BLASTX nr result
ID: Zingiber24_contig00048810
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00048810
(295 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004986615.1| PREDICTED: pentatricopeptide repeat-containi... 99 6e-19
gb|EMT32379.1| Pentatricopeptide repeat-containing protein [Aegi... 97 3e-18
ref|XP_003567327.1| PREDICTED: pentatricopeptide repeat-containi... 96 5e-18
ref|NP_001159257.1| hypothetical protein [Zea mays] gi|223943049... 96 5e-18
ref|XP_006661785.1| PREDICTED: pentatricopeptide repeat-containi... 95 9e-18
gb|ABB47633.1| expressed protein [Oryza sativa Japonica Group] 91 2e-16
gb|EEE50978.1| hypothetical protein OsJ_31562 [Oryza sativa Japo... 91 2e-16
gb|EEC66969.1| hypothetical protein OsI_33629 [Oryza sativa Indi... 91 2e-16
gb|ESW27283.1| hypothetical protein PHAVU_003G188300g [Phaseolus... 86 4e-15
ref|XP_004508741.1| PREDICTED: pentatricopeptide repeat-containi... 84 2e-14
ref|XP_003631269.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 82 7e-14
emb|CBI28530.3| unnamed protein product [Vitis vinifera] 82 7e-14
gb|EXB38552.1| hypothetical protein L484_008580 [Morus notabilis] 82 1e-13
gb|EMJ11418.1| hypothetical protein PRUPE_ppa015814mg [Prunus pe... 82 1e-13
ref|XP_002318601.2| hypothetical protein POPTR_0012s07030g, part... 81 1e-13
ref|NP_200945.1| pentatricopeptide repeat-containing protein [Ar... 81 1e-13
gb|AAM65325.1| unknown [Arabidopsis thaliana] 81 1e-13
ref|XP_006280363.1| hypothetical protein CARUB_v10026291mg [Caps... 80 2e-13
ref|XP_002866430.1| hypothetical protein ARALYDRAFT_496296 [Arab... 80 2e-13
gb|EOY21933.1| Pentatricopeptide repeat superfamily protein [The... 80 4e-13
>ref|XP_004986615.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61370,
mitochondrial-like [Setaria italica]
Length = 670
Score = 99.0 bits (245), Expect = 6e-19
Identities = 46/86 (53%), Positives = 61/86 (70%)
Frame = -3
Query: 293 ARGVVWRHRRNLLSGGGEATRIIQQSLLHGWCVRGDVKEARHVMDEMKSLGFPPTIASYN 114
A+GVVW H+ L I+++SLLHGWCV G+ KEAR V+DEMKS G P + S+N
Sbjct: 202 AQGVVWHHKSEL--SVEPMVSIVERSLLHGWCVHGNAKEARRVLDEMKSAGVPLGLPSFN 259
Query: 113 DLLLCLCKKNVKSNPSALVPEATNLM 36
D L C+C +N+K NPSALVPEA +++
Sbjct: 260 DFLHCVCHRNLKFNPSALVPEAMDIL 285
>gb|EMT32379.1| Pentatricopeptide repeat-containing protein [Aegilops tauschii]
Length = 706
Score = 96.7 bits (239), Expect = 3e-18
Identities = 45/87 (51%), Positives = 61/87 (70%)
Frame = -3
Query: 293 ARGVVWRHRRNLLSGGGEATRIIQQSLLHGWCVRGDVKEARHVMDEMKSLGFPPTIASYN 114
A+GVVW H+ L I+Q+SLLHGWCV G+ KEAR V+D++KS G P + S+N
Sbjct: 211 AQGVVWHHKSEL--SAEPMVSIVQRSLLHGWCVHGNAKEARRVLDDIKSSGCPLGLPSFN 268
Query: 113 DLLLCLCKKNVKSNPSALVPEATNLMT 33
D L C+C +N+K NPSALV EA +++T
Sbjct: 269 DFLNCVCHRNLKFNPSALVSEAMDILT 295
>ref|XP_003567327.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61370,
mitochondrial-like [Brachypodium distachyon]
Length = 676
Score = 95.9 bits (237), Expect = 5e-18
Identities = 44/87 (50%), Positives = 61/87 (70%)
Frame = -3
Query: 293 ARGVVWRHRRNLLSGGGEATRIIQQSLLHGWCVRGDVKEARHVMDEMKSLGFPPTIASYN 114
A+GVVW H+ L I+Q++LLHGWCV G+ KEAR V+D++KS G P + S+N
Sbjct: 209 AQGVVWHHKSEL--SAEPMVSIVQRTLLHGWCVHGNAKEARRVLDDIKSSGCPVGLPSFN 266
Query: 113 DLLLCLCKKNVKSNPSALVPEATNLMT 33
D L C+C +N+K N SALVPEA +++T
Sbjct: 267 DFLNCVCHRNLKFNASALVPEAMDILT 293
>ref|NP_001159257.1| hypothetical protein [Zea mays] gi|223943049|gb|ACN25608.1| unknown
[Zea mays] gi|223944973|gb|ACN26570.1| unknown [Zea
mays] gi|414871380|tpg|DAA49937.1| TPA: hypothetical
protein ZEAMMB73_156182 [Zea mays]
gi|414871381|tpg|DAA49938.1| TPA: hypothetical protein
ZEAMMB73_156182 [Zea mays]
Length = 499
Score = 95.9 bits (237), Expect = 5e-18
Identities = 44/87 (50%), Positives = 61/87 (70%)
Frame = -3
Query: 293 ARGVVWRHRRNLLSGGGEATRIIQQSLLHGWCVRGDVKEARHVMDEMKSLGFPPTIASYN 114
A+GVVW H+ L I+++SLLHGWCV G+ KEAR V++EMKS G P + S+N
Sbjct: 207 AQGVVWHHKSEL--SAEPMVSIVERSLLHGWCVHGNAKEARKVLNEMKSSGVPLGLPSFN 264
Query: 113 DLLLCLCKKNVKSNPSALVPEATNLMT 33
+ L C+C +N+ NPSALVPEA +++T
Sbjct: 265 EFLHCVCHRNLNFNPSALVPEAMDILT 291
>ref|XP_006661785.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61370,
mitochondrial-like [Oryza brachyantha]
Length = 666
Score = 95.1 bits (235), Expect = 9e-18
Identities = 45/86 (52%), Positives = 61/86 (70%)
Frame = -3
Query: 293 ARGVVWRHRRNLLSGGGEATRIIQQSLLHGWCVRGDVKEARHVMDEMKSLGFPPTIASYN 114
A+GVVW H+R L I+Q+SLLHGWCV G+ KEAR V+D++KS P + S+N
Sbjct: 198 AQGVVWHHKREL--SVEPMVSIVQRSLLHGWCVHGNAKEARRVLDDIKSSCSPLGLPSFN 255
Query: 113 DLLLCLCKKNVKSNPSALVPEATNLM 36
D + CLC +N+K NPSALVPEA +++
Sbjct: 256 DYMHCLCHRNLKFNPSALVPEAMDVL 281
>gb|ABB47633.1| expressed protein [Oryza sativa Japonica Group]
Length = 658
Score = 90.9 bits (224), Expect = 2e-16
Identities = 44/87 (50%), Positives = 60/87 (68%)
Frame = -3
Query: 293 ARGVVWRHRRNLLSGGGEATRIIQQSLLHGWCVRGDVKEARHVMDEMKSLGFPPTIASYN 114
A+GVVW H+ L I+Q+SLLHGWCV G+ KEAR V+D++KS P + S+N
Sbjct: 190 AQGVVWHHKSEL--SVEPMVSIVQRSLLHGWCVHGNAKEARRVLDDIKSSCTPLGLPSFN 247
Query: 113 DLLLCLCKKNVKSNPSALVPEATNLMT 33
D L CLC +N+K NPSALV EA ++++
Sbjct: 248 DYLHCLCHRNLKFNPSALVTEAMDVLS 274
>gb|EEE50978.1| hypothetical protein OsJ_31562 [Oryza sativa Japonica Group]
Length = 648
Score = 90.9 bits (224), Expect = 2e-16
Identities = 44/87 (50%), Positives = 60/87 (68%)
Frame = -3
Query: 293 ARGVVWRHRRNLLSGGGEATRIIQQSLLHGWCVRGDVKEARHVMDEMKSLGFPPTIASYN 114
A+GVVW H+ L I+Q+SLLHGWCV G+ KEAR V+D++KS P + S+N
Sbjct: 190 AQGVVWHHKSEL--SVEPMVSIVQRSLLHGWCVHGNAKEARRVLDDIKSSCTPLGLPSFN 247
Query: 113 DLLLCLCKKNVKSNPSALVPEATNLMT 33
D L CLC +N+K NPSALV EA ++++
Sbjct: 248 DYLHCLCHRNLKFNPSALVTEAMDVLS 274
>gb|EEC66969.1| hypothetical protein OsI_33629 [Oryza sativa Indica Group]
Length = 648
Score = 90.9 bits (224), Expect = 2e-16
Identities = 44/87 (50%), Positives = 60/87 (68%)
Frame = -3
Query: 293 ARGVVWRHRRNLLSGGGEATRIIQQSLLHGWCVRGDVKEARHVMDEMKSLGFPPTIASYN 114
A+GVVW H+ L I+Q+SLLHGWCV G+ KEAR V+D++KS P + S+N
Sbjct: 190 AQGVVWHHKSEL--SVEPMVSIVQRSLLHGWCVHGNAKEARRVLDDIKSSCTPLGLPSFN 247
Query: 113 DLLLCLCKKNVKSNPSALVPEATNLMT 33
D L CLC +N+K NPSALV EA ++++
Sbjct: 248 DYLHCLCHRNLKFNPSALVTEAMDVLS 274
>gb|ESW27283.1| hypothetical protein PHAVU_003G188300g [Phaseolus vulgaris]
Length = 494
Score = 86.3 bits (212), Expect = 4e-15
Identities = 42/86 (48%), Positives = 56/86 (65%)
Frame = -3
Query: 293 ARGVVWRHRRNLLSGGGEATRIIQQSLLHGWCVRGDVKEARHVMDEMKSLGFPPTIASYN 114
A GVVW HR + A I +SLL+GW V+ +VKEAR ++ EMK+ G P + YN
Sbjct: 201 AEGVVWHHRDKITG----AKPCIYRSLLYGWSVQRNVKEARRIIKEMKANGVTPDLLCYN 256
Query: 113 DLLLCLCKKNVKSNPSALVPEATNLM 36
L CLC++N++ NPS LVPEA N+M
Sbjct: 257 TFLRCLCERNLRHNPSGLVPEALNVM 282
>ref|XP_004508741.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690-like
[Cicer arietinum]
Length = 1253
Score = 84.3 bits (207), Expect = 2e-14
Identities = 41/86 (47%), Positives = 55/86 (63%)
Frame = -3
Query: 293 ARGVVWRHRRNLLSGGGEATRIIQQSLLHGWCVRGDVKEARHVMDEMKSLGFPPTIASYN 114
A GVVW H+ + I +SLL+GW V+ +VKEAR ++ EMKS G P + YN
Sbjct: 958 AEGVVWHHKDKVKG----VLPCIYRSLLYGWSVQRNVKEARRIIQEMKSNGVNPDLVCYN 1013
Query: 113 DLLLCLCKKNVKSNPSALVPEATNLM 36
L CLC++N++ NPS LVPEA N+M
Sbjct: 1014 TFLRCLCERNLRHNPSGLVPEALNVM 1039
>ref|XP_003631269.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g61370, mitochondrial-like [Vitis vinifera]
Length = 505
Score = 82.0 bits (201), Expect = 7e-14
Identities = 41/86 (47%), Positives = 55/86 (63%)
Frame = -3
Query: 293 ARGVVWRHRRNLLSGGGEATRIIQQSLLHGWCVRGDVKEARHVMDEMKSLGFPPTIASYN 114
A GVV H+ +L I +SL +GW + +VKEAR ++ EMKS+G P + YN
Sbjct: 195 AEGVVRHHKDKILG----VKPCIYRSLFYGWSEQKNVKEARRILKEMKSVGIMPDLFCYN 250
Query: 113 DLLLCLCKKNVKSNPSALVPEATNLM 36
L CLC++N+KSNPS LVPEA N+M
Sbjct: 251 TFLRCLCERNLKSNPSGLVPEALNVM 276
>emb|CBI28530.3| unnamed protein product [Vitis vinifera]
Length = 452
Score = 82.0 bits (201), Expect = 7e-14
Identities = 41/86 (47%), Positives = 55/86 (63%)
Frame = -3
Query: 293 ARGVVWRHRRNLLSGGGEATRIIQQSLLHGWCVRGDVKEARHVMDEMKSLGFPPTIASYN 114
A GVV H+ +L I +SL +GW + +VKEAR ++ EMKS+G P + YN
Sbjct: 164 AEGVVRHHKDKILG----VKPCIYRSLFYGWSEQKNVKEARRILKEMKSVGIMPDLFCYN 219
Query: 113 DLLLCLCKKNVKSNPSALVPEATNLM 36
L CLC++N+KSNPS LVPEA N+M
Sbjct: 220 TFLRCLCERNLKSNPSGLVPEALNVM 245
>gb|EXB38552.1| hypothetical protein L484_008580 [Morus notabilis]
Length = 518
Score = 81.6 bits (200), Expect = 1e-13
Identities = 43/86 (50%), Positives = 57/86 (66%)
Frame = -3
Query: 293 ARGVVWRHRRNLLSGGGEATRIIQQSLLHGWCVRGDVKEARHVMDEMKSLGFPPTIASYN 114
A GVV H+ + +SG R I +SLL+GW + +VKEAR ++ EMKS G P + YN
Sbjct: 194 AEGVVGHHK-DRISG---MERCIYRSLLYGWSEQENVKEARRIIKEMKSAGINPDLFCYN 249
Query: 113 DLLLCLCKKNVKSNPSALVPEATNLM 36
L CLC++N+K NPS LVPEA N+M
Sbjct: 250 TFLRCLCERNLKRNPSGLVPEALNVM 275
>gb|EMJ11418.1| hypothetical protein PRUPE_ppa015814mg [Prunus persica]
Length = 524
Score = 81.6 bits (200), Expect = 1e-13
Identities = 42/86 (48%), Positives = 52/86 (60%)
Frame = -3
Query: 293 ARGVVWRHRRNLLSGGGEATRIIQQSLLHGWCVRGDVKEARHVMDEMKSLGFPPTIASYN 114
A GVVW HR + I +SLL+GW V+ +VKE R ++ EMKS G P + YN
Sbjct: 163 AEGVVWHHRDKIAG----IEPCIYKSLLYGWSVQENVKEERRIIKEMKSAGIMPDLFCYN 218
Query: 113 DLLLCLCKKNVKSNPSALVPEATNLM 36
L LC KN+K NPS LVPEA N+M
Sbjct: 219 TFLRSLCMKNLKCNPSGLVPEALNVM 244
>ref|XP_002318601.2| hypothetical protein POPTR_0012s07030g, partial [Populus
trichocarpa] gi|550326549|gb|EEE96821.2| hypothetical
protein POPTR_0012s07030g, partial [Populus trichocarpa]
Length = 410
Score = 81.3 bits (199), Expect = 1e-13
Identities = 40/86 (46%), Positives = 56/86 (65%)
Frame = -3
Query: 293 ARGVVWRHRRNLLSGGGEATRIIQQSLLHGWCVRGDVKEARHVMDEMKSLGFPPTIASYN 114
A+GV H+ N +SG ++ + LL+GW V+ +VKEAR ++ EMK G P + YN
Sbjct: 154 AQGVFSHHKNNKISGLEPC--VVYRCLLYGWSVQENVKEARKIIQEMKGDGLIPDLFCYN 211
Query: 113 DLLLCLCKKNVKSNPSALVPEATNLM 36
L CLC++N+K NPS LVPEA N+M
Sbjct: 212 TFLKCLCERNLKRNPSGLVPEALNVM 237
>ref|NP_200945.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171474|sp|Q9FLJ6.1|PP439_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g61370, mitochondrial; Flags: Precursor
gi|9757858|dbj|BAB08492.1| unnamed protein product
[Arabidopsis thaliana] gi|17529064|gb|AAL38742.1|
unknown protein [Arabidopsis thaliana]
gi|23296891|gb|AAN13197.1| unknown protein [Arabidopsis
thaliana] gi|332010076|gb|AED97459.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 487
Score = 81.3 bits (199), Expect = 1e-13
Identities = 39/82 (47%), Positives = 55/82 (67%)
Frame = -3
Query: 281 VWRHRRNLLSGGGEATRIIQQSLLHGWCVRGDVKEARHVMDEMKSLGFPPTIASYNDLLL 102
V H ++++SG + + +SLL GW V+ +VKEAR V+ +MKS G P + +N LL
Sbjct: 195 VMHHHKDVISGNELS---VYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLT 251
Query: 101 CLCKKNVKSNPSALVPEATNLM 36
CLC++NV NPS LVPEA N+M
Sbjct: 252 CLCERNVNRNPSGLVPEALNIM 273
>gb|AAM65325.1| unknown [Arabidopsis thaliana]
Length = 487
Score = 81.3 bits (199), Expect = 1e-13
Identities = 39/82 (47%), Positives = 55/82 (67%)
Frame = -3
Query: 281 VWRHRRNLLSGGGEATRIIQQSLLHGWCVRGDVKEARHVMDEMKSLGFPPTIASYNDLLL 102
V H ++++SG + + +SLL GW V+ +VKEAR V+ +MKS G P + +N LL
Sbjct: 195 VMHHHKDVISGNELS---VYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLT 251
Query: 101 CLCKKNVKSNPSALVPEATNLM 36
CLC++NV NPS LVPEA N+M
Sbjct: 252 CLCERNVNRNPSGLVPEALNIM 273
>ref|XP_006280363.1| hypothetical protein CARUB_v10026291mg [Capsella rubella]
gi|482549067|gb|EOA13261.1| hypothetical protein
CARUB_v10026291mg [Capsella rubella]
Length = 490
Score = 80.5 bits (197), Expect = 2e-13
Identities = 39/82 (47%), Positives = 54/82 (65%)
Frame = -3
Query: 281 VWRHRRNLLSGGGEATRIIQQSLLHGWCVRGDVKEARHVMDEMKSLGFPPTIASYNDLLL 102
V H ++ +SG + + +SLL GW V+ +VKEAR V+ +MKS G P + +N LL
Sbjct: 198 VMHHHKDAISGNELS---VYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLT 254
Query: 101 CLCKKNVKSNPSALVPEATNLM 36
CLC++NV NPS LVPEA N+M
Sbjct: 255 CLCERNVNRNPSGLVPEALNIM 276
>ref|XP_002866430.1| hypothetical protein ARALYDRAFT_496296 [Arabidopsis lyrata subsp.
lyrata] gi|297312265|gb|EFH42689.1| hypothetical protein
ARALYDRAFT_496296 [Arabidopsis lyrata subsp. lyrata]
Length = 489
Score = 80.5 bits (197), Expect = 2e-13
Identities = 39/82 (47%), Positives = 54/82 (65%)
Frame = -3
Query: 281 VWRHRRNLLSGGGEATRIIQQSLLHGWCVRGDVKEARHVMDEMKSLGFPPTIASYNDLLL 102
V H ++ +SG + + +SLL GW V+ +VKEAR V+ +MKS G P + +N LL
Sbjct: 197 VMHHHKDAISGNELS---VYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLT 253
Query: 101 CLCKKNVKSNPSALVPEATNLM 36
CLC++NV NPS LVPEA N+M
Sbjct: 254 CLCERNVNRNPSGLVPEALNIM 275
>gb|EOY21933.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
Length = 487
Score = 79.7 bits (195), Expect = 4e-13
Identities = 42/86 (48%), Positives = 52/86 (60%)
Frame = -3
Query: 293 ARGVVWRHRRNLLSGGGEATRIIQQSLLHGWCVRGDVKEARHVMDEMKSLGFPPTIASYN 114
A GVV+ H+ + I + LL+GW V+ +VKEAR V+ EMKS GF + YN
Sbjct: 195 AEGVVYHHKDTIAG----VEPCIYRCLLYGWSVQENVKEARRVIKEMKSAGFELDLYCYN 250
Query: 113 DLLLCLCKKNVKSNPSALVPEATNLM 36
L CLC KN K NPS LVPEA N+M
Sbjct: 251 TFLRCLCGKNAKRNPSGLVPEALNVM 276