BLASTX nr result
ID: Zingiber24_contig00048720
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00048720
(309 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004981076.1| PREDICTED: pentatricopeptide repeat-containi... 124 1e-26
ref|XP_004981075.1| PREDICTED: pentatricopeptide repeat-containi... 124 1e-26
ref|NP_001043491.2| Os01g0600400 [Oryza sativa Japonica Group] g... 117 2e-24
gb|EEC71020.1| hypothetical protein OsI_02714 [Oryza sativa Indi... 117 2e-24
gb|EEE60281.1| hypothetical protein OsJ_13335 [Oryza sativa Japo... 117 2e-24
gb|EEC76511.1| hypothetical protein OsI_14286 [Oryza sativa Indi... 117 2e-24
gb|ABF99847.1| pentatricopeptide, putative, expressed [Oryza sat... 117 2e-24
ref|NP_001051869.1| Os03g0844000 [Oryza sativa Japonica Group] g... 117 2e-24
ref|XP_002466114.1| hypothetical protein SORBIDRAFT_01g001585 [S... 115 8e-24
ref|XP_002466113.1| hypothetical protein SORBIDRAFT_01g001570 [S... 115 8e-24
ref|XP_006650883.1| PREDICTED: pentatricopeptide repeat-containi... 114 2e-23
gb|AFW67004.1| putative pentatricopeptide repeat family protein ... 113 3e-23
gb|AFW67003.1| putative pentatricopeptide repeat family protein ... 113 3e-23
gb|EMT14400.1| hypothetical protein F775_09464 [Aegilops tauschii] 112 4e-23
gb|EMS46161.1| hypothetical protein TRIUR3_10442 [Triticum urartu] 111 9e-23
ref|XP_003559909.1| PREDICTED: pentatricopeptide repeat-containi... 111 9e-23
gb|EMT28927.1| hypothetical protein F775_10857 [Aegilops tauschii] 111 1e-22
gb|EMT27537.1| Pentatricopeptide repeat-containing protein [Aegi... 110 1e-22
ref|XP_004515183.1| PREDICTED: pentatricopeptide repeat-containi... 110 2e-22
gb|EMS45498.1| hypothetical protein TRIUR3_12201 [Triticum urartu] 110 2e-22
>ref|XP_004981076.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like isoform X2 [Setaria italica]
Length = 681
Score = 124 bits (312), Expect = 1e-26
Identities = 55/103 (53%), Positives = 76/103 (73%)
Frame = -1
Query: 309 EAVDKMLETPCSIPDESTFLGILVACSHVGYVDQAVRYFKLMSDTFNIIPSASHYACMVD 130
EA +M + C PD+STFLG+LV C+H G V + +F+LM D + IIP+ SHYACM+D
Sbjct: 482 EAFSEMCSSGCK-PDDSTFLGVLVGCNHAGLVKEGEMFFRLMIDQYGIIPTPSHYACMID 540
Query: 129 IMGRAGRLEEALDIINQMPFKPDVATWKTLLGSCMMQRSLELG 1
++GR GR +EAL +I +MPF+PDV WKTLL SC + R+L++G
Sbjct: 541 MLGRNGRFDEALGMIEKMPFEPDVLIWKTLLASCKLHRNLDMG 583
>ref|XP_004981075.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like isoform X1 [Setaria italica]
Length = 683
Score = 124 bits (312), Expect = 1e-26
Identities = 55/103 (53%), Positives = 76/103 (73%)
Frame = -1
Query: 309 EAVDKMLETPCSIPDESTFLGILVACSHVGYVDQAVRYFKLMSDTFNIIPSASHYACMVD 130
EA +M + C PD+STFLG+LV C+H G V + +F+LM D + IIP+ SHYACM+D
Sbjct: 482 EAFSEMCSSGCK-PDDSTFLGVLVGCNHAGLVKEGEMFFRLMIDQYGIIPTPSHYACMID 540
Query: 129 IMGRAGRLEEALDIINQMPFKPDVATWKTLLGSCMMQRSLELG 1
++GR GR +EAL +I +MPF+PDV WKTLL SC + R+L++G
Sbjct: 541 MLGRNGRFDEALGMIEKMPFEPDVLIWKTLLASCKLHRNLDMG 583
>ref|NP_001043491.2| Os01g0600400 [Oryza sativa Japonica Group]
gi|53791399|dbj|BAD53436.1| pentatricopeptide (PPR)
repeat-containing protein-like [Oryza sativa Japonica
Group] gi|53793537|dbj|BAD52986.1| pentatricopeptide
(PPR) repeat-containing protein-like [Oryza sativa
Japonica Group] gi|222618803|gb|EEE54935.1| hypothetical
protein OsJ_02490 [Oryza sativa Japonica Group]
gi|255673429|dbj|BAF05405.2| Os01g0600400 [Oryza sativa
Japonica Group]
Length = 348
Score = 117 bits (293), Expect = 2e-24
Identities = 51/102 (50%), Positives = 74/102 (72%)
Frame = -1
Query: 309 EAVDKMLETPCSIPDESTFLGILVACSHVGYVDQAVRYFKLMSDTFNIIPSASHYACMVD 130
EA +M++ ++PDE TF+G+L ACSH G +D+ RYFKL+S + I P+ HYACMVD
Sbjct: 174 EAFQEMIDEG-NVPDEITFVGVLSACSHAGLLDEGRRYFKLLSSVYGITPTLEHYACMVD 232
Query: 129 IMGRAGRLEEALDIINQMPFKPDVATWKTLLGSCMMQRSLEL 4
I+ +AG+L EA +IN+MP PD + WKT+LG+C M ++E+
Sbjct: 233 ILAKAGKLAEAESLINEMPLTPDASLWKTILGACRMHGNIEI 274
>gb|EEC71020.1| hypothetical protein OsI_02714 [Oryza sativa Indica Group]
Length = 825
Score = 117 bits (293), Expect = 2e-24
Identities = 51/102 (50%), Positives = 74/102 (72%)
Frame = -1
Query: 309 EAVDKMLETPCSIPDESTFLGILVACSHVGYVDQAVRYFKLMSDTFNIIPSASHYACMVD 130
EA +M++ ++PDE TF+G+L ACSH G +D+ RYFKL+S + I P+ HYACMVD
Sbjct: 651 EAFQEMIDEG-NVPDEITFVGVLSACSHAGLLDEGRRYFKLLSSVYGITPTLEHYACMVD 709
Query: 129 IMGRAGRLEEALDIINQMPFKPDVATWKTLLGSCMMQRSLEL 4
I+ +AG+L EA +IN+MP PD + WKT+LG+C M ++E+
Sbjct: 710 ILAKAGKLAEAESLINEMPLTPDASLWKTILGACRMHGNIEI 751
>gb|EEE60281.1| hypothetical protein OsJ_13335 [Oryza sativa Japonica Group]
Length = 1135
Score = 117 bits (292), Expect = 2e-24
Identities = 48/90 (53%), Positives = 69/90 (76%)
Frame = -1
Query: 270 PDESTFLGILVACSHVGYVDQAVRYFKLMSDTFNIIPSASHYACMVDIMGRAGRLEEALD 91
PD+STFLG+L+ C+H G V++ +F+LM D ++ P+ SHYACM+D++GR GR +EAL
Sbjct: 511 PDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALR 570
Query: 90 IINQMPFKPDVATWKTLLGSCMMQRSLELG 1
+IN MPF+PD WKTLL SC + R+L++G
Sbjct: 571 MINDMPFEPDALIWKTLLASCKLHRNLDIG 600
>gb|EEC76511.1| hypothetical protein OsI_14286 [Oryza sativa Indica Group]
Length = 656
Score = 117 bits (292), Expect = 2e-24
Identities = 48/90 (53%), Positives = 69/90 (76%)
Frame = -1
Query: 270 PDESTFLGILVACSHVGYVDQAVRYFKLMSDTFNIIPSASHYACMVDIMGRAGRLEEALD 91
PD+STFLG+L+ C+H G V++ +F+LM D ++ P+ SHYACM+D++GR GR +EAL
Sbjct: 465 PDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALR 524
Query: 90 IINQMPFKPDVATWKTLLGSCMMQRSLELG 1
+IN MPF+PD WKTLL SC + R+L++G
Sbjct: 525 MINDMPFEPDALIWKTLLASCKLHRNLDIG 554
>gb|ABF99847.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1221
Score = 117 bits (292), Expect = 2e-24
Identities = 48/90 (53%), Positives = 69/90 (76%)
Frame = -1
Query: 270 PDESTFLGILVACSHVGYVDQAVRYFKLMSDTFNIIPSASHYACMVDIMGRAGRLEEALD 91
PD+STFLG+L+ C+H G V++ +F+LM D ++ P+ SHYACM+D++GR GR +EAL
Sbjct: 438 PDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALR 497
Query: 90 IINQMPFKPDVATWKTLLGSCMMQRSLELG 1
+IN MPF+PD WKTLL SC + R+L++G
Sbjct: 498 MINDMPFEPDALIWKTLLASCKLHRNLDIG 527
>ref|NP_001051869.1| Os03g0844000 [Oryza sativa Japonica Group]
gi|41469627|gb|AAS07350.1| putative pentatricopeptide
repeat domain contianing protein [Oryza sativa Japonica
Group] gi|113550340|dbj|BAF13783.1| Os03g0844000 [Oryza
sativa Japonica Group] gi|215686748|dbj|BAG89598.1|
unnamed protein product [Oryza sativa Japonica Group]
Length = 702
Score = 117 bits (292), Expect = 2e-24
Identities = 48/90 (53%), Positives = 69/90 (76%)
Frame = -1
Query: 270 PDESTFLGILVACSHVGYVDQAVRYFKLMSDTFNIIPSASHYACMVDIMGRAGRLEEALD 91
PD+STFLG+L+ C+H G V++ +F+LM D ++ P+ SHYACM+D++GR GR +EAL
Sbjct: 511 PDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALR 570
Query: 90 IINQMPFKPDVATWKTLLGSCMMQRSLELG 1
+IN MPF+PD WKTLL SC + R+L++G
Sbjct: 571 MINDMPFEPDALIWKTLLASCKLHRNLDIG 600
>ref|XP_002466114.1| hypothetical protein SORBIDRAFT_01g001585 [Sorghum bicolor]
gi|241919968|gb|EER93112.1| hypothetical protein
SORBIDRAFT_01g001585 [Sorghum bicolor]
Length = 627
Score = 115 bits (287), Expect = 8e-24
Identities = 46/90 (51%), Positives = 68/90 (75%)
Frame = -1
Query: 270 PDESTFLGILVACSHVGYVDQAVRYFKLMSDTFNIIPSASHYACMVDIMGRAGRLEEALD 91
PD+STF+ +LV C+H G V + +F+LM+D + + P+ SHYACM+D++GR GR +EAL
Sbjct: 437 PDDSTFIAVLVGCNHAGLVKEGETFFRLMTDRYGLTPTPSHYACMIDMLGRNGRFDEALH 496
Query: 90 IINQMPFKPDVATWKTLLGSCMMQRSLELG 1
+I MPF+PDV WKTLL SC + ++L++G
Sbjct: 497 MIENMPFEPDVLIWKTLLASCKLHKNLDIG 526
>ref|XP_002466113.1| hypothetical protein SORBIDRAFT_01g001570 [Sorghum bicolor]
gi|241919967|gb|EER93111.1| hypothetical protein
SORBIDRAFT_01g001570 [Sorghum bicolor]
Length = 693
Score = 115 bits (287), Expect = 8e-24
Identities = 46/90 (51%), Positives = 68/90 (75%)
Frame = -1
Query: 270 PDESTFLGILVACSHVGYVDQAVRYFKLMSDTFNIIPSASHYACMVDIMGRAGRLEEALD 91
PD+STF+ +LV C+H G V + +F+LM+D + + P+ SHYACM+D++GR GR +EAL
Sbjct: 505 PDDSTFIAVLVGCNHAGLVKEGETFFRLMTDRYGLTPTPSHYACMIDMLGRNGRFDEALH 564
Query: 90 IINQMPFKPDVATWKTLLGSCMMQRSLELG 1
+I MPF+PDV WKTLL SC + ++L++G
Sbjct: 565 MIKNMPFEPDVLIWKTLLASCKLHKNLDIG 594
>ref|XP_006650883.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Oryza brachyantha]
Length = 709
Score = 114 bits (284), Expect = 2e-23
Identities = 50/90 (55%), Positives = 67/90 (74%)
Frame = -1
Query: 270 PDESTFLGILVACSHVGYVDQAVRYFKLMSDTFNIIPSASHYACMVDIMGRAGRLEEALD 91
PDESTFLG+L+ +H G V Q +F+LM D ++ P+ SHYACM+D++GR GR EAL
Sbjct: 510 PDESTFLGVLMGYNHSGMVKQGELFFRLMIDRYSFAPTPSHYACMIDMLGRNGRFHEALL 569
Query: 90 IINQMPFKPDVATWKTLLGSCMMQRSLELG 1
+IN MPF+PD TWKTLL SC + R+L++G
Sbjct: 570 MINGMPFEPDALTWKTLLASCKLHRNLDMG 599
>gb|AFW67004.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 913
Score = 113 bits (282), Expect = 3e-23
Identities = 47/90 (52%), Positives = 66/90 (73%)
Frame = -1
Query: 270 PDESTFLGILVACSHVGYVDQAVRYFKLMSDTFNIIPSASHYACMVDIMGRAGRLEEALD 91
PD+STFL +LV C+H G V + +F+ M+D + + P+ SHYACM+D++GR GR EAL
Sbjct: 531 PDDSTFLSVLVGCNHAGLVKEGETFFRQMTDRYGLTPTPSHYACMIDMLGRNGRFAEALR 590
Query: 90 IINQMPFKPDVATWKTLLGSCMMQRSLELG 1
+I MPF+PDV WKTLL SC + R+L++G
Sbjct: 591 MIENMPFEPDVLIWKTLLASCKLHRNLDIG 620
>gb|AFW67003.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 719
Score = 113 bits (282), Expect = 3e-23
Identities = 47/90 (52%), Positives = 66/90 (73%)
Frame = -1
Query: 270 PDESTFLGILVACSHVGYVDQAVRYFKLMSDTFNIIPSASHYACMVDIMGRAGRLEEALD 91
PD+STFL +LV C+H G V + +F+ M+D + + P+ SHYACM+D++GR GR EAL
Sbjct: 531 PDDSTFLSVLVGCNHAGLVKEGETFFRQMTDRYGLTPTPSHYACMIDMLGRNGRFAEALR 590
Query: 90 IINQMPFKPDVATWKTLLGSCMMQRSLELG 1
+I MPF+PDV WKTLL SC + R+L++G
Sbjct: 591 MIENMPFEPDVLIWKTLLASCKLHRNLDIG 620
>gb|EMT14400.1| hypothetical protein F775_09464 [Aegilops tauschii]
Length = 596
Score = 112 bits (281), Expect = 4e-23
Identities = 49/91 (53%), Positives = 62/91 (68%)
Frame = -1
Query: 273 IPDESTFLGILVACSHVGYVDQAVRYFKLMSDTFNIIPSASHYACMVDIMGRAGRLEEAL 94
IP + T +G+L ACSH G+VD RYF M D + I P H CMVD++GRAGR+EEA
Sbjct: 322 IPTDITMVGVLYACSHCGWVDDGFRYFNEMKDKYGIAPKIEHLGCMVDLLGRAGRVEEAH 381
Query: 93 DIINQMPFKPDVATWKTLLGSCMMQRSLELG 1
D IN MP +P+ W+TLLG+C M + LELG
Sbjct: 382 DYINTMPLEPNAVVWRTLLGACAMHKKLELG 412
>gb|EMS46161.1| hypothetical protein TRIUR3_10442 [Triticum urartu]
Length = 492
Score = 111 bits (278), Expect = 9e-23
Identities = 43/89 (48%), Positives = 65/89 (73%)
Frame = -1
Query: 270 PDESTFLGILVACSHVGYVDQAVRYFKLMSDTFNIIPSASHYACMVDIMGRAGRLEEALD 91
P+E TF+G+L+AC+HVG V +YF M+D ++P HY CMVD++GRAG +EEA+
Sbjct: 219 PNEITFVGVLIACTHVGLVSDGKKYFSSMTDVHGVVPRVEHYGCMVDLLGRAGHVEEAMQ 278
Query: 90 IINQMPFKPDVATWKTLLGSCMMQRSLEL 4
+I MPF+PD W+TLLG+C + +++E+
Sbjct: 279 LIRSMPFEPDAIIWRTLLGACRIHKNVEI 307
>ref|XP_003559909.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Brachypodium distachyon]
Length = 585
Score = 111 bits (278), Expect = 9e-23
Identities = 44/89 (49%), Positives = 66/89 (74%)
Frame = -1
Query: 270 PDESTFLGILVACSHVGYVDQAVRYFKLMSDTFNIIPSASHYACMVDIMGRAGRLEEALD 91
P+E TF+G+L+AC+HVG V+ +YF MSD ++P HY CMVD++GRAG +EEA++
Sbjct: 312 PNEITFIGVLIACTHVGLVNDGKKYFSSMSDVHGVVPRMEHYGCMVDLLGRAGHVEEAME 371
Query: 90 IINQMPFKPDVATWKTLLGSCMMQRSLEL 4
+I M FKPD W+TLLG+C + +++E+
Sbjct: 372 LIRSMTFKPDPIIWRTLLGACRIHKNVEI 400
>gb|EMT28927.1| hypothetical protein F775_10857 [Aegilops tauschii]
Length = 746
Score = 111 bits (277), Expect = 1e-22
Identities = 49/90 (54%), Positives = 63/90 (70%)
Frame = -1
Query: 270 PDESTFLGILVACSHVGYVDQAVRYFKLMSDTFNIIPSASHYACMVDIMGRAGRLEEALD 91
PD TF+ +L ACSH G VDQ +F +M T+ IIP A HYACMVD++GRAG+L+EA D
Sbjct: 471 PDHVTFVSLLAACSHAGLVDQGRSFFDMMRITYGIIPLAKHYACMVDMLGRAGQLQEAFD 530
Query: 90 IINQMPFKPDVATWKTLLGSCMMQRSLELG 1
I+ MP KPD A W LLG+C + +E+G
Sbjct: 531 FIHNMPIKPDSAVWGALLGACRIHGDVEMG 560
>gb|EMT27537.1| Pentatricopeptide repeat-containing protein [Aegilops tauschii]
Length = 444
Score = 110 bits (276), Expect = 1e-22
Identities = 43/89 (48%), Positives = 65/89 (73%)
Frame = -1
Query: 270 PDESTFLGILVACSHVGYVDQAVRYFKLMSDTFNIIPSASHYACMVDIMGRAGRLEEALD 91
P+E TF+G+L+AC+HVG V +YF M+D ++P HY CMVD++GRAG +EEA+
Sbjct: 171 PNEITFVGVLMACTHVGLVSDGKKYFSSMTDVHGVVPRVEHYGCMVDLLGRAGHVEEAMQ 230
Query: 90 IINQMPFKPDVATWKTLLGSCMMQRSLEL 4
+I MPF+PD W+TLLG+C + +++E+
Sbjct: 231 LIRSMPFEPDAIIWRTLLGACRIHKNVEI 259
>ref|XP_004515183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cicer arietinum]
Length = 844
Score = 110 bits (275), Expect = 2e-22
Identities = 49/99 (49%), Positives = 69/99 (69%)
Frame = -1
Query: 297 KMLETPCSIPDESTFLGILVACSHVGYVDQAVRYFKLMSDTFNIIPSASHYACMVDIMGR 118
+MLET C P++ T++ +L ACSHVG +D+A ++F M + I+P HYACMVD++GR
Sbjct: 562 EMLET-CVKPNDVTYIAVLSACSHVGLIDEAWKHFTSMRNNCGIVPRMEHYACMVDLLGR 620
Query: 117 AGRLEEALDIINQMPFKPDVATWKTLLGSCMMQRSLELG 1
+G L EA++ IN MPF D W+T LGSC + R+ ELG
Sbjct: 621 SGLLSEAIEFINSMPFDADALVWRTFLGSCRVHRNTELG 659
>gb|EMS45498.1| hypothetical protein TRIUR3_12201 [Triticum urartu]
Length = 402
Score = 110 bits (275), Expect = 2e-22
Identities = 49/98 (50%), Positives = 64/98 (65%)
Frame = -1
Query: 294 MLETPCSIPDESTFLGILVACSHVGYVDQAVRYFKLMSDTFNIIPSASHYACMVDIMGRA 115
++E IP + T +G+L ACSH G VD RYF M D + I P H CMVD++GRA
Sbjct: 121 LMEREKLIPTDITMVGVLYACSHCGLVDDGFRYFNEMKDKYGIAPKIEHLGCMVDLLGRA 180
Query: 114 GRLEEALDIINQMPFKPDVATWKTLLGSCMMQRSLELG 1
GR+EEA D I+ MP +P+ W+TLLG+C M + LELG
Sbjct: 181 GRVEEAHDYISTMPLEPNAVVWRTLLGACAMHKKLELG 218