BLASTX nr result
ID: Zingiber24_contig00048891
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00048891
(283 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002529996.1| DNA-directed RNA polymerase I subunit, putat... 127 2e-27
tpg|DAA49470.1| TPA: hypothetical protein ZEAMMB73_824600 [Zea m... 125 4e-27
tpg|DAA49469.1| TPA: hypothetical protein ZEAMMB73_824600 [Zea m... 125 4e-27
ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I sub... 124 1e-26
emb|CBI35100.3| unnamed protein product [Vitis vinifera] 124 1e-26
ref|XP_004307166.1| PREDICTED: DNA-directed RNA polymerase I sub... 123 3e-26
gb|EMT17614.1| DNA-directed RNA polymerase I subunit RPA2 [Aegil... 122 5e-26
gb|EMS50874.1| putative DNA-directed RNA polymerase I subunit RP... 122 5e-26
gb|EEE51207.1| hypothetical protein OsJ_32024 [Oryza sativa Japo... 122 5e-26
gb|EEC67242.1| hypothetical protein OsI_34174 [Oryza sativa Indi... 122 5e-26
gb|ABB47823.2| DNA-directed RNA polymerase, beta subunit family ... 122 5e-26
gb|AAM92814.1| putative DNA-directed RNA polymerase I subunit, 5... 122 5e-26
ref|XP_006464287.1| PREDICTED: probable DNA-directed RNA polymer... 121 8e-26
ref|XP_006428126.1| hypothetical protein CICLE_v10024768mg [Citr... 121 8e-26
gb|EXC31692.1| putative DNA-directed RNA polymerase I subunit RP... 121 1e-25
ref|XP_006661904.1| PREDICTED: probable DNA-directed RNA polymer... 121 1e-25
ref|XP_002297732.2| DNA-directed RNA polymerase family protein [... 121 1e-25
ref|XP_003574126.1| PREDICTED: DNA-directed RNA polymerase I sub... 120 2e-25
ref|XP_004164992.1| PREDICTED: DNA-directed RNA polymerase I sub... 120 2e-25
ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I sub... 120 2e-25
>ref|XP_002529996.1| DNA-directed RNA polymerase I subunit, putative [Ricinus communis]
gi|223530519|gb|EEF32401.1| DNA-directed RNA polymerase I
subunit, putative [Ricinus communis]
Length = 1159
Score = 127 bits (319), Expect = 2e-27
Identities = 67/98 (68%), Positives = 73/98 (74%), Gaps = 4/98 (4%)
Frame = -2
Query: 282 FVDATPFTRS----NCSKXXXXXXXXXXELGQMLIAYGFNYYGEEALYSGVYGTRLPFKI 115
FVDATPFT S N + +LG ML ++GFNY+G E LYSGVYGT L +I
Sbjct: 944 FVDATPFTSSVKNVNGGEAKSESESLVDDLGNMLRSHGFNYHGVEVLYSGVYGTELTCEI 1003
Query: 114 FIGPVYYQRLRHMVSDKFQVRSTGTVDQITRQPIGGRK 1
FIGPVYYQRLRHMVSDKFQVRSTGTVDQITRQPI GRK
Sbjct: 1004 FIGPVYYQRLRHMVSDKFQVRSTGTVDQITRQPIKGRK 1041
>tpg|DAA49470.1| TPA: hypothetical protein ZEAMMB73_824600 [Zea mays]
Length = 1162
Score = 125 bits (315), Expect = 4e-27
Identities = 63/95 (66%), Positives = 71/95 (74%), Gaps = 1/95 (1%)
Frame = -2
Query: 282 FVDATPFTRS-NCSKXXXXXXXXXXELGQMLIAYGFNYYGEEALYSGVYGTRLPFKIFIG 106
F+DATPF S K ELG ML +YGFNY+G E LYSGV+GT + +IFIG
Sbjct: 945 FIDATPFANSLKKDKDSDKPNSIVDELGPMLASYGFNYHGNEVLYSGVFGTEMDCEIFIG 1004
Query: 105 PVYYQRLRHMVSDKFQVRSTGTVDQITRQPIGGRK 1
PVYYQRLRHMVSDKFQVR+TG +DQITRQPIGGRK
Sbjct: 1005 PVYYQRLRHMVSDKFQVRTTGRIDQITRQPIGGRK 1039
>tpg|DAA49469.1| TPA: hypothetical protein ZEAMMB73_824600 [Zea mays]
Length = 1128
Score = 125 bits (315), Expect = 4e-27
Identities = 63/95 (66%), Positives = 71/95 (74%), Gaps = 1/95 (1%)
Frame = -2
Query: 282 FVDATPFTRS-NCSKXXXXXXXXXXELGQMLIAYGFNYYGEEALYSGVYGTRLPFKIFIG 106
F+DATPF S K ELG ML +YGFNY+G E LYSGV+GT + +IFIG
Sbjct: 911 FIDATPFANSLKKDKDSDKPNSIVDELGPMLASYGFNYHGNEVLYSGVFGTEMDCEIFIG 970
Query: 105 PVYYQRLRHMVSDKFQVRSTGTVDQITRQPIGGRK 1
PVYYQRLRHMVSDKFQVR+TG +DQITRQPIGGRK
Sbjct: 971 PVYYQRLRHMVSDKFQVRTTGRIDQITRQPIGGRK 1005
>ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Vitis
vinifera]
Length = 1142
Score = 124 bits (311), Expect = 1e-26
Identities = 65/97 (67%), Positives = 71/97 (73%), Gaps = 3/97 (3%)
Frame = -2
Query: 282 FVDATPFT---RSNCSKXXXXXXXXXXELGQMLIAYGFNYYGEEALYSGVYGTRLPFKIF 112
FVDATPF+ R + ELG ML +YGFNY+G E LYSG YGT L +IF
Sbjct: 928 FVDATPFSDSLRKANGEAGSESSSLVDELGSMLTSYGFNYHGVEVLYSGFYGTELTCEIF 987
Query: 111 IGPVYYQRLRHMVSDKFQVRSTGTVDQITRQPIGGRK 1
IGPVYYQRLRHMVSDKFQVRSTGTVDQ+TRQPI GRK
Sbjct: 988 IGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPIKGRK 1024
>emb|CBI35100.3| unnamed protein product [Vitis vinifera]
Length = 1113
Score = 124 bits (311), Expect = 1e-26
Identities = 65/97 (67%), Positives = 71/97 (73%), Gaps = 3/97 (3%)
Frame = -2
Query: 282 FVDATPFT---RSNCSKXXXXXXXXXXELGQMLIAYGFNYYGEEALYSGVYGTRLPFKIF 112
FVDATPF+ R + ELG ML +YGFNY+G E LYSG YGT L +IF
Sbjct: 921 FVDATPFSDSLRKANGEAGSESSSLVDELGSMLTSYGFNYHGVEVLYSGFYGTELTCEIF 980
Query: 111 IGPVYYQRLRHMVSDKFQVRSTGTVDQITRQPIGGRK 1
IGPVYYQRLRHMVSDKFQVRSTGTVDQ+TRQPI GRK
Sbjct: 981 IGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPIKGRK 1017
>ref|XP_004307166.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Fragaria
vesca subsp. vesca]
Length = 1169
Score = 123 bits (308), Expect = 3e-26
Identities = 66/98 (67%), Positives = 69/98 (70%), Gaps = 4/98 (4%)
Frame = -2
Query: 282 FVDATPFTRS----NCSKXXXXXXXXXXELGQMLIAYGFNYYGEEALYSGVYGTRLPFKI 115
FVDATPF S N ELG+ML GFNYYG E LYSGVYGT L +I
Sbjct: 955 FVDATPFANSEKKVNEETNGEKSKTLVDELGEMLKVKGFNYYGAEVLYSGVYGTELTCEI 1014
Query: 114 FIGPVYYQRLRHMVSDKFQVRSTGTVDQITRQPIGGRK 1
FIGPVYYQRLRHMVSDKFQVRSTG VDQ+TRQPI GRK
Sbjct: 1015 FIGPVYYQRLRHMVSDKFQVRSTGMVDQVTRQPIKGRK 1052
>gb|EMT17614.1| DNA-directed RNA polymerase I subunit RPA2 [Aegilops tauschii]
Length = 1856
Score = 122 bits (306), Expect = 5e-26
Identities = 60/96 (62%), Positives = 72/96 (75%), Gaps = 2/96 (2%)
Frame = -2
Query: 282 FVDATPFTRS--NCSKXXXXXXXXXXELGQMLIAYGFNYYGEEALYSGVYGTRLPFKIFI 109
F+DATPF S + ELG ML +YGFN++G E LYSG++GT L F+IFI
Sbjct: 988 FIDATPFASSVKEDGENRCKYDSIVDELGPMLASYGFNHHGTEVLYSGLFGTELQFEIFI 1047
Query: 108 GPVYYQRLRHMVSDKFQVRSTGTVDQITRQPIGGRK 1
GPVYYQRLRHMVSDKFQVR+TG +DQ+T+QPIGGRK
Sbjct: 1048 GPVYYQRLRHMVSDKFQVRTTGRIDQVTKQPIGGRK 1083
>gb|EMS50874.1| putative DNA-directed RNA polymerase I subunit RPA2 [Triticum urartu]
Length = 1253
Score = 122 bits (306), Expect = 5e-26
Identities = 60/96 (62%), Positives = 72/96 (75%), Gaps = 2/96 (2%)
Frame = -2
Query: 282 FVDATPFTRS--NCSKXXXXXXXXXXELGQMLIAYGFNYYGEEALYSGVYGTRLPFKIFI 109
F+DATPF S + ELG ML +YGFN++G E LYSG++GT L F+IFI
Sbjct: 888 FIDATPFASSVKEDGENRCKYDSIVDELGPMLASYGFNHHGTEVLYSGLFGTELQFEIFI 947
Query: 108 GPVYYQRLRHMVSDKFQVRSTGTVDQITRQPIGGRK 1
GPVYYQRLRHMVSDKFQVR+TG +DQ+T+QPIGGRK
Sbjct: 948 GPVYYQRLRHMVSDKFQVRTTGRIDQVTKQPIGGRK 983
>gb|EEE51207.1| hypothetical protein OsJ_32024 [Oryza sativa Japonica Group]
Length = 1150
Score = 122 bits (306), Expect = 5e-26
Identities = 61/94 (64%), Positives = 70/94 (74%)
Frame = -2
Query: 282 FVDATPFTRSNCSKXXXXXXXXXXELGQMLIAYGFNYYGEEALYSGVYGTRLPFKIFIGP 103
F+DATPF S ELG ML +YGFNY+G E LYSGV+GT + +IF+GP
Sbjct: 933 FIDATPFA----SSVKERSNSIVDELGPMLASYGFNYHGTEILYSGVFGTEMKCEIFLGP 988
Query: 102 VYYQRLRHMVSDKFQVRSTGTVDQITRQPIGGRK 1
VYYQRLRHMVSDKFQVR+TG +DQITRQPIGGRK
Sbjct: 989 VYYQRLRHMVSDKFQVRTTGRIDQITRQPIGGRK 1022
>gb|EEC67242.1| hypothetical protein OsI_34174 [Oryza sativa Indica Group]
Length = 1086
Score = 122 bits (306), Expect = 5e-26
Identities = 61/94 (64%), Positives = 70/94 (74%)
Frame = -2
Query: 282 FVDATPFTRSNCSKXXXXXXXXXXELGQMLIAYGFNYYGEEALYSGVYGTRLPFKIFIGP 103
F+DATPF S ELG ML +YGFNY+G E LYSGV+GT + +IF+GP
Sbjct: 869 FIDATPFA----SSVKERSNSIVDELGPMLASYGFNYHGTEILYSGVFGTEMKCEIFLGP 924
Query: 102 VYYQRLRHMVSDKFQVRSTGTVDQITRQPIGGRK 1
VYYQRLRHMVSDKFQVR+TG +DQITRQPIGGRK
Sbjct: 925 VYYQRLRHMVSDKFQVRTTGRIDQITRQPIGGRK 958
>gb|ABB47823.2| DNA-directed RNA polymerase, beta subunit family protein, expressed
[Oryza sativa Japonica Group]
Length = 1044
Score = 122 bits (306), Expect = 5e-26
Identities = 61/94 (64%), Positives = 70/94 (74%)
Frame = -2
Query: 282 FVDATPFTRSNCSKXXXXXXXXXXELGQMLIAYGFNYYGEEALYSGVYGTRLPFKIFIGP 103
F+DATPF S ELG ML +YGFNY+G E LYSGV+GT + +IF+GP
Sbjct: 827 FIDATPFA----SSVKERSNSIVDELGPMLASYGFNYHGTEILYSGVFGTEMKCEIFLGP 882
Query: 102 VYYQRLRHMVSDKFQVRSTGTVDQITRQPIGGRK 1
VYYQRLRHMVSDKFQVR+TG +DQITRQPIGGRK
Sbjct: 883 VYYQRLRHMVSDKFQVRTTGRIDQITRQPIGGRK 916
>gb|AAM92814.1| putative DNA-directed RNA polymerase I subunit, 5'-partial [Oryza
sativa Japonica Group]
Length = 855
Score = 122 bits (306), Expect = 5e-26
Identities = 61/94 (64%), Positives = 70/94 (74%)
Frame = -2
Query: 282 FVDATPFTRSNCSKXXXXXXXXXXELGQMLIAYGFNYYGEEALYSGVYGTRLPFKIFIGP 103
F+DATPF S ELG ML +YGFNY+G E LYSGV+GT + +IF+GP
Sbjct: 638 FIDATPFA----SSVKERSNSIVDELGPMLASYGFNYHGTEILYSGVFGTEMKCEIFLGP 693
Query: 102 VYYQRLRHMVSDKFQVRSTGTVDQITRQPIGGRK 1
VYYQRLRHMVSDKFQVR+TG +DQITRQPIGGRK
Sbjct: 694 VYYQRLRHMVSDKFQVRTTGRIDQITRQPIGGRK 727
>ref|XP_006464287.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
isoform X1 [Citrus sinensis]
Length = 1175
Score = 121 bits (304), Expect = 8e-26
Identities = 65/98 (66%), Positives = 70/98 (71%), Gaps = 4/98 (4%)
Frame = -2
Query: 282 FVDATPFTRS----NCSKXXXXXXXXXXELGQMLIAYGFNYYGEEALYSGVYGTRLPFKI 115
F+DATPF S N ELG+ML GFNY+G E LYSGVYGT L +I
Sbjct: 960 FMDATPFANSVKKTNGDTGTDESKSLVDELGEMLRTCGFNYHGVEVLYSGVYGTELTCEI 1019
Query: 114 FIGPVYYQRLRHMVSDKFQVRSTGTVDQITRQPIGGRK 1
FIGPVYYQRLRHMVSDKFQVRSTGT+DQITRQPI GRK
Sbjct: 1020 FIGPVYYQRLRHMVSDKFQVRSTGTMDQITRQPIKGRK 1057
>ref|XP_006428126.1| hypothetical protein CICLE_v10024768mg [Citrus clementina]
gi|557530116|gb|ESR41366.1| hypothetical protein
CICLE_v10024768mg [Citrus clementina]
Length = 1082
Score = 121 bits (304), Expect = 8e-26
Identities = 65/98 (66%), Positives = 70/98 (71%), Gaps = 4/98 (4%)
Frame = -2
Query: 282 FVDATPFTRS----NCSKXXXXXXXXXXELGQMLIAYGFNYYGEEALYSGVYGTRLPFKI 115
F+DATPF S N ELG+ML GFNY+G E LYSGVYGT L +I
Sbjct: 867 FMDATPFANSVKKTNGDTGTDESKSLVDELGEMLRTCGFNYHGVEVLYSGVYGTELTCEI 926
Query: 114 FIGPVYYQRLRHMVSDKFQVRSTGTVDQITRQPIGGRK 1
FIGPVYYQRLRHMVSDKFQVRSTGT+DQITRQPI GRK
Sbjct: 927 FIGPVYYQRLRHMVSDKFQVRSTGTMDQITRQPIKGRK 964
>gb|EXC31692.1| putative DNA-directed RNA polymerase I subunit RPA2 [Morus notabilis]
Length = 1243
Score = 121 bits (303), Expect = 1e-25
Identities = 65/98 (66%), Positives = 72/98 (73%), Gaps = 4/98 (4%)
Frame = -2
Query: 282 FVDATPFTRS-NCSKXXXXXXXXXXE---LGQMLIAYGFNYYGEEALYSGVYGTRLPFKI 115
+VDATPF+ S N +K LGQML GFNY+G E LYSGVYGT LP +I
Sbjct: 961 YVDATPFSGSLNEAKEETVSKHSTSLVDELGQMLREKGFNYHGVEVLYSGVYGTELPCEI 1020
Query: 114 FIGPVYYQRLRHMVSDKFQVRSTGTVDQITRQPIGGRK 1
FIGPVYYQRLRHMVSDKFQVRSTG +DQ+TRQPI GRK
Sbjct: 1021 FIGPVYYQRLRHMVSDKFQVRSTGIIDQVTRQPIKGRK 1058
>ref|XP_006661904.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
[Oryza brachyantha]
Length = 1057
Score = 121 bits (303), Expect = 1e-25
Identities = 60/96 (62%), Positives = 72/96 (75%), Gaps = 2/96 (2%)
Frame = -2
Query: 282 FVDATPFTRS--NCSKXXXXXXXXXXELGQMLIAYGFNYYGEEALYSGVYGTRLPFKIFI 109
F+DATPF+ S + ELG ML +YGFNY+G E LYSGV+GT + +IF+
Sbjct: 836 FMDATPFSSSVEKRDENSCTSNSIVDELGPMLASYGFNYHGTEVLYSGVFGTEMNCEIFL 895
Query: 108 GPVYYQRLRHMVSDKFQVRSTGTVDQITRQPIGGRK 1
GPVYYQRLRHMVSDKFQVR+TG +DQITRQP+GGRK
Sbjct: 896 GPVYYQRLRHMVSDKFQVRTTGRIDQITRQPVGGRK 931
>ref|XP_002297732.2| DNA-directed RNA polymerase family protein [Populus trichocarpa]
gi|550346693|gb|EEE82537.2| DNA-directed RNA polymerase
family protein [Populus trichocarpa]
Length = 1117
Score = 121 bits (303), Expect = 1e-25
Identities = 65/98 (66%), Positives = 71/98 (72%), Gaps = 4/98 (4%)
Frame = -2
Query: 282 FVDATPFTR----SNCSKXXXXXXXXXXELGQMLIAYGFNYYGEEALYSGVYGTRLPFKI 115
FVDATPF SN + ELG+ML + GFN++G E LYSGVYGT L +I
Sbjct: 905 FVDATPFASTVRASNAGEAKSEPESLVDELGKMLKSKGFNHHGVEVLYSGVYGTELTCEI 964
Query: 114 FIGPVYYQRLRHMVSDKFQVRSTGTVDQITRQPIGGRK 1
FIGPVYYQRLRHMVSDKFQVRSTG VDQITRQPI GRK
Sbjct: 965 FIGPVYYQRLRHMVSDKFQVRSTGPVDQITRQPIKGRK 1002
>ref|XP_003574126.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Brachypodium
distachyon]
Length = 1181
Score = 120 bits (301), Expect = 2e-25
Identities = 61/96 (63%), Positives = 70/96 (72%), Gaps = 2/96 (2%)
Frame = -2
Query: 282 FVDATPFTRS--NCSKXXXXXXXXXXELGQMLIAYGFNYYGEEALYSGVYGTRLPFKIFI 109
FVDATPF S E+G ML +YGFNY+G E LYSG++GT L +IFI
Sbjct: 962 FVDATPFASSVKEGDGNPWKPKSIVDEMGPMLASYGFNYHGVEVLYSGLFGTELTCEIFI 1021
Query: 108 GPVYYQRLRHMVSDKFQVRSTGTVDQITRQPIGGRK 1
GPVYYQRLRHMVSDKFQVR+TG +DQ+TRQPIGGRK
Sbjct: 1022 GPVYYQRLRHMVSDKFQVRTTGRIDQVTRQPIGGRK 1057
>ref|XP_004164992.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Cucumis
sativus]
Length = 719
Score = 120 bits (300), Expect = 2e-25
Identities = 63/98 (64%), Positives = 70/98 (71%), Gaps = 4/98 (4%)
Frame = -2
Query: 282 FVDATPF----TRSNCSKXXXXXXXXXXELGQMLIAYGFNYYGEEALYSGVYGTRLPFKI 115
FV+ATPF ++N ELG LI GFNY+G E LYSGVYGT L +I
Sbjct: 505 FVNATPFRSSVNKTNAGDEETNGETLVDELGSTLIKKGFNYHGLEVLYSGVYGTELTCEI 564
Query: 114 FIGPVYYQRLRHMVSDKFQVRSTGTVDQITRQPIGGRK 1
FIGPVYYQRLRHMVSDK+QVRSTGTVDQ+TRQPI GRK
Sbjct: 565 FIGPVYYQRLRHMVSDKYQVRSTGTVDQVTRQPIKGRK 602
>ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Cucumis
sativus]
Length = 1173
Score = 120 bits (300), Expect = 2e-25
Identities = 63/98 (64%), Positives = 70/98 (71%), Gaps = 4/98 (4%)
Frame = -2
Query: 282 FVDATPF----TRSNCSKXXXXXXXXXXELGQMLIAYGFNYYGEEALYSGVYGTRLPFKI 115
FV+ATPF ++N ELG LI GFNY+G E LYSGVYGT L +I
Sbjct: 959 FVNATPFRSSVNKTNAGDEETNGETLVDELGSTLIKKGFNYHGLEVLYSGVYGTELTCEI 1018
Query: 114 FIGPVYYQRLRHMVSDKFQVRSTGTVDQITRQPIGGRK 1
FIGPVYYQRLRHMVSDK+QVRSTGTVDQ+TRQPI GRK
Sbjct: 1019 FIGPVYYQRLRHMVSDKYQVRSTGTVDQVTRQPIKGRK 1056