BLASTX nr result
ID: Zingiber24_contig00048731
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00048731
(286 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_008854652.1| hypothetical chloroplast RF19 [Curcuma rosco... 148 6e-34
gb|AGE93428.1| hypothetical chloroplast RF19 [Alpinia zerumbet] 144 1e-32
gb|AEX93999.1| hypothetical chloroplast RF19 (chloroplast) [Alli... 142 6e-32
gb|AEK71687.1| hypothetical chloroplast RF1 [Trochodendron arali... 142 6e-32
ref|YP_008081515.1| hypothetical chloroplast RF1 (chloroplast) [... 142 6e-32
ref|YP_001294400.1| hypothetical chloroplast RF1 [Dioscorea elep... 142 6e-32
gb|AHA12982.1| hypothetical chloroplast RF19 [Monocostus uniflorus] 140 1e-31
ref|YP_008854483.1| hypothetical chloroplast RF19 [Musa textilis... 140 1e-31
emb|CCW72425.1| ycf1 (chloroplast) [Musa acuminata subsp. malacc... 140 1e-31
ref|YP_007475677.1| hypothetical chloroplast RF19 [Heliconia col... 140 1e-31
ref|YP_007353973.1| Ycf1 protein (chloroplast) [Tectona grandis]... 140 1e-31
gb|AEX94034.1| hypothetical chloroplast RF19 (chloroplast) [Andr... 140 1e-31
gb|AGS12739.1| Ycf1, partial (chloroplast) [Humiria balsamifera] 140 2e-31
ref|YP_740709.1| hypothetical chloroplast RF1 [Nandina domestica... 140 2e-31
gb|AGL80070.1| Ycf1 (chloroplast) [Fritillaria taipaiensis] 139 3e-31
ref|YP_008994130.1| photosystem I assembly protein Ycf1 (chlorop... 139 3e-31
ref|YP_008081412.1| hypothetical chloroplast RF1 (chloroplast) [... 139 3e-31
ref|YP_008081424.1| hypothetical chloroplast RF1 (chloroplast) [... 139 3e-31
ref|YP_007890432.1| hypothetical chloroplast RF1 (chloroplast) [... 139 3e-31
gb|AGE93514.1| hypothetical chloroplast RF19 [Xiphidium caeruleum] 139 3e-31
>ref|YP_008854652.1| hypothetical chloroplast RF19 [Curcuma roscoeana]
gi|557637559|gb|AHA13154.1| hypothetical chloroplast
RF19 [Curcuma roscoeana]
Length = 1815
Score = 148 bits (374), Expect = 6e-34
Identities = 78/93 (83%), Positives = 79/93 (84%)
Frame = -2
Query: 279 MIFKSFLLGNLLSSCIKIINSVVLVGLYYGFLTTFSIGPSYLFLLRARXXXXXXXXXXXX 100
MIFKSFLLGNLLSSC+KIINSVVLVGLYYGFLTTFSIGPSYLFLLRAR
Sbjct: 1 MIFKSFLLGNLLSSCMKIINSVVLVGLYYGFLTTFSIGPSYLFLLRARAMEGGTEEEVAA 60
Query: 99 XXGFIMGQLLMFISIYYAPLHLALGRPHTITVL 1
GFIMGQLLMFISIYYAPLHLALGRPHTITVL
Sbjct: 61 TTGFIMGQLLMFISIYYAPLHLALGRPHTITVL 93
>gb|AGE93428.1| hypothetical chloroplast RF19 [Alpinia zerumbet]
Length = 1795
Score = 144 bits (363), Expect = 1e-32
Identities = 76/93 (81%), Positives = 77/93 (82%)
Frame = -2
Query: 279 MIFKSFLLGNLLSSCIKIINSVVLVGLYYGFLTTFSIGPSYLFLLRARXXXXXXXXXXXX 100
MIFKSFLLGNLL C+KIINSVVLVGLYYGFLTTFSIGPSYLFLLRAR
Sbjct: 1 MIFKSFLLGNLLPLCMKIINSVVLVGLYYGFLTTFSIGPSYLFLLRARAMEGGTEEEVAA 60
Query: 99 XXGFIMGQLLMFISIYYAPLHLALGRPHTITVL 1
GFIMGQLLMFISIYYAPLHLALGRPHTITVL
Sbjct: 61 TTGFIMGQLLMFISIYYAPLHLALGRPHTITVL 93
>gb|AEX93999.1| hypothetical chloroplast RF19 (chloroplast) [Allium fistulosum]
Length = 1101
Score = 142 bits (357), Expect = 6e-32
Identities = 74/93 (79%), Positives = 77/93 (82%)
Frame = -2
Query: 279 MIFKSFLLGNLLSSCIKIINSVVLVGLYYGFLTTFSIGPSYLFLLRARXXXXXXXXXXXX 100
MIFKSFLLGNLLS C+KIINSVV+VGLYYGFLTTFSIGPSYLFLLRAR
Sbjct: 1 MIFKSFLLGNLLSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKEISA 60
Query: 99 XXGFIMGQLLMFISIYYAPLHLALGRPHTITVL 1
GFI GQL+MFISIYYAPLHLALGRPHTITVL
Sbjct: 61 TTGFITGQLMMFISIYYAPLHLALGRPHTITVL 93
>gb|AEK71687.1| hypothetical chloroplast RF1 [Trochodendron aralioides]
Length = 478
Score = 142 bits (357), Expect = 6e-32
Identities = 74/93 (79%), Positives = 77/93 (82%)
Frame = -2
Query: 279 MIFKSFLLGNLLSSCIKIINSVVLVGLYYGFLTTFSIGPSYLFLLRARXXXXXXXXXXXX 100
MIFKSFLLGNLLS C+KIINSVV+VGLYYGFLTTFSIGPSYLFLLRAR
Sbjct: 1 MIFKSFLLGNLLSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSA 60
Query: 99 XXGFIMGQLLMFISIYYAPLHLALGRPHTITVL 1
GFI GQL+MFISIYYAPLHLALGRPHTITVL
Sbjct: 61 TTGFITGQLMMFISIYYAPLHLALGRPHTITVL 93
>ref|YP_008081515.1| hypothetical chloroplast RF1 (chloroplast) [Trochodendron
aralioides] gi|290489080|gb|ADD30924.1| putative RF1
protein [Trochodendron aralioides]
gi|479279354|gb|AGJ72207.1| hypothetical chloroplast RF1
(chloroplast) [Trochodendron aralioides]
Length = 1896
Score = 142 bits (357), Expect = 6e-32
Identities = 74/93 (79%), Positives = 77/93 (82%)
Frame = -2
Query: 279 MIFKSFLLGNLLSSCIKIINSVVLVGLYYGFLTTFSIGPSYLFLLRARXXXXXXXXXXXX 100
MIFKSFLLGNLLS C+KIINSVV+VGLYYGFLTTFSIGPSYLFLLRAR
Sbjct: 1 MIFKSFLLGNLLSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSA 60
Query: 99 XXGFIMGQLLMFISIYYAPLHLALGRPHTITVL 1
GFI GQL+MFISIYYAPLHLALGRPHTITVL
Sbjct: 61 TTGFITGQLMMFISIYYAPLHLALGRPHTITVL 93
>ref|YP_001294400.1| hypothetical chloroplast RF1 [Dioscorea elephantipes]
gi|182702249|sp|A6MMQ5.1|YCF1_DIOEL RecName:
Full=Putative membrane protein ycf1; Short=RF1
gi|148668093|gb|ABR01477.1| hypothetical chloroplast RF1
[Dioscorea elephantipes]
Length = 1858
Score = 142 bits (357), Expect = 6e-32
Identities = 74/93 (79%), Positives = 77/93 (82%)
Frame = -2
Query: 279 MIFKSFLLGNLLSSCIKIINSVVLVGLYYGFLTTFSIGPSYLFLLRARXXXXXXXXXXXX 100
MIFKSFLLGNLLS CIKIINSVV+VGLYYGFLTTFSIGPSYLFLLRAR
Sbjct: 1 MIFKSFLLGNLLSLCIKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKEVSA 60
Query: 99 XXGFIMGQLLMFISIYYAPLHLALGRPHTITVL 1
GFI GQL+MFISIYYAPLHLALGRPHT+TVL
Sbjct: 61 TTGFITGQLMMFISIYYAPLHLALGRPHTMTVL 93
>gb|AHA12982.1| hypothetical chloroplast RF19 [Monocostus uniflorus]
Length = 1842
Score = 140 bits (354), Expect = 1e-31
Identities = 74/93 (79%), Positives = 76/93 (81%)
Frame = -2
Query: 279 MIFKSFLLGNLLSSCIKIINSVVLVGLYYGFLTTFSIGPSYLFLLRARXXXXXXXXXXXX 100
MI KSFLLGNLLS C+KIINSVVLVGLYYGFLTTFSIGPSYLFLLRAR
Sbjct: 1 MILKSFLLGNLLSLCMKIINSVVLVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKEVSA 60
Query: 99 XXGFIMGQLLMFISIYYAPLHLALGRPHTITVL 1
GFI GQL+MFISIYYAPLHLALGRPHTITVL
Sbjct: 61 TTGFITGQLMMFISIYYAPLHLALGRPHTITVL 93
>ref|YP_008854483.1| hypothetical chloroplast RF19 [Musa textilis]
gi|557636970|gb|AHA12572.1| hypothetical chloroplast
RF19 [Musa textilis]
Length = 1901
Score = 140 bits (354), Expect = 1e-31
Identities = 74/93 (79%), Positives = 76/93 (81%)
Frame = -2
Query: 279 MIFKSFLLGNLLSSCIKIINSVVLVGLYYGFLTTFSIGPSYLFLLRARXXXXXXXXXXXX 100
MIFKSFLLGNLL C+KIINSVVLVGLYYGFLTTFSIGPSYLFLLRAR
Sbjct: 1 MIFKSFLLGNLLYLCMKIINSVVLVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKEVSA 60
Query: 99 XXGFIMGQLLMFISIYYAPLHLALGRPHTITVL 1
GFI GQL+MFISIYYAPLHLALGRPHTITVL
Sbjct: 61 TTGFITGQLMMFISIYYAPLHLALGRPHTITVL 93
>emb|CCW72425.1| ycf1 (chloroplast) [Musa acuminata subsp. malaccensis]
gi|525312519|emb|CCW72440.1| ycf1 (chloroplast) [Musa
acuminata subsp. malaccensis]
Length = 1990
Score = 140 bits (354), Expect = 1e-31
Identities = 74/93 (79%), Positives = 76/93 (81%)
Frame = -2
Query: 279 MIFKSFLLGNLLSSCIKIINSVVLVGLYYGFLTTFSIGPSYLFLLRARXXXXXXXXXXXX 100
MIFKSFLLGNLL C+KIINSVVLVGLYYGFLTTFSIGPSYLFLLRAR
Sbjct: 1 MIFKSFLLGNLLYLCMKIINSVVLVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKEVSA 60
Query: 99 XXGFIMGQLLMFISIYYAPLHLALGRPHTITVL 1
GFI GQL+MFISIYYAPLHLALGRPHTITVL
Sbjct: 61 TTGFITGQLMMFISIYYAPLHLALGRPHTITVL 93
>ref|YP_007475677.1| hypothetical chloroplast RF19 [Heliconia collinsiana]
gi|449326156|gb|AGE92742.1| hypothetical chloroplast
RF19 [Heliconia collinsiana]
Length = 1782
Score = 140 bits (354), Expect = 1e-31
Identities = 74/93 (79%), Positives = 76/93 (81%)
Frame = -2
Query: 279 MIFKSFLLGNLLSSCIKIINSVVLVGLYYGFLTTFSIGPSYLFLLRARXXXXXXXXXXXX 100
MI KSFLLGNLLS C+KIINSVVLVGLYYGFLTTFSIGPSYLFLLRAR
Sbjct: 1 MILKSFLLGNLLSLCMKIINSVVLVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKEVSA 60
Query: 99 XXGFIMGQLLMFISIYYAPLHLALGRPHTITVL 1
GFI GQL+MFISIYYAPLHLALGRPHTITVL
Sbjct: 61 TTGFITGQLMMFISIYYAPLHLALGRPHTITVL 93
>ref|YP_007353973.1| Ycf1 protein (chloroplast) [Tectona grandis]
gi|438687662|emb|CCP47191.1| YCF1 protein (chloroplast)
[Tectona grandis] gi|438688346|emb|CCP47280.1| YCF1
protein (chloroplast) [Tectona grandis]
gi|438688470|emb|CCP47369.1| YCF1 protein (chloroplast)
[Tectona grandis]
Length = 1898
Score = 140 bits (354), Expect = 1e-31
Identities = 73/95 (76%), Positives = 78/95 (82%)
Frame = -2
Query: 285 FVMIFKSFLLGNLLSSCIKIINSVVLVGLYYGFLTTFSIGPSYLFLLRARXXXXXXXXXX 106
FVMIF+SFLLGNL+S C+KIINSVV VGLYYGFLTTFSIGPSYLFLLRA+
Sbjct: 39 FVMIFQSFLLGNLVSLCMKIINSVVAVGLYYGFLTTFSIGPSYLFLLRAQVMEEGTEKKV 98
Query: 105 XXXXGFIMGQLLMFISIYYAPLHLALGRPHTITVL 1
GFI GQL+MFISIYYAPLHLALGRPHTITVL
Sbjct: 99 SATTGFITGQLMMFISIYYAPLHLALGRPHTITVL 133
>gb|AEX94034.1| hypothetical chloroplast RF19 (chloroplast) [Androstephium
coeruleum]
Length = 1805
Score = 140 bits (354), Expect = 1e-31
Identities = 74/93 (79%), Positives = 76/93 (81%)
Frame = -2
Query: 279 MIFKSFLLGNLLSSCIKIINSVVLVGLYYGFLTTFSIGPSYLFLLRARXXXXXXXXXXXX 100
MI KSFLLGNLLS CIKIINSVV+VGLYYGFLTTFSIGPSYLFLLRAR
Sbjct: 1 MILKSFLLGNLLSLCIKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKAVSA 60
Query: 99 XXGFIMGQLLMFISIYYAPLHLALGRPHTITVL 1
GFI GQL+MFISIYYAPLHLALGRPHTITVL
Sbjct: 61 TTGFITGQLMMFISIYYAPLHLALGRPHTITVL 93
>gb|AGS12739.1| Ycf1, partial (chloroplast) [Humiria balsamifera]
Length = 253
Score = 140 bits (352), Expect = 2e-31
Identities = 71/94 (75%), Positives = 78/94 (82%)
Frame = -2
Query: 282 VMIFKSFLLGNLLSSCIKIINSVVLVGLYYGFLTTFSIGPSYLFLLRARXXXXXXXXXXX 103
+MIFKSF+LGNL+S C+KIINSVV+VGLYYGFLTTFS+GPSYLFLLRAR
Sbjct: 1 MMIFKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFSVGPSYLFLLRARVIEEGTEKKVS 60
Query: 102 XXXGFIMGQLLMFISIYYAPLHLALGRPHTITVL 1
GFI GQL+MFISIYYAPLHLALGRPHTITVL
Sbjct: 61 ATTGFITGQLMMFISIYYAPLHLALGRPHTITVL 94
>ref|YP_740709.1| hypothetical chloroplast RF1 [Nandina domestica]
gi|118574757|sp|Q09FQ2.1|YCF1_NANDO RecName:
Full=Putative membrane protein ycf1; Short=RF1
gi|114054530|gb|ABI49923.1| hypothetical chloroplast RF1
[Nandina domestica]
Length = 1843
Score = 140 bits (352), Expect = 2e-31
Identities = 73/93 (78%), Positives = 76/93 (81%)
Frame = -2
Query: 279 MIFKSFLLGNLLSSCIKIINSVVLVGLYYGFLTTFSIGPSYLFLLRARXXXXXXXXXXXX 100
MIF SFLLGNLLS C+KIINSVV+VGLYYGFLTTFSIGPSYLFLLRAR
Sbjct: 1 MIFNSFLLGNLLSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKEVSA 60
Query: 99 XXGFIMGQLLMFISIYYAPLHLALGRPHTITVL 1
GFI GQL+MFISIYYAPLHLALGRPHTITVL
Sbjct: 61 TTGFITGQLMMFISIYYAPLHLALGRPHTITVL 93
>gb|AGL80070.1| Ycf1 (chloroplast) [Fritillaria taipaiensis]
Length = 420
Score = 139 bits (351), Expect = 3e-31
Identities = 73/93 (78%), Positives = 76/93 (81%)
Frame = -2
Query: 279 MIFKSFLLGNLLSSCIKIINSVVLVGLYYGFLTTFSIGPSYLFLLRARXXXXXXXXXXXX 100
MI KSFLLGNLLS C+KIINSVV+VGLYYGFLTTFSIGPSYLFLLRAR
Sbjct: 1 MILKSFLLGNLLSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKGVSA 60
Query: 99 XXGFIMGQLLMFISIYYAPLHLALGRPHTITVL 1
GFI GQL+MFISIYYAPLHLALGRPHTITVL
Sbjct: 61 TTGFITGQLMMFISIYYAPLHLALGRPHTITVL 93
>ref|YP_008994130.1| photosystem I assembly protein Ycf1 (chloroplast) [Fritillaria
taipaiensis] gi|474452250|gb|AGI51302.1| photosystem I
assembly protein Ycf1 (chloroplast) [Fritillaria
taipaiensis] gi|500050490|gb|AGL80148.1| photosystem I
assembly protein Ycf1 (chloroplast) [Fritillaria
taipaiensis]
Length = 1847
Score = 139 bits (351), Expect = 3e-31
Identities = 73/93 (78%), Positives = 76/93 (81%)
Frame = -2
Query: 279 MIFKSFLLGNLLSSCIKIINSVVLVGLYYGFLTTFSIGPSYLFLLRARXXXXXXXXXXXX 100
MI KSFLLGNLLS C+KIINSVV+VGLYYGFLTTFSIGPSYLFLLRAR
Sbjct: 1 MILKSFLLGNLLSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKGVSA 60
Query: 99 XXGFIMGQLLMFISIYYAPLHLALGRPHTITVL 1
GFI GQL+MFISIYYAPLHLALGRPHTITVL
Sbjct: 61 TTGFITGQLMMFISIYYAPLHLALGRPHTITVL 93
>ref|YP_008081412.1| hypothetical chloroplast RF1 (chloroplast) [Tetracentron sinense]
gi|479279273|gb|AGJ72127.1| hypothetical chloroplast RF1
(chloroplast) [Tetracentron sinense]
Length = 378
Score = 139 bits (351), Expect = 3e-31
Identities = 73/93 (78%), Positives = 76/93 (81%)
Frame = -2
Query: 279 MIFKSFLLGNLLSSCIKIINSVVLVGLYYGFLTTFSIGPSYLFLLRARXXXXXXXXXXXX 100
MI KSFLLGNLLS C+KIINSVV+VGLYYGFLTTFSIGPSYLFLLRAR
Sbjct: 1 MILKSFLLGNLLSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSA 60
Query: 99 XXGFIMGQLLMFISIYYAPLHLALGRPHTITVL 1
GFI GQL+MFISIYYAPLHLALGRPHTITVL
Sbjct: 61 TTGFITGQLMMFISIYYAPLHLALGRPHTITVL 93
>ref|YP_008081424.1| hypothetical chloroplast RF1 (chloroplast) [Tetracentron sinense]
gi|479279261|gb|AGJ72115.1| hypothetical chloroplast RF1
(chloroplast) [Tetracentron sinense]
Length = 1895
Score = 139 bits (351), Expect = 3e-31
Identities = 73/93 (78%), Positives = 76/93 (81%)
Frame = -2
Query: 279 MIFKSFLLGNLLSSCIKIINSVVLVGLYYGFLTTFSIGPSYLFLLRARXXXXXXXXXXXX 100
MI KSFLLGNLLS C+KIINSVV+VGLYYGFLTTFSIGPSYLFLLRAR
Sbjct: 1 MILKSFLLGNLLSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSA 60
Query: 99 XXGFIMGQLLMFISIYYAPLHLALGRPHTITVL 1
GFI GQL+MFISIYYAPLHLALGRPHTITVL
Sbjct: 61 TTGFITGQLMMFISIYYAPLHLALGRPHTITVL 93
>ref|YP_007890432.1| hypothetical chloroplast RF1 (chloroplast) [Ardisia polysticta]
gi|456368029|gb|AGG36943.1| hypothetical chloroplast RF1
(chloroplast) [Ardisia polysticta]
Length = 1861
Score = 139 bits (351), Expect = 3e-31
Identities = 72/93 (77%), Positives = 77/93 (82%)
Frame = -2
Query: 279 MIFKSFLLGNLLSSCIKIINSVVLVGLYYGFLTTFSIGPSYLFLLRARXXXXXXXXXXXX 100
MIFKSFLLGNL+S C+KIINSVV+VGLYYGFLTTFSIGPSYLFLLRA+
Sbjct: 1 MIFKSFLLGNLVSLCLKIINSVVVVGLYYGFLTTFSIGPSYLFLLRAQVMEEGTEKKVSA 60
Query: 99 XXGFIMGQLLMFISIYYAPLHLALGRPHTITVL 1
GFI GQL+MFISIYYAPLHLALGRPHTITVL
Sbjct: 61 TTGFITGQLMMFISIYYAPLHLALGRPHTITVL 93
>gb|AGE93514.1| hypothetical chloroplast RF19 [Xiphidium caeruleum]
Length = 1844
Score = 139 bits (351), Expect = 3e-31
Identities = 73/93 (78%), Positives = 76/93 (81%)
Frame = -2
Query: 279 MIFKSFLLGNLLSSCIKIINSVVLVGLYYGFLTTFSIGPSYLFLLRARXXXXXXXXXXXX 100
MI KSFLLGNLLS C+KIINSVV+VGLYYGFLTTFSIGPSYLFLLRAR
Sbjct: 1 MILKSFLLGNLLSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKEVSA 60
Query: 99 XXGFIMGQLLMFISIYYAPLHLALGRPHTITVL 1
GFI GQL+MFISIYYAPLHLALGRPHTITVL
Sbjct: 61 TTGFITGQLMMFISIYYAPLHLALGRPHTITVL 93