BLASTX nr result

ID: Zingiber24_contig00048898 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00048898
         (441 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006845691.1| hypothetical protein AMTR_s00019p00236850 [A...    60   2e-07
ref|XP_002532804.1| hypothetical protein RCOM_0172420 [Ricinus c...    56   6e-06

>ref|XP_006845691.1| hypothetical protein AMTR_s00019p00236850 [Amborella trichopoda]
           gi|548848263|gb|ERN07366.1| hypothetical protein
           AMTR_s00019p00236850 [Amborella trichopoda]
          Length = 301

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 26/39 (66%), Positives = 35/39 (89%)
 Frame = -3

Query: 121 MKKHVECHGRDSVRNTMLKHEDIFRQQVRELHRLYQVQK 5
           M++  + H R+SV+NTMLKHE+IF++QVRELHRLY+VQK
Sbjct: 54  MERFQDQHSRESVKNTMLKHEEIFKEQVRELHRLYRVQK 92


>ref|XP_002532804.1| hypothetical protein RCOM_0172420 [Ricinus communis]
           gi|223527446|gb|EEF29582.1| hypothetical protein
           RCOM_0172420 [Ricinus communis]
          Length = 301

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 33/64 (51%), Positives = 38/64 (59%)
 Frame = -3

Query: 193 SNSFAVTGAVKTSDSNALDQRRFPMKKHVECHGRDSVRNTMLKHEDIFRQQVRELHRLYQ 14
           SN+F  TG V    S+  D  R P K +      D +R TM  HEDIF+ QVRELHRLY 
Sbjct: 39  SNNFQSTGRVNEHHSSMND--RMPEKNNT-----DFIRKTMQIHEDIFKHQVRELHRLYS 91

Query: 13  VQKM 2
           VQKM
Sbjct: 92  VQKM 95


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