BLASTX nr result
ID: Zingiber24_contig00048655
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00048655
(410 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004982721.1| PREDICTED: mediator of RNA polymerase II tra... 130 1e-28
ref|XP_004982720.1| PREDICTED: mediator of RNA polymerase II tra... 130 1e-28
gb|ESW20182.1| hypothetical protein PHAVU_006G1876001g, partial ... 130 2e-28
ref|XP_003574131.1| PREDICTED: uncharacterized protein LOC100836... 129 4e-28
ref|XP_002467000.1| hypothetical protein SORBIDRAFT_01g018130 [S... 129 4e-28
ref|NP_001136804.1| uncharacterized protein LOC100216950 [Zea ma... 129 5e-28
ref|XP_006662479.1| PREDICTED: mediator of RNA polymerase II tra... 128 7e-28
ref|XP_006594603.1| PREDICTED: mediator of RNA polymerase II tra... 128 9e-28
ref|XP_003543060.2| PREDICTED: mediator of RNA polymerase II tra... 128 9e-28
gb|EOY28294.1| Sensitive to freezing 6 [Theobroma cacao] 127 2e-27
ref|XP_002519035.1| conserved hypothetical protein [Ricinus comm... 127 2e-27
ref|XP_006467829.1| PREDICTED: mediator of RNA polymerase II tra... 126 3e-27
ref|XP_006467828.1| PREDICTED: mediator of RNA polymerase II tra... 126 3e-27
ref|XP_006449306.1| hypothetical protein CICLE_v10014062mg [Citr... 126 3e-27
ref|XP_004485759.1| PREDICTED: mediator of RNA polymerase II tra... 126 3e-27
ref|XP_004485758.1| PREDICTED: mediator of RNA polymerase II tra... 126 3e-27
ref|XP_004485757.1| PREDICTED: mediator of RNA polymerase II tra... 126 3e-27
ref|XP_002305810.2| hypothetical protein POPTR_0004s04050g [Popu... 125 4e-27
ref|XP_002305019.2| hypothetical protein POPTR_0004s04040g [Popu... 125 4e-27
gb|AAM93675.1| putative glycine-rich protein [Oryza sativa Japon... 124 1e-26
>ref|XP_004982721.1| PREDICTED: mediator of RNA polymerase II transcription subunit
16-like isoform X2 [Setaria italica]
Length = 1291
Score = 130 bits (328), Expect = 1e-28
Identities = 53/70 (75%), Positives = 59/70 (84%)
Frame = +1
Query: 1 GIMGSRRDVIASVWRTGAEGVWYKCIRCLRQTCAFAQPHNSNSPNEREAWWIGRWVHGCP 180
G+MGSRRDVI +VWRTG +G WYKC+RCLRQTCAFAQP N NEREAWWI RW H CP
Sbjct: 1222 GVMGSRRDVITAVWRTGLDGEWYKCVRCLRQTCAFAQPGAPNPTNEREAWWISRWSHACP 1281
Query: 181 MCGGAWVRVV 210
MCGG+WV+VV
Sbjct: 1282 MCGGSWVKVV 1291
>ref|XP_004982720.1| PREDICTED: mediator of RNA polymerase II transcription subunit
16-like isoform X1 [Setaria italica]
Length = 1292
Score = 130 bits (328), Expect = 1e-28
Identities = 53/70 (75%), Positives = 59/70 (84%)
Frame = +1
Query: 1 GIMGSRRDVIASVWRTGAEGVWYKCIRCLRQTCAFAQPHNSNSPNEREAWWIGRWVHGCP 180
G+MGSRRDVI +VWRTG +G WYKC+RCLRQTCAFAQP N NEREAWWI RW H CP
Sbjct: 1223 GVMGSRRDVITAVWRTGLDGEWYKCVRCLRQTCAFAQPGAPNPTNEREAWWISRWSHACP 1282
Query: 181 MCGGAWVRVV 210
MCGG+WV+VV
Sbjct: 1283 MCGGSWVKVV 1292
>gb|ESW20182.1| hypothetical protein PHAVU_006G1876001g, partial [Phaseolus vulgaris]
Length = 1151
Score = 130 bits (326), Expect = 2e-28
Identities = 52/72 (72%), Positives = 62/72 (86%), Gaps = 2/72 (2%)
Frame = +1
Query: 1 GIMGSRRDVIASVWRTGAEGVWYKCIRCLRQTCAFAQPHNSN--SPNEREAWWIGRWVHG 174
GIMGSRRDV+ ++W+TG EG+WYKCIRCLRQTCAFA P ++N SPN+R+ WWI RW HG
Sbjct: 1080 GIMGSRRDVVTALWKTGLEGIWYKCIRCLRQTCAFASPASTNLPSPNDRDIWWISRWAHG 1139
Query: 175 CPMCGGAWVRVV 210
CP+CGG WVRVV
Sbjct: 1140 CPICGGTWVRVV 1151
>ref|XP_003574131.1| PREDICTED: uncharacterized protein LOC100836267 [Brachypodium
distachyon]
Length = 1305
Score = 129 bits (324), Expect = 4e-28
Identities = 52/70 (74%), Positives = 59/70 (84%)
Frame = +1
Query: 1 GIMGSRRDVIASVWRTGAEGVWYKCIRCLRQTCAFAQPHNSNSPNEREAWWIGRWVHGCP 180
G+MGSRRDVI +VW+TG +G WYKCIRCLRQTCAFAQP N NERE+WWI RW H CP
Sbjct: 1236 GVMGSRRDVITAVWKTGLDGEWYKCIRCLRQTCAFAQPGVPNPANERESWWISRWTHACP 1295
Query: 181 MCGGAWVRVV 210
MCGG+WV+VV
Sbjct: 1296 MCGGSWVKVV 1305
>ref|XP_002467000.1| hypothetical protein SORBIDRAFT_01g018130 [Sorghum bicolor]
gi|241920854|gb|EER93998.1| hypothetical protein
SORBIDRAFT_01g018130 [Sorghum bicolor]
Length = 1298
Score = 129 bits (324), Expect = 4e-28
Identities = 52/70 (74%), Positives = 58/70 (82%)
Frame = +1
Query: 1 GIMGSRRDVIASVWRTGAEGVWYKCIRCLRQTCAFAQPHNSNSPNEREAWWIGRWVHGCP 180
G+MGSRRDV+ +VWRTG +G WYKCIRCLRQTCAFA P N NEREAWWI RW H CP
Sbjct: 1229 GVMGSRRDVVTAVWRTGLDGEWYKCIRCLRQTCAFAHPGAPNQTNEREAWWISRWSHACP 1288
Query: 181 MCGGAWVRVV 210
MCGG+WV+VV
Sbjct: 1289 MCGGSWVKVV 1298
>ref|NP_001136804.1| uncharacterized protein LOC100216950 [Zea mays]
gi|194697182|gb|ACF82675.1| unknown [Zea mays]
gi|238013060|gb|ACR37565.1| unknown [Zea mays]
Length = 303
Score = 129 bits (323), Expect = 5e-28
Identities = 52/70 (74%), Positives = 58/70 (82%)
Frame = +1
Query: 1 GIMGSRRDVIASVWRTGAEGVWYKCIRCLRQTCAFAQPHNSNSPNEREAWWIGRWVHGCP 180
G+MGSRRDV+ +VWRTG +G WYKCIRCLRQTCAFA P N NEREAWWI RW H CP
Sbjct: 234 GVMGSRRDVVTAVWRTGLDGDWYKCIRCLRQTCAFAHPGAPNQTNEREAWWISRWSHACP 293
Query: 181 MCGGAWVRVV 210
MCGG+WV+VV
Sbjct: 294 MCGGSWVKVV 303
>ref|XP_006662479.1| PREDICTED: mediator of RNA polymerase II transcription subunit
16-like [Oryza brachyantha]
Length = 1169
Score = 128 bits (322), Expect = 7e-28
Identities = 52/70 (74%), Positives = 59/70 (84%)
Frame = +1
Query: 1 GIMGSRRDVIASVWRTGAEGVWYKCIRCLRQTCAFAQPHNSNSPNEREAWWIGRWVHGCP 180
G+MGSRRDVI +VW+TG +G WYKCIRCLRQTCAFAQP N+ NE EAWWI RW H CP
Sbjct: 1100 GVMGSRRDVITAVWKTGLDGGWYKCIRCLRQTCAFAQPGAPNTTNELEAWWISRWTHACP 1159
Query: 181 MCGGAWVRVV 210
MCGG+WV+VV
Sbjct: 1160 MCGGSWVKVV 1169
>ref|XP_006594603.1| PREDICTED: mediator of RNA polymerase II transcription subunit
16-like isoform X2 [Glycine max]
Length = 1055
Score = 128 bits (321), Expect = 9e-28
Identities = 52/72 (72%), Positives = 61/72 (84%), Gaps = 2/72 (2%)
Frame = +1
Query: 1 GIMGSRRDVIASVWRTGAEGVWYKCIRCLRQTCAFAQPHNSNSP--NEREAWWIGRWVHG 174
GIMGSRRDV+ ++W+TG EG+WYKCIRCLRQTCAFA P ++N P N+RE WWI RW +G
Sbjct: 984 GIMGSRRDVVTALWKTGLEGIWYKCIRCLRQTCAFASPASTNLPSQNDREIWWISRWAYG 1043
Query: 175 CPMCGGAWVRVV 210
CPMCGG WVRVV
Sbjct: 1044 CPMCGGTWVRVV 1055
>ref|XP_003543060.2| PREDICTED: mediator of RNA polymerase II transcription subunit
16-like isoform X1 [Glycine max]
Length = 1226
Score = 128 bits (321), Expect = 9e-28
Identities = 52/72 (72%), Positives = 61/72 (84%), Gaps = 2/72 (2%)
Frame = +1
Query: 1 GIMGSRRDVIASVWRTGAEGVWYKCIRCLRQTCAFAQPHNSNSP--NEREAWWIGRWVHG 174
GIMGSRRDV+ ++W+TG EG+WYKCIRCLRQTCAFA P ++N P N+RE WWI RW +G
Sbjct: 1155 GIMGSRRDVVTALWKTGLEGIWYKCIRCLRQTCAFASPASTNLPSQNDREIWWISRWAYG 1214
Query: 175 CPMCGGAWVRVV 210
CPMCGG WVRVV
Sbjct: 1215 CPMCGGTWVRVV 1226
>gb|EOY28294.1| Sensitive to freezing 6 [Theobroma cacao]
Length = 1249
Score = 127 bits (318), Expect = 2e-27
Identities = 54/72 (75%), Positives = 60/72 (83%), Gaps = 2/72 (2%)
Frame = +1
Query: 1 GIMGSRRDVIASVWRTGAEGVWYKCIRCLRQTCAFAQPHNSN--SPNEREAWWIGRWVHG 174
GIMGSRRDV+ +VW+TG EGVWYKCIRCLRQT AFA P +++ S NERE WWI RW HG
Sbjct: 1178 GIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTSAFASPGSTSQRSQNERETWWISRWAHG 1237
Query: 175 CPMCGGAWVRVV 210
CPMCGG WVRVV
Sbjct: 1238 CPMCGGTWVRVV 1249
>ref|XP_002519035.1| conserved hypothetical protein [Ricinus communis]
gi|223541698|gb|EEF43246.1| conserved hypothetical
protein [Ricinus communis]
Length = 1255
Score = 127 bits (318), Expect = 2e-27
Identities = 54/72 (75%), Positives = 60/72 (83%), Gaps = 2/72 (2%)
Frame = +1
Query: 1 GIMGSRRDVIASVWRTGAEGVWYKCIRCLRQTCAFAQPHNSNSP--NEREAWWIGRWVHG 174
GIMGSRRDV+ +VW+TG EGVWYKCIRCLRQT AFA P +N P N+REAWWI RW +G
Sbjct: 1184 GIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTSAFASPGATNPPNQNDREAWWISRWAYG 1243
Query: 175 CPMCGGAWVRVV 210
CPMCGG WVRVV
Sbjct: 1244 CPMCGGTWVRVV 1255
>ref|XP_006467829.1| PREDICTED: mediator of RNA polymerase II transcription subunit
16-like isoform X2 [Citrus sinensis]
Length = 1057
Score = 126 bits (316), Expect = 3e-27
Identities = 54/72 (75%), Positives = 59/72 (81%), Gaps = 2/72 (2%)
Frame = +1
Query: 1 GIMGSRRDVIASVWRTGAEGVWYKCIRCLRQTCAFAQPHNSNSP--NEREAWWIGRWVHG 174
GIMGSRRDV+ +VW+TG EGVWYKCIRCLRQT AFA P +N P N+REAWWI RW G
Sbjct: 986 GIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTAAFASPGATNPPNQNDREAWWISRWAFG 1045
Query: 175 CPMCGGAWVRVV 210
CPMCGG WVRVV
Sbjct: 1046 CPMCGGTWVRVV 1057
>ref|XP_006467828.1| PREDICTED: mediator of RNA polymerase II transcription subunit
16-like isoform X1 [Citrus sinensis]
Length = 1255
Score = 126 bits (316), Expect = 3e-27
Identities = 54/72 (75%), Positives = 59/72 (81%), Gaps = 2/72 (2%)
Frame = +1
Query: 1 GIMGSRRDVIASVWRTGAEGVWYKCIRCLRQTCAFAQPHNSNSP--NEREAWWIGRWVHG 174
GIMGSRRDV+ +VW+TG EGVWYKCIRCLRQT AFA P +N P N+REAWWI RW G
Sbjct: 1184 GIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTAAFASPGATNPPNQNDREAWWISRWAFG 1243
Query: 175 CPMCGGAWVRVV 210
CPMCGG WVRVV
Sbjct: 1244 CPMCGGTWVRVV 1255
>ref|XP_006449306.1| hypothetical protein CICLE_v10014062mg [Citrus clementina]
gi|557551917|gb|ESR62546.1| hypothetical protein
CICLE_v10014062mg [Citrus clementina]
Length = 1252
Score = 126 bits (316), Expect = 3e-27
Identities = 54/72 (75%), Positives = 59/72 (81%), Gaps = 2/72 (2%)
Frame = +1
Query: 1 GIMGSRRDVIASVWRTGAEGVWYKCIRCLRQTCAFAQPHNSNSP--NEREAWWIGRWVHG 174
GIMGSRRDV+ +VW+TG EGVWYKCIRCLRQT AFA P +N P N+REAWWI RW G
Sbjct: 1181 GIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTAAFASPGATNPPNQNDREAWWISRWAFG 1240
Query: 175 CPMCGGAWVRVV 210
CPMCGG WVRVV
Sbjct: 1241 CPMCGGTWVRVV 1252
>ref|XP_004485759.1| PREDICTED: mediator of RNA polymerase II transcription subunit
16-like isoform X3 [Cicer arietinum]
Length = 1027
Score = 126 bits (316), Expect = 3e-27
Identities = 51/72 (70%), Positives = 60/72 (83%), Gaps = 2/72 (2%)
Frame = +1
Query: 1 GIMGSRRDVIASVWRTGAEGVWYKCIRCLRQTCAFAQPHNSNSP--NEREAWWIGRWVHG 174
GIMGSRRDV+ ++W+TG EGVWYKCIRCLRQTCAFA P ++N P N+RE WW+ RW +G
Sbjct: 956 GIMGSRRDVVTTLWKTGLEGVWYKCIRCLRQTCAFASPGSTNLPNQNDREIWWVSRWAYG 1015
Query: 175 CPMCGGAWVRVV 210
CPMCGG W RVV
Sbjct: 1016 CPMCGGRWARVV 1027
>ref|XP_004485758.1| PREDICTED: mediator of RNA polymerase II transcription subunit
16-like isoform X2 [Cicer arietinum]
Length = 1047
Score = 126 bits (316), Expect = 3e-27
Identities = 51/72 (70%), Positives = 60/72 (83%), Gaps = 2/72 (2%)
Frame = +1
Query: 1 GIMGSRRDVIASVWRTGAEGVWYKCIRCLRQTCAFAQPHNSNSP--NEREAWWIGRWVHG 174
GIMGSRRDV+ ++W+TG EGVWYKCIRCLRQTCAFA P ++N P N+RE WW+ RW +G
Sbjct: 976 GIMGSRRDVVTTLWKTGLEGVWYKCIRCLRQTCAFASPGSTNLPNQNDREIWWVSRWAYG 1035
Query: 175 CPMCGGAWVRVV 210
CPMCGG W RVV
Sbjct: 1036 CPMCGGRWARVV 1047
>ref|XP_004485757.1| PREDICTED: mediator of RNA polymerase II transcription subunit
16-like isoform X1 [Cicer arietinum]
Length = 1247
Score = 126 bits (316), Expect = 3e-27
Identities = 51/72 (70%), Positives = 60/72 (83%), Gaps = 2/72 (2%)
Frame = +1
Query: 1 GIMGSRRDVIASVWRTGAEGVWYKCIRCLRQTCAFAQPHNSNSP--NEREAWWIGRWVHG 174
GIMGSRRDV+ ++W+TG EGVWYKCIRCLRQTCAFA P ++N P N+RE WW+ RW +G
Sbjct: 1176 GIMGSRRDVVTTLWKTGLEGVWYKCIRCLRQTCAFASPGSTNLPNQNDREIWWVSRWAYG 1235
Query: 175 CPMCGGAWVRVV 210
CPMCGG W RVV
Sbjct: 1236 CPMCGGRWARVV 1247
>ref|XP_002305810.2| hypothetical protein POPTR_0004s04050g [Populus trichocarpa]
gi|550340281|gb|EEE86321.2| hypothetical protein
POPTR_0004s04050g [Populus trichocarpa]
Length = 1328
Score = 125 bits (315), Expect = 4e-27
Identities = 54/72 (75%), Positives = 59/72 (81%), Gaps = 2/72 (2%)
Frame = +1
Query: 1 GIMGSRRDVIASVWRTGAEGVWYKCIRCLRQTCAFAQPHNSNSP--NEREAWWIGRWVHG 174
GIMGSRRDV+ +VW+TG EGVWYKCIRCLRQT A A P +N P NEREAWWI RW +G
Sbjct: 1257 GIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTSALASPGAANPPDQNEREAWWISRWAYG 1316
Query: 175 CPMCGGAWVRVV 210
CPMCGG WVRVV
Sbjct: 1317 CPMCGGTWVRVV 1328
>ref|XP_002305019.2| hypothetical protein POPTR_0004s04040g [Populus trichocarpa]
gi|550340280|gb|EEE85530.2| hypothetical protein
POPTR_0004s04040g [Populus trichocarpa]
Length = 1236
Score = 125 bits (315), Expect = 4e-27
Identities = 54/72 (75%), Positives = 59/72 (81%), Gaps = 2/72 (2%)
Frame = +1
Query: 1 GIMGSRRDVIASVWRTGAEGVWYKCIRCLRQTCAFAQPHNSNSP--NEREAWWIGRWVHG 174
GIMGSRRDV+ +VW+TG EGVWYKCIRCLRQT A A P +N P NEREAWWI RW +G
Sbjct: 1165 GIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTSALASPGAANPPDQNEREAWWISRWAYG 1224
Query: 175 CPMCGGAWVRVV 210
CPMCGG WVRVV
Sbjct: 1225 CPMCGGTWVRVV 1236
>gb|AAM93675.1| putative glycine-rich protein [Oryza sativa Japonica Group]
Length = 1291
Score = 124 bits (312), Expect = 1e-26
Identities = 53/72 (73%), Positives = 58/72 (80%), Gaps = 2/72 (2%)
Frame = +1
Query: 1 GIMGSRRDVIASVWRTGAEGVWYKCIRCLRQTCAFAQPH--NSNSPNEREAWWIGRWVHG 174
G+MGSRRDVI +VW+TG EG WYKCIRCLRQTCAFAQP N+ NE EAWWI RW H
Sbjct: 1220 GVMGSRRDVITAVWKTGLEGEWYKCIRCLRQTCAFAQPGALAPNTSNELEAWWISRWTHA 1279
Query: 175 CPMCGGAWVRVV 210
CPMCGG WV+VV
Sbjct: 1280 CPMCGGTWVKVV 1291