BLASTX nr result
ID: Zingiber24_contig00048477
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00048477
(438 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMT07008.1| Geranylgeranyl pyrophosphate synthetase, chloropl... 142 6e-32
gb|EMS59518.1| Geranylgeranyl pyrophosphate synthase, chloroplas... 137 2e-30
gb|AAL17614.2|AF425235_1 geranylgeranyl diphosphate synthase [Ab... 132 6e-29
gb|ADL16411.1| geranylgeranyl diphosphate synthase [Dunaliella v... 128 7e-28
gb|AHE15048.1| isoprenyl diphosphate synthase, partial [Picea gl... 128 9e-28
gb|ACN40956.1| unknown [Picea sitchensis] 128 9e-28
gb|AGU43761.1| geranylgeranyl diphosphate synthase [Pinus masson... 127 1e-27
gb|ACZ57571.1| isoprenyl diphosphate synthase [Picea abies] 127 2e-27
ref|XP_006482126.1| PREDICTED: heterodimeric geranylgeranyl pyro... 127 2e-27
ref|XP_006430612.1| hypothetical protein CICLE_v10013734mg [Citr... 127 2e-27
gb|ESW28890.1| hypothetical protein PHAVU_002G026400g [Phaseolus... 126 3e-27
ref|XP_003547995.1| PREDICTED: geranylgeranyl pyrophosphate synt... 126 3e-27
gb|ACA21461.1| geranylgeranyl diphosphate synthase 5 [Picea abie... 126 3e-27
ref|XP_006430614.1| hypothetical protein CICLE_v10012011mg [Citr... 125 4e-27
gb|AAN01133.1| geranyl diphosphate synthase [Abies grandis] 125 4e-27
gb|EOY03943.1| Geranylgeranyl pyrophosphate synthase 1 [Theobrom... 125 6e-27
ref|XP_002869021.1| hypothetical protein ARALYDRAFT_490952 [Arab... 125 6e-27
ref|NP_195399.1| geranylgeranyl pyrophosphate synthase 1 [Arabid... 125 8e-27
gb|AAM65107.1| geranylgeranyl pyrophosphate synthase [Arabidopsi... 125 8e-27
ref|XP_006482129.1| PREDICTED: geranylgeranyl pyrophosphate synt... 124 1e-26
>gb|EMT07008.1| Geranylgeranyl pyrophosphate synthetase, chloroplastic [Aegilops
tauschii]
Length = 431
Score = 142 bits (357), Expect = 6e-32
Identities = 67/104 (64%), Positives = 82/104 (78%)
Frame = +1
Query: 127 VRCASSAPEAVAHETDLFDLKRYMTEKARRVDDSLDRALPLRHPERLLAAMRYSLLAPGK 306
VRCA ++ V + D F L+RYM KA V+++LDRALPL HPERL +MRYSL A GK
Sbjct: 44 VRCALTSTSTVFKDKDPFSLERYMASKAMTVNEALDRALPLGHPERLFESMRYSLFAGGK 103
Query: 307 RVRPVLTLAACELVGGEESTAMPFACAVEMLHVMSLVHDDLPCI 438
RVRP+L LAACELVGG+E+ A+P ACAVEM+H MSL+HDDLPC+
Sbjct: 104 RVRPMLALAACELVGGDEAAALPVACAVEMVHTMSLIHDDLPCM 147
>gb|EMS59518.1| Geranylgeranyl pyrophosphate synthase, chloroplastic [Triticum
urartu]
Length = 369
Score = 137 bits (344), Expect = 2e-30
Identities = 66/104 (63%), Positives = 81/104 (77%)
Frame = +1
Query: 127 VRCASSAPEAVAHETDLFDLKRYMTEKARRVDDSLDRALPLRHPERLLAAMRYSLLAPGK 306
VRCA ++ V + D L+RYM KA V+++LDRALPL HPERL +MRYSL A GK
Sbjct: 24 VRCAPTSTSTVFKDKDPCSLERYMASKAMTVNEALDRALPLGHPERLFESMRYSLFAGGK 83
Query: 307 RVRPVLTLAACELVGGEESTAMPFACAVEMLHVMSLVHDDLPCI 438
RVRP+LTLAACELVGG+E+ A+P A AVEM+H MSL+HDDLPC+
Sbjct: 84 RVRPMLTLAACELVGGDEAAALPVAYAVEMVHTMSLIHDDLPCM 127
>gb|AAL17614.2|AF425235_1 geranylgeranyl diphosphate synthase [Abies grandis]
Length = 383
Score = 132 bits (331), Expect = 6e-29
Identities = 62/100 (62%), Positives = 78/100 (78%)
Frame = +1
Query: 139 SSAPEAVAHETDLFDLKRYMTEKARRVDDSLDRALPLRHPERLLAAMRYSLLAPGKRVRP 318
++ PE V + FD K Y+ KA V+++LDRA+PLR+PER+ AMRYSLLA GKRVRP
Sbjct: 76 TNLPEKVKEKVIEFDFKEYLRSKAMAVNEALDRAVPLRYPERIHEAMRYSLLAGGKRVRP 135
Query: 319 VLTLAACELVGGEESTAMPFACAVEMLHVMSLVHDDLPCI 438
VL ++ACELVGG E AMP ACA+EM+H MSL+HDDLPC+
Sbjct: 136 VLCISACELVGGTEEVAMPTACAMEMIHTMSLIHDDLPCM 175
>gb|ADL16411.1| geranylgeranyl diphosphate synthase [Dunaliella viridis]
Length = 345
Score = 128 bits (322), Expect = 7e-28
Identities = 69/123 (56%), Positives = 85/123 (69%), Gaps = 2/123 (1%)
Frame = +1
Query: 70 SCSSPS--WGVAARPRRLLPGVRCASSAPEAVAHETDLFDLKRYMTEKARRVDDSLDRAL 243
SCS P+ W V+ R L ++A A T FD K YM ++A V+++LD+AL
Sbjct: 19 SCSRPAAAWRVSRSSCRTL----AIATADGAAKQSTASFDFKGYMKQRAVMVNEALDKAL 74
Query: 244 PLRHPERLLAAMRYSLLAPGKRVRPVLTLAACELVGGEESTAMPFACAVEMLHVMSLVHD 423
P RHPE LL +MRYSLLA GKRVRP LTLAACE+VGG TAMP ACA+E++H MSL+HD
Sbjct: 75 PRRHPEVLLDSMRYSLLAGGKRVRPALTLAACEMVGGSIETAMPTACAMEVVHTMSLIHD 134
Query: 424 DLP 432
DLP
Sbjct: 135 DLP 137
>gb|AHE15048.1| isoprenyl diphosphate synthase, partial [Picea glauca]
Length = 383
Score = 128 bits (321), Expect = 9e-28
Identities = 63/114 (55%), Positives = 82/114 (71%), Gaps = 6/114 (5%)
Frame = +1
Query: 109 RRLLPGVRCASS------APEAVAHETDLFDLKRYMTEKARRVDDSLDRALPLRHPERLL 270
R L+ +RC+++ E V + FD K YM KA V+++LDRA+PLR+PE++
Sbjct: 60 RHLVSSLRCSNTNAQLANLSEQVKEKVTEFDFKEYMRSKAMSVNEALDRAVPLRYPEKIH 119
Query: 271 AAMRYSLLAPGKRVRPVLTLAACELVGGEESTAMPFACAVEMLHVMSLVHDDLP 432
AMRYSLLA GKRVRP+L +AACELVGG E AMP ACA+E++H MSL+HDDLP
Sbjct: 120 EAMRYSLLAGGKRVRPILCIAACELVGGSEELAMPTACAMEIIHTMSLIHDDLP 173
>gb|ACN40956.1| unknown [Picea sitchensis]
Length = 383
Score = 128 bits (321), Expect = 9e-28
Identities = 63/114 (55%), Positives = 82/114 (71%), Gaps = 6/114 (5%)
Frame = +1
Query: 109 RRLLPGVRCASS------APEAVAHETDLFDLKRYMTEKARRVDDSLDRALPLRHPERLL 270
R L+ +RC+++ E V + FD K YM KA V+++LDRA+PLR+PE++
Sbjct: 60 RHLVSSLRCSNTNAQLANLSEQVKEKVTEFDFKEYMRSKAMSVNEALDRAVPLRYPEKIH 119
Query: 271 AAMRYSLLAPGKRVRPVLTLAACELVGGEESTAMPFACAVEMLHVMSLVHDDLP 432
AMRYSLLA GKRVRP+L +AACELVGG E AMP ACA+E++H MSL+HDDLP
Sbjct: 120 EAMRYSLLAGGKRVRPILCIAACELVGGSEELAMPTACAMEIIHTMSLIHDDLP 173
>gb|AGU43761.1| geranylgeranyl diphosphate synthase [Pinus massoniana]
Length = 380
Score = 127 bits (320), Expect = 1e-27
Identities = 63/114 (55%), Positives = 82/114 (71%), Gaps = 5/114 (4%)
Frame = +1
Query: 112 RLLPGVRCASSAPEAV-----AHETDLFDLKRYMTEKARRVDDSLDRALPLRHPERLLAA 276
+L+ RC+S+ + A FD K Y+ KA V+++L+RA+PLR+PE++ A
Sbjct: 59 KLVSSCRCSSTIDQLANLREKARAVVQFDFKEYLQSKAISVNEALERAVPLRYPEKIHEA 118
Query: 277 MRYSLLAPGKRVRPVLTLAACELVGGEESTAMPFACAVEMLHVMSLVHDDLPCI 438
MRYSLLA GKRVRPVL +AACELVGG E AMP ACA+EM+H MSL+HDDLPC+
Sbjct: 119 MRYSLLAGGKRVRPVLCIAACELVGGTEELAMPTACAMEMIHTMSLIHDDLPCM 172
>gb|ACZ57571.1| isoprenyl diphosphate synthase [Picea abies]
Length = 383
Score = 127 bits (319), Expect = 2e-27
Identities = 63/114 (55%), Positives = 82/114 (71%), Gaps = 6/114 (5%)
Frame = +1
Query: 109 RRLLPGVRCASS------APEAVAHETDLFDLKRYMTEKARRVDDSLDRALPLRHPERLL 270
R L+ +RC+++ E V + FD K YM KA V+++LDRA+PLR+PE++
Sbjct: 60 RHLVSSLRCSNTNAQLANLSEQVKGKVTEFDFKEYMRSKAMSVNEALDRAVPLRYPEKIH 119
Query: 271 AAMRYSLLAPGKRVRPVLTLAACELVGGEESTAMPFACAVEMLHVMSLVHDDLP 432
AMRYSLLA GKRVRP+L +AACELVGG E AMP ACA+E++H MSL+HDDLP
Sbjct: 120 EAMRYSLLAGGKRVRPILCIAACELVGGSEELAMPTACAMEIIHTMSLIHDDLP 173
>ref|XP_006482126.1| PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase
large subunit 1, chloroplastic-like [Citrus sinensis]
Length = 364
Score = 127 bits (318), Expect = 2e-27
Identities = 58/88 (65%), Positives = 73/88 (82%)
Frame = +1
Query: 175 LFDLKRYMTEKARRVDDSLDRALPLRHPERLLAAMRYSLLAPGKRVRPVLTLAACELVGG 354
+F + YMT KA+RV+ +LD + LRHP ++ AMRYSLLA GKRVRPVL +A+CELVGG
Sbjct: 71 IFQFEEYMTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGG 130
Query: 355 EESTAMPFACAVEMLHVMSLVHDDLPCI 438
+ES+AMP ACA+EM+H MSLVHDDLPC+
Sbjct: 131 DESSAMPVACALEMIHTMSLVHDDLPCM 158
>ref|XP_006430612.1| hypothetical protein CICLE_v10013734mg [Citrus clementina]
gi|557532669|gb|ESR43852.1| hypothetical protein
CICLE_v10013734mg [Citrus clementina]
Length = 364
Score = 127 bits (318), Expect = 2e-27
Identities = 58/88 (65%), Positives = 73/88 (82%)
Frame = +1
Query: 175 LFDLKRYMTEKARRVDDSLDRALPLRHPERLLAAMRYSLLAPGKRVRPVLTLAACELVGG 354
+F + YMT KA+RV+ +LD + LRHP ++ AMRYSLLA GKRVRPVL +A+CELVGG
Sbjct: 71 IFQFEEYMTSKAKRVNKALDETVQLRHPAKIHEAMRYSLLAGGKRVRPVLCIASCELVGG 130
Query: 355 EESTAMPFACAVEMLHVMSLVHDDLPCI 438
+ES+AMP ACA+EM+H MSLVHDDLPC+
Sbjct: 131 DESSAMPVACALEMIHTMSLVHDDLPCM 158
>gb|ESW28890.1| hypothetical protein PHAVU_002G026400g [Phaseolus vulgaris]
Length = 357
Score = 126 bits (317), Expect = 3e-27
Identities = 67/131 (51%), Positives = 87/131 (66%)
Frame = +1
Query: 46 PAFAQVMTSCSSPSWGVAARPRRLLPGVRCASSAPEAVAHETDLFDLKRYMTEKARRVDD 225
P ++ +S S S V+A P ++ +S E FD K YM KA V+
Sbjct: 26 PPTPKLSSSSSFHSLSVSAVPTKV------DTSTVRIAEIEDQTFDFKVYMLHKAHTVNK 79
Query: 226 SLDRALPLRHPERLLAAMRYSLLAPGKRVRPVLTLAACELVGGEESTAMPFACAVEMLHV 405
+LD A+ LR PE++ AMRYSLLA GKRVRP+L +AACELVGG+E+TA+P ACAVEM+H
Sbjct: 80 ALDAAIALRDPEKIHKAMRYSLLAGGKRVRPILCIAACELVGGDEATAIPSACAVEMIHT 139
Query: 406 MSLVHDDLPCI 438
MSL+HDDLPC+
Sbjct: 140 MSLIHDDLPCM 150
>ref|XP_003547995.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Glycine max]
Length = 367
Score = 126 bits (317), Expect = 3e-27
Identities = 59/88 (67%), Positives = 72/88 (81%)
Frame = +1
Query: 175 LFDLKRYMTEKARRVDDSLDRALPLRHPERLLAAMRYSLLAPGKRVRPVLTLAACELVGG 354
+FD K YM KA V+ +LD A+ LR P+++ AMRYSLLA GKRVRPVL +AACELVGG
Sbjct: 73 IFDFKNYMVSKASAVNKALDDAVSLREPQKIHEAMRYSLLAGGKRVRPVLCVAACELVGG 132
Query: 355 EESTAMPFACAVEMLHVMSLVHDDLPCI 438
EE+TAMP ACA+EM+H MSL+HDDLPC+
Sbjct: 133 EEATAMPAACAIEMIHTMSLIHDDLPCM 160
>gb|ACA21461.1| geranylgeranyl diphosphate synthase 5 [Picea abies]
gi|224285639|gb|ACN40538.1| unknown [Picea sitchensis]
Length = 382
Score = 126 bits (316), Expect = 3e-27
Identities = 63/113 (55%), Positives = 80/113 (70%), Gaps = 5/113 (4%)
Frame = +1
Query: 115 LLPGVRCASSAPEAV-----AHETDLFDLKRYMTEKARRVDDSLDRALPLRHPERLLAAM 279
L+ RC+S+ + E FD K Y+ KA V+++LDRA+ LR+PE++ AM
Sbjct: 62 LVSSSRCSSTIAQLANLREEVKEVIKFDFKEYLLSKAMAVNEALDRAVQLRYPEKIHEAM 121
Query: 280 RYSLLAPGKRVRPVLTLAACELVGGEESTAMPFACAVEMLHVMSLVHDDLPCI 438
RYSLLA GKRVRPVL +AACELVGG E AMP ACA+EM+H MSL+HDDLPC+
Sbjct: 122 RYSLLAGGKRVRPVLCIAACELVGGTEKLAMPTACAMEMIHTMSLIHDDLPCM 174
>ref|XP_006430614.1| hypothetical protein CICLE_v10012011mg [Citrus clementina]
gi|557532671|gb|ESR43854.1| hypothetical protein
CICLE_v10012011mg [Citrus clementina]
Length = 367
Score = 125 bits (315), Expect = 4e-27
Identities = 56/87 (64%), Positives = 71/87 (81%)
Frame = +1
Query: 178 FDLKRYMTEKARRVDDSLDRALPLRHPERLLAAMRYSLLAPGKRVRPVLTLAACELVGGE 357
F + YMT K+R+VD +LD ALP++HPE++ AMRYSLLA GKR+RPVL +A+CELVGG+
Sbjct: 75 FQFEEYMTSKSRKVDKALDEALPMQHPEKIHEAMRYSLLAGGKRIRPVLCIASCELVGGD 134
Query: 358 ESTAMPFACAVEMLHVMSLVHDDLPCI 438
ES MP ACA+EM H MSL+HDDLP +
Sbjct: 135 ESLVMPMACALEMTHTMSLIHDDLPAL 161
>gb|AAN01133.1| geranyl diphosphate synthase [Abies grandis]
Length = 383
Score = 125 bits (315), Expect = 4e-27
Identities = 60/107 (56%), Positives = 78/107 (72%)
Frame = +1
Query: 112 RLLPGVRCASSAPEAVAHETDLFDLKRYMTEKARRVDDSLDRALPLRHPERLLAAMRYSL 291
R L + S+ E + FD K Y+ KA V+++L+RA+PLR+PE++ AMRYSL
Sbjct: 67 RCLNTIAMLSNLSEQAKEKATEFDFKEYLHSKAISVNEALERAVPLRYPEKIHEAMRYSL 126
Query: 292 LAPGKRVRPVLTLAACELVGGEESTAMPFACAVEMLHVMSLVHDDLP 432
LA GKR+RP+LT+AACELVGG E AMP ACA+EM+H MSL+HDDLP
Sbjct: 127 LAGGKRIRPILTIAACELVGGSEELAMPTACAMEMIHTMSLIHDDLP 173
>gb|EOY03943.1| Geranylgeranyl pyrophosphate synthase 1 [Theobroma cacao]
Length = 361
Score = 125 bits (314), Expect = 6e-27
Identities = 61/119 (51%), Positives = 84/119 (70%), Gaps = 8/119 (6%)
Frame = +1
Query: 106 PRRLLPGVRCASSAPEAVAHETDL--------FDLKRYMTEKARRVDDSLDRALPLRHPE 261
PR++ +S P+A + + F+ + YM +K +RV+ +L +A+PL+HP
Sbjct: 36 PRKIQASQIANASLPQAFVSKDGMSNSDPLPAFNFEEYMADKGQRVNKALIKAVPLKHPM 95
Query: 262 RLLAAMRYSLLAPGKRVRPVLTLAACELVGGEESTAMPFACAVEMLHVMSLVHDDLPCI 438
++ AMRYSLLA GKRVRP+L +AACELVGGEE+ AMP ACAVEM+H MSL+HDDLPC+
Sbjct: 96 QIHEAMRYSLLAGGKRVRPILCIAACELVGGEETLAMPVACAVEMIHTMSLIHDDLPCM 154
>ref|XP_002869021.1| hypothetical protein ARALYDRAFT_490952 [Arabidopsis lyrata subsp.
lyrata] gi|297314857|gb|EFH45280.1| hypothetical protein
ARALYDRAFT_490952 [Arabidopsis lyrata subsp. lyrata]
Length = 379
Score = 125 bits (314), Expect = 6e-27
Identities = 61/91 (67%), Positives = 71/91 (78%)
Frame = +1
Query: 166 ETDLFDLKRYMTEKARRVDDSLDRALPLRHPERLLAAMRYSLLAPGKRVRPVLTLAACEL 345
E FD Y+ KA V+ +LD A+PLR P ++ AMRYSLLA GKRVRPVL +AACEL
Sbjct: 78 EPSSFDFMSYIITKAESVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACEL 137
Query: 346 VGGEESTAMPFACAVEMLHVMSLVHDDLPCI 438
VGGEESTAMP ACAVEM+H MSL+HDDLPC+
Sbjct: 138 VGGEESTAMPAACAVEMIHTMSLIHDDLPCM 168
>ref|NP_195399.1| geranylgeranyl pyrophosphate synthase 1 [Arabidopsis thaliana]
gi|13432144|sp|P34802.2|GGPP1_ARATH RecName:
Full=Heterodimeric geranylgeranyl pyrophosphate synthase
large subunit 1, chloroplastic; Short=GGPP synthase 1;
Short=GGPS1; AltName: Full=(2E,6E)-farnesyl diphosphate
synthase 1; AltName: Full=Dimethylallyltranstransferase
1; AltName: Full=Farnesyl diphosphate synthase 1;
AltName: Full=Farnesyltranstransferase 1; AltName:
Full=Geranyltranstransferase 1; Flags: Precursor
gi|2464899|emb|CAB16803.1| geranylgeranyl pyrophosphate
synthase [Arabidopsis thaliana]
gi|7270630|emb|CAB80347.1| geranylgeranyl pyrophosphate
synthase [Arabidopsis thaliana]
gi|110742524|dbj|BAE99179.1| geranylgeranyl
pyrophosphate synthase [Arabidopsis thaliana]
gi|332661305|gb|AEE86705.1| geranylgeranyl pyrophosphate
synthase 1 [Arabidopsis thaliana]
Length = 371
Score = 125 bits (313), Expect = 8e-27
Identities = 61/91 (67%), Positives = 71/91 (78%)
Frame = +1
Query: 166 ETDLFDLKRYMTEKARRVDDSLDRALPLRHPERLLAAMRYSLLAPGKRVRPVLTLAACEL 345
E FD Y+ KA V+ +LD A+PLR P ++ AMRYSLLA GKRVRPVL +AACEL
Sbjct: 70 EPSSFDFMSYIITKAELVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACEL 129
Query: 346 VGGEESTAMPFACAVEMLHVMSLVHDDLPCI 438
VGGEESTAMP ACAVEM+H MSL+HDDLPC+
Sbjct: 130 VGGEESTAMPAACAVEMIHTMSLIHDDLPCM 160
>gb|AAM65107.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
Length = 371
Score = 125 bits (313), Expect = 8e-27
Identities = 61/91 (67%), Positives = 71/91 (78%)
Frame = +1
Query: 166 ETDLFDLKRYMTEKARRVDDSLDRALPLRHPERLLAAMRYSLLAPGKRVRPVLTLAACEL 345
E FD Y+ KA V+ +LD A+PLR P ++ AMRYSLLA GKRVRPVL +AACEL
Sbjct: 70 EPSSFDFMSYIITKAELVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACEL 129
Query: 346 VGGEESTAMPFACAVEMLHVMSLVHDDLPCI 438
VGGEESTAMP ACAVEM+H MSL+HDDLPC+
Sbjct: 130 VGGEESTAMPAACAVEMIHTMSLIHDDLPCM 160
>ref|XP_006482129.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Citrus sinensis]
Length = 367
Score = 124 bits (312), Expect = 1e-26
Identities = 55/87 (63%), Positives = 71/87 (81%)
Frame = +1
Query: 178 FDLKRYMTEKARRVDDSLDRALPLRHPERLLAAMRYSLLAPGKRVRPVLTLAACELVGGE 357
F + YMT K+++VD +LD ALP++HPE++ AMRYSLLA GKR+RPVL +A+CELVGG+
Sbjct: 75 FQFEEYMTSKSKKVDKALDEALPMQHPEKIHEAMRYSLLAGGKRIRPVLCIASCELVGGD 134
Query: 358 ESTAMPFACAVEMLHVMSLVHDDLPCI 438
ES MP ACA+EM H MSL+HDDLP +
Sbjct: 135 ESLVMPMACALEMTHTMSLIHDDLPAL 161