BLASTX nr result

ID: Zingiber24_contig00048670 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00048670
         (250 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006853110.1| hypothetical protein AMTR_s00038p00132760 [A...    62   8e-08
ref|XP_004514126.1| PREDICTED: pentatricopeptide repeat-containi...    61   2e-07
gb|EPS67278.1| hypothetical protein M569_07494 [Genlisea aurea]        59   5e-07
ref|XP_006853118.1| hypothetical protein AMTR_s00038p00140720 [A...    58   1e-06
ref|XP_003607325.1| Pentatricopeptide repeat-containing protein ...    58   1e-06

>ref|XP_006853110.1| hypothetical protein AMTR_s00038p00132760 [Amborella trichopoda]
           gi|548856749|gb|ERN14577.1| hypothetical protein
           AMTR_s00038p00132760 [Amborella trichopoda]
          Length = 757

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 32/81 (39%), Positives = 47/81 (58%)
 Frame = -1

Query: 250 LIEMASKCGSNSSSFDHLLTFYTRTGKVEEAVEAFKSMVENDIFPCVESRNGLLLSMLRS 71
           L+E + +C S+   FD +L  YTR G V E+VEA+K +V N +FP +E  N  L  ++R 
Sbjct: 172 LMETSKRCESHPQVFDLVLNGYTRHGSVPESVEAYKRLVSNGVFPSIECINLHLRKLVRL 231

Query: 70  GSYSTALELFEEMRDKGMNYD 8
                A  L+ EM D+G + D
Sbjct: 232 DFVDEAWNLYREMVDRGADLD 252


>ref|XP_004514126.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cicer arietinum]
          Length = 850

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 32/85 (37%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
 Frame = -1

Query: 250 LIEMASKCGSNSSS--FDHLLTFYTRTGKVEEAVEAFKSMVENDIFPCVESRNGLLLSML 77
           L+E + + G  S S  F++LL  Y R  K+ +AVE F++++E+D+ P V   N LL +M+
Sbjct: 153 LLECSGRYGFESDSRVFNYLLNSYVRANKIVDAVECFRTLLEHDVIPWVPIMNILLTAMV 212

Query: 76  RSGSYSTALELFEEMRDKGMNYDKF 2
           R      A +L++EM ++GM  D F
Sbjct: 213 RRNMICNARQLYDEMVERGMYGDCF 237


>gb|EPS67278.1| hypothetical protein M569_07494 [Genlisea aurea]
          Length = 771

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 28/80 (35%), Positives = 48/80 (60%)
 Frame = -1

Query: 241 MASKCGSNSSSFDHLLTFYTRTGKVEEAVEAFKSMVENDIFPCVESRNGLLLSMLRSGSY 62
           M+  C  N++++D L++ + +  ++EEA E  + +    I P V + N LL     SGS+
Sbjct: 376 MSRNCYPNAATYDVLISGFIKENRIEEATELSRVLTSKGILPDVSTFNTLLRGQCLSGSH 435

Query: 61  STALELFEEMRDKGMNYDKF 2
           ++A+ELF EM+ KG   D+F
Sbjct: 436 TSAMELFSEMKSKGCKPDEF 455


>ref|XP_006853118.1| hypothetical protein AMTR_s00038p00140720 [Amborella trichopoda]
           gi|548856757|gb|ERN14585.1| hypothetical protein
           AMTR_s00038p00140720 [Amborella trichopoda]
          Length = 855

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 29/81 (35%), Positives = 47/81 (58%)
 Frame = -1

Query: 250 LIEMASKCGSNSSSFDHLLTFYTRTGKVEEAVEAFKSMVENDIFPCVESRNGLLLSMLRS 71
           L+E + +C S+   FD +L  YTR G V E++E +  +V N +FP V   N LL  ++R 
Sbjct: 164 LLETSERCNSHPRVFDLVLNGYTRYGSVTESLETYHRLVSNGVFPSVGCINLLLNKLVRL 223

Query: 70  GSYSTALELFEEMRDKGMNYD 8
                A +L+ EM ++G++ D
Sbjct: 224 NFIDEAWDLYREMVERGVDLD 244


>ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355508380|gb|AES89522.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 834

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 30/83 (36%), Positives = 51/83 (61%), Gaps = 2/83 (2%)
 Frame = -1

Query: 250 LIEMASKCGSNSSS--FDHLLTFYTRTGKVEEAVEAFKSMVENDIFPCVESRNGLLLSML 77
           L+E + + G  S S  F++LL  + R  K+ +AVE F++M+E+D+ P V   N LL +M+
Sbjct: 137 LLECSGRYGFESDSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMV 196

Query: 76  RSGSYSTALELFEEMRDKGMNYD 8
           R      A +L++EM ++G+  D
Sbjct: 197 RRNMVCDARQLYDEMVERGIYGD 219


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