BLASTX nr result

ID: Zingiber24_contig00048681 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00048681
         (585 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516902.1| hypothetical protein RCOM_0680670 [Ricinus c...    58   2e-06

>ref|XP_002516902.1| hypothetical protein RCOM_0680670 [Ricinus communis]
           gi|223543990|gb|EEF45516.1| hypothetical protein
           RCOM_0680670 [Ricinus communis]
          Length = 755

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 45/167 (26%), Positives = 76/167 (45%), Gaps = 18/167 (10%)
 Frame = -3

Query: 583 KFTIVDTSLTQGEEPFKFMELRTLPVDAVN-----------NNDPLDNIGEIAXXXXXXX 437
           KFT+VDTSL  GE   +  ELR+L ++ +N           + DP  +   ++       
Sbjct: 376 KFTVVDTSLATGETN-RVRELRSLAIELMNVSTSRSDSEESDEDPFQDTRNVSDSSANLC 434

Query: 436 XXXXXXXXXXXDRDSSDNKVPKLKSKGINSKALQSAPSESGITFL----STTVLHN---E 278
                         S  NK   LKS  IN     S+P  +         S+ ++ +   +
Sbjct: 435 --------------SDRNKTDILKSSKINEDKRDSSPDRANFEINALEHSSPIIGSNFTK 480

Query: 277 HISRNQCVEEFNEKLPVKNLKGESSRRAKSGQLSYLAPMAKRRRLTA 137
            I + Q   ++++  P K++KG + ++ K G +++LAP+AKRRR  A
Sbjct: 481 KIPKEQKAGKYDDMRPTKSIKGHAIKKTKPGDMNFLAPVAKRRRRVA 527


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