K GD+KS+I+GLHMFDP ++N
Sbjct: 536 KLSAVGAGDLKSIIVGLHMFDPNEIN 561