BLASTX nr result

ID: Zingiber24_contig00048861 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00048861
         (255 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006645108.1| PREDICTED: RNA-binding protein 24-B-like iso...    71   1e-10
ref|XP_006645107.1| PREDICTED: RNA-binding protein 24-B-like iso...    71   1e-10
ref|NP_001044971.2| Os01g0876800 [Oryza sativa Japonica Group] g...    71   1e-10
dbj|BAD81881.1| putative RRM-containing protein SEB-4 [Oryza sat...    71   1e-10
ref|XP_004970767.1| PREDICTED: RNA-binding protein 24-B-like iso...    70   2e-10
ref|XP_004970766.1| PREDICTED: RNA-binding protein 24-B-like iso...    70   2e-10
gb|EMT32381.1| RNA-binding protein 24-B [Aegilops tauschii]            70   2e-10
gb|EMS52416.1| RNA-binding protein 24-B [Triticum urartu]              70   2e-10
tpg|DAA56566.1| TPA: hypothetical protein ZEAMMB73_877814 [Zea m...    70   2e-10
tpg|DAA56565.1| TPA: hypothetical protein ZEAMMB73_877814 [Zea m...    70   2e-10
tpg|DAA56564.1| TPA: hypothetical protein ZEAMMB73_877814 [Zea m...    70   2e-10
gb|AFW84413.1| hypothetical protein ZEAMMB73_895673 [Zea mays]         70   2e-10
gb|AFW84412.1| hypothetical protein ZEAMMB73_895673 [Zea mays]         70   2e-10
ref|XP_003564757.1| PREDICTED: uncharacterized protein LOC100841...    70   2e-10
ref|XP_003564756.1| PREDICTED: uncharacterized protein LOC100841...    70   2e-10
dbj|BAK00568.1| predicted protein [Hordeum vulgare subsp. vulgare]     70   2e-10
ref|XP_002456729.1| hypothetical protein SORBIDRAFT_03g041530 [S...    70   2e-10
gb|AFW84411.1| hypothetical protein ZEAMMB73_895673 [Zea mays]         70   2e-10
ref|XP_006591951.1| PREDICTED: RNA-binding protein 24-like isofo...    70   4e-10
ref|XP_006587725.1| PREDICTED: RNA-binding protein 24-like isofo...    70   4e-10

>ref|XP_006645108.1| PREDICTED: RNA-binding protein 24-B-like isoform X2 [Oryza
           brachyantha]
          Length = 267

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 29/36 (80%), Positives = 35/36 (97%)
 Frame = -2

Query: 110 PNLVGQFGDTTFTKIFVGGLAWETKSETMRKYFEQF 3
           P+++GQFGDTT+TK+FVGGLAWET+ ETMRKYFEQF
Sbjct: 4   PSVIGQFGDTTYTKVFVGGLAWETQKETMRKYFEQF 39


>ref|XP_006645107.1| PREDICTED: RNA-binding protein 24-B-like isoform X1 [Oryza
           brachyantha]
          Length = 298

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 29/36 (80%), Positives = 35/36 (97%)
 Frame = -2

Query: 110 PNLVGQFGDTTFTKIFVGGLAWETKSETMRKYFEQF 3
           P+++GQFGDTT+TK+FVGGLAWET+ ETMRKYFEQF
Sbjct: 4   PSVIGQFGDTTYTKVFVGGLAWETQKETMRKYFEQF 39


>ref|NP_001044971.2| Os01g0876800 [Oryza sativa Japonica Group]
           gi|255673919|dbj|BAF06885.2| Os01g0876800 [Oryza sativa
           Japonica Group]
          Length = 62

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 29/36 (80%), Positives = 35/36 (97%)
 Frame = -2

Query: 110 PNLVGQFGDTTFTKIFVGGLAWETKSETMRKYFEQF 3
           P+++GQFGDTT+TK+FVGGLAWET+ ETMRKYFEQF
Sbjct: 4   PSVIGQFGDTTYTKVFVGGLAWETQKETMRKYFEQF 39


>dbj|BAD81881.1| putative RRM-containing protein SEB-4 [Oryza sativa Japonica Group]
           gi|56784856|dbj|BAD82096.1| putative RRM-containing
           protein SEB-4 [Oryza sativa Japonica Group]
           gi|125528575|gb|EAY76689.1| hypothetical protein
           OsI_04643 [Oryza sativa Indica Group]
           gi|125572838|gb|EAZ14353.1| hypothetical protein
           OsJ_04273 [Oryza sativa Japonica Group]
          Length = 300

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 29/36 (80%), Positives = 35/36 (97%)
 Frame = -2

Query: 110 PNLVGQFGDTTFTKIFVGGLAWETKSETMRKYFEQF 3
           P+++GQFGDTT+TK+FVGGLAWET+ ETMRKYFEQF
Sbjct: 4   PSVIGQFGDTTYTKVFVGGLAWETQKETMRKYFEQF 39


>ref|XP_004970767.1| PREDICTED: RNA-binding protein 24-B-like isoform X2 [Setaria
           italica]
          Length = 263

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 29/36 (80%), Positives = 35/36 (97%)
 Frame = -2

Query: 110 PNLVGQFGDTTFTKIFVGGLAWETKSETMRKYFEQF 3
           P+++GQFGDTT+TK+FVGGLAWET+ ETMRKYFEQF
Sbjct: 4   PSVMGQFGDTTYTKVFVGGLAWETQKETMRKYFEQF 39


>ref|XP_004970766.1| PREDICTED: RNA-binding protein 24-B-like isoform X1 [Setaria
           italica]
          Length = 294

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 29/36 (80%), Positives = 35/36 (97%)
 Frame = -2

Query: 110 PNLVGQFGDTTFTKIFVGGLAWETKSETMRKYFEQF 3
           P+++GQFGDTT+TK+FVGGLAWET+ ETMRKYFEQF
Sbjct: 4   PSVMGQFGDTTYTKVFVGGLAWETQKETMRKYFEQF 39


>gb|EMT32381.1| RNA-binding protein 24-B [Aegilops tauschii]
          Length = 168

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 29/36 (80%), Positives = 35/36 (97%)
 Frame = -2

Query: 110 PNLVGQFGDTTFTKIFVGGLAWETKSETMRKYFEQF 3
           P+++GQFGDTT+TK+FVGGLAWET+ ETMRKYFEQF
Sbjct: 4   PSVMGQFGDTTYTKVFVGGLAWETQKETMRKYFEQF 39


>gb|EMS52416.1| RNA-binding protein 24-B [Triticum urartu]
          Length = 297

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 29/36 (80%), Positives = 35/36 (97%)
 Frame = -2

Query: 110 PNLVGQFGDTTFTKIFVGGLAWETKSETMRKYFEQF 3
           P+++GQFGDTT+TK+FVGGLAWET+ ETMRKYFEQF
Sbjct: 4   PSVMGQFGDTTYTKVFVGGLAWETQKETMRKYFEQF 39


>tpg|DAA56566.1| TPA: hypothetical protein ZEAMMB73_877814 [Zea mays]
          Length = 264

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 29/36 (80%), Positives = 35/36 (97%)
 Frame = -2

Query: 110 PNLVGQFGDTTFTKIFVGGLAWETKSETMRKYFEQF 3
           P+++GQFGDTT+TK+FVGGLAWET+ ETMRKYFEQF
Sbjct: 4   PSVMGQFGDTTYTKVFVGGLAWETQKETMRKYFEQF 39


>tpg|DAA56565.1| TPA: hypothetical protein ZEAMMB73_877814 [Zea mays]
          Length = 295

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 29/36 (80%), Positives = 35/36 (97%)
 Frame = -2

Query: 110 PNLVGQFGDTTFTKIFVGGLAWETKSETMRKYFEQF 3
           P+++GQFGDTT+TK+FVGGLAWET+ ETMRKYFEQF
Sbjct: 4   PSVMGQFGDTTYTKVFVGGLAWETQKETMRKYFEQF 39


>tpg|DAA56564.1| TPA: hypothetical protein ZEAMMB73_877814 [Zea mays]
          Length = 170

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 29/36 (80%), Positives = 35/36 (97%)
 Frame = -2

Query: 110 PNLVGQFGDTTFTKIFVGGLAWETKSETMRKYFEQF 3
           P+++GQFGDTT+TK+FVGGLAWET+ ETMRKYFEQF
Sbjct: 4   PSVMGQFGDTTYTKVFVGGLAWETQKETMRKYFEQF 39


>gb|AFW84413.1| hypothetical protein ZEAMMB73_895673 [Zea mays]
          Length = 262

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 29/36 (80%), Positives = 35/36 (97%)
 Frame = -2

Query: 110 PNLVGQFGDTTFTKIFVGGLAWETKSETMRKYFEQF 3
           P+++GQFGDTT+TK+FVGGLAWET+ ETMRKYFEQF
Sbjct: 4   PSVMGQFGDTTYTKVFVGGLAWETQKETMRKYFEQF 39


>gb|AFW84412.1| hypothetical protein ZEAMMB73_895673 [Zea mays]
          Length = 290

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 29/36 (80%), Positives = 35/36 (97%)
 Frame = -2

Query: 110 PNLVGQFGDTTFTKIFVGGLAWETKSETMRKYFEQF 3
           P+++GQFGDTT+TK+FVGGLAWET+ ETMRKYFEQF
Sbjct: 4   PSVMGQFGDTTYTKVFVGGLAWETQKETMRKYFEQF 39


>ref|XP_003564757.1| PREDICTED: uncharacterized protein LOC100841513 isoform 2
           [Brachypodium distachyon]
          Length = 293

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 29/36 (80%), Positives = 35/36 (97%)
 Frame = -2

Query: 110 PNLVGQFGDTTFTKIFVGGLAWETKSETMRKYFEQF 3
           P+++GQFGDTT+TK+FVGGLAWET+ ETMRKYFEQF
Sbjct: 4   PSVMGQFGDTTYTKVFVGGLAWETQKETMRKYFEQF 39


>ref|XP_003564756.1| PREDICTED: uncharacterized protein LOC100841513 isoform 1
           [Brachypodium distachyon]
          Length = 262

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 29/36 (80%), Positives = 35/36 (97%)
 Frame = -2

Query: 110 PNLVGQFGDTTFTKIFVGGLAWETKSETMRKYFEQF 3
           P+++GQFGDTT+TK+FVGGLAWET+ ETMRKYFEQF
Sbjct: 4   PSVMGQFGDTTYTKVFVGGLAWETQKETMRKYFEQF 39


>dbj|BAK00568.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 265

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 29/36 (80%), Positives = 35/36 (97%)
 Frame = -2

Query: 110 PNLVGQFGDTTFTKIFVGGLAWETKSETMRKYFEQF 3
           P+++GQFGDTT+TK+FVGGLAWET+ ETMRKYFEQF
Sbjct: 4   PSVMGQFGDTTYTKVFVGGLAWETQKETMRKYFEQF 39


>ref|XP_002456729.1| hypothetical protein SORBIDRAFT_03g041530 [Sorghum bicolor]
           gi|241928704|gb|EES01849.1| hypothetical protein
           SORBIDRAFT_03g041530 [Sorghum bicolor]
          Length = 262

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 29/36 (80%), Positives = 35/36 (97%)
 Frame = -2

Query: 110 PNLVGQFGDTTFTKIFVGGLAWETKSETMRKYFEQF 3
           P+++GQFGDTT+TK+FVGGLAWET+ ETMRKYFEQF
Sbjct: 4   PSVMGQFGDTTYTKVFVGGLAWETQKETMRKYFEQF 39


>gb|AFW84411.1| hypothetical protein ZEAMMB73_895673 [Zea mays]
          Length = 106

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 29/36 (80%), Positives = 35/36 (97%)
 Frame = -2

Query: 110 PNLVGQFGDTTFTKIFVGGLAWETKSETMRKYFEQF 3
           P+++GQFGDTT+TK+FVGGLAWET+ ETMRKYFEQF
Sbjct: 4   PSVMGQFGDTTYTKVFVGGLAWETQKETMRKYFEQF 39


>ref|XP_006591951.1| PREDICTED: RNA-binding protein 24-like isoform X2 [Glycine max]
          Length = 272

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 31/39 (79%), Positives = 36/39 (92%), Gaps = 1/39 (2%)
 Frame = -2

Query: 116 MSP-NLVGQFGDTTFTKIFVGGLAWETKSETMRKYFEQF 3
           M+P NL GQFGDTT+TK+FVGGLAWET+ ETM+KYFEQF
Sbjct: 1   MTPVNLAGQFGDTTYTKVFVGGLAWETQKETMKKYFEQF 39


>ref|XP_006587725.1| PREDICTED: RNA-binding protein 24-like isoform X2 [Glycine max]
          Length = 272

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 31/39 (79%), Positives = 36/39 (92%), Gaps = 1/39 (2%)
 Frame = -2

Query: 116 MSP-NLVGQFGDTTFTKIFVGGLAWETKSETMRKYFEQF 3
           M+P NL GQFGDTT+TK+FVGGLAWET+ ETM+KYFEQF
Sbjct: 1   MTPVNLAGQFGDTTYTKVFVGGLAWETQKETMKKYFEQF 39


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