BLASTX nr result

ID: Zingiber24_contig00048385 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00048385
         (334 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004976624.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-...    71   1e-10
tpg|DAA36278.1| TPA: putative RING zinc finger domain superfamil...    70   3e-10
dbj|BAJ96399.1| predicted protein [Hordeum vulgare subsp. vulgare]     70   3e-10
ref|NP_001151920.1| RING-H2 finger protein ATL3J [Zea mays] gi|1...    70   3e-10
gb|AFW59092.1| putative RING zinc finger domain superfamily prot...    70   4e-10
ref|XP_004953491.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-...    68   1e-09
ref|XP_003581575.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-...    68   1e-09
ref|XP_002454457.1| hypothetical protein SORBIDRAFT_04g031430 [S...    68   1e-09
dbj|BAJ87480.1| predicted protein [Hordeum vulgare subsp. vulgare]     67   2e-09
ref|NP_001130589.1| uncharacterized LOC100191688 [Zea mays] gi|1...    67   2e-09
dbj|BAD07666.1| putative RING finger 1 [Oryza sativa Japonica Gr...    67   3e-09
gb|EAY87120.1| hypothetical protein OsI_08522 [Oryza sativa Indi...    67   3e-09
ref|NP_001047780.1| Os02g0688800 [Oryza sativa Japonica Group] g...    67   3e-09
ref|XP_002447001.1| hypothetical protein SORBIDRAFT_06g026740 [S...    65   9e-09
ref|XP_006652708.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-...    65   1e-08
ref|XP_004964165.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-...    65   1e-08
ref|XP_003572836.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-...    65   1e-08
gb|EEE50592.1| hypothetical protein OsJ_30770 [Oryza sativa Japo...    65   1e-08
ref|NP_001053687.1| Os04g0586700 [Oryza sativa Japonica Group] g...    65   1e-08
ref|XP_004983612.1| PREDICTED: E3 ubiquitin-protein ligase Os03g...    62   6e-08

>ref|XP_004976624.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-like [Setaria italica]
          Length = 380

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 32/41 (78%), Positives = 38/41 (92%)
 Frame = -2

Query: 123 LIDTLPVFTLASALSSLPKSTPDCAVCLCPFRPDDELRLLP 1
           LID+LP+FT+ASAL++LPKS+PDCAVCL PF PD ELRLLP
Sbjct: 118 LIDSLPLFTMASALAALPKSSPDCAVCLSPFTPDAELRLLP 158


>tpg|DAA36278.1| TPA: putative RING zinc finger domain superfamily protein [Zea
           mays]
          Length = 397

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 31/41 (75%), Positives = 38/41 (92%)
 Frame = -2

Query: 123 LIDTLPVFTLASALSSLPKSTPDCAVCLCPFRPDDELRLLP 1
           LID+LP+FT+ASAL++LPKS+PDCAVCL PF PD +LRLLP
Sbjct: 124 LIDSLPLFTMASALAALPKSSPDCAVCLSPFTPDADLRLLP 164


>dbj|BAJ96399.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 342

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 31/42 (73%), Positives = 39/42 (92%)
 Frame = -2

Query: 126 ELIDTLPVFTLASALSSLPKSTPDCAVCLCPFRPDDELRLLP 1
           +LID+LP FT+ASAL++LP+S+PDCAVCL PFRP+ ELRLLP
Sbjct: 74  DLIDSLPRFTMASALAALPRSSPDCAVCLSPFRPEAELRLLP 115


>ref|NP_001151920.1| RING-H2 finger protein ATL3J [Zea mays] gi|195651079|gb|ACG45007.1|
           RING-H2 finger protein ATL3J [Zea mays]
          Length = 397

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 31/41 (75%), Positives = 38/41 (92%)
 Frame = -2

Query: 123 LIDTLPVFTLASALSSLPKSTPDCAVCLCPFRPDDELRLLP 1
           LID+LP+FT+ASAL++LPKS+PDCAVCL PF PD +LRLLP
Sbjct: 122 LIDSLPLFTMASALAALPKSSPDCAVCLSPFTPDADLRLLP 162


>gb|AFW59092.1| putative RING zinc finger domain superfamily protein [Zea mays]
          Length = 372

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 32/41 (78%), Positives = 37/41 (90%)
 Frame = -2

Query: 123 LIDTLPVFTLASALSSLPKSTPDCAVCLCPFRPDDELRLLP 1
           LID+LP+FT+ASAL+SLP S+PDCAVCL PF PD ELRLLP
Sbjct: 120 LIDSLPLFTMASALASLPGSSPDCAVCLSPFAPDAELRLLP 160


>ref|XP_004953491.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-like [Setaria italica]
          Length = 402

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 31/41 (75%), Positives = 37/41 (90%)
 Frame = -2

Query: 123 LIDTLPVFTLASALSSLPKSTPDCAVCLCPFRPDDELRLLP 1
           LI +LP+FT+ASAL++LPKS+PDCAVCL PF PD ELRLLP
Sbjct: 132 LIASLPLFTMASALAALPKSSPDCAVCLSPFSPDAELRLLP 172


>ref|XP_003581575.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-like [Brachypodium
           distachyon]
          Length = 359

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 31/41 (75%), Positives = 37/41 (90%)
 Frame = -2

Query: 123 LIDTLPVFTLASALSSLPKSTPDCAVCLCPFRPDDELRLLP 1
           LI++LP FT+ASAL++LPKS+PDCAVCL PF PD ELRLLP
Sbjct: 101 LIESLPRFTMASALAALPKSSPDCAVCLSPFTPDAELRLLP 141


>ref|XP_002454457.1| hypothetical protein SORBIDRAFT_04g031430 [Sorghum bicolor]
           gi|241934288|gb|EES07433.1| hypothetical protein
           SORBIDRAFT_04g031430 [Sorghum bicolor]
          Length = 400

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 31/41 (75%), Positives = 37/41 (90%)
 Frame = -2

Query: 123 LIDTLPVFTLASALSSLPKSTPDCAVCLCPFRPDDELRLLP 1
           LI +LP+FT+ASAL++LPKS+PDCAVCL PF PD ELRLLP
Sbjct: 128 LIASLPLFTMASALAALPKSSPDCAVCLSPFSPDAELRLLP 168


>dbj|BAJ87480.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 373

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 31/41 (75%), Positives = 37/41 (90%)
 Frame = -2

Query: 123 LIDTLPVFTLASALSSLPKSTPDCAVCLCPFRPDDELRLLP 1
           LI +LP+FT+ASAL++LPKS+PDCAVCL PF PD ELRLLP
Sbjct: 128 LIASLPLFTMASALAALPKSSPDCAVCLSPFVPDAELRLLP 168


>ref|NP_001130589.1| uncharacterized LOC100191688 [Zea mays] gi|194689566|gb|ACF78867.1|
           unknown [Zea mays] gi|194707760|gb|ACF87964.1| unknown
           [Zea mays] gi|413938299|gb|AFW72850.1| putative RING
           zinc finger domain superfamily protein [Zea mays]
          Length = 378

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 30/41 (73%), Positives = 37/41 (90%)
 Frame = -2

Query: 123 LIDTLPVFTLASALSSLPKSTPDCAVCLCPFRPDDELRLLP 1
           LI +LP+FT+ASAL++LPKS+PDCAVCL PF PD +LRLLP
Sbjct: 121 LIASLPLFTMASALAALPKSSPDCAVCLSPFSPDADLRLLP 161


>dbj|BAD07666.1| putative RING finger 1 [Oryza sativa Japonica Group]
          Length = 502

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 30/41 (73%), Positives = 37/41 (90%)
 Frame = -2

Query: 123 LIDTLPVFTLASALSSLPKSTPDCAVCLCPFRPDDELRLLP 1
           LI +LP+FT+ASAL++LPKS+PDCAVCL PF P+ ELRLLP
Sbjct: 255 LIASLPLFTMASALAALPKSSPDCAVCLSPFAPEAELRLLP 295


>gb|EAY87120.1| hypothetical protein OsI_08522 [Oryza sativa Indica Group]
          Length = 267

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 30/41 (73%), Positives = 37/41 (90%)
 Frame = -2

Query: 123 LIDTLPVFTLASALSSLPKSTPDCAVCLCPFRPDDELRLLP 1
           LI +LP+FT+ASAL++LPKS+PDCAVCL PF P+ ELRLLP
Sbjct: 20  LIASLPLFTMASALAALPKSSPDCAVCLSPFAPEAELRLLP 60


>ref|NP_001047780.1| Os02g0688800 [Oryza sativa Japonica Group]
           gi|113537311|dbj|BAF09694.1| Os02g0688800 [Oryza sativa
           Japonica Group] gi|125583300|gb|EAZ24231.1| hypothetical
           protein OsJ_07979 [Oryza sativa Japonica Group]
          Length = 373

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 30/41 (73%), Positives = 37/41 (90%)
 Frame = -2

Query: 123 LIDTLPVFTLASALSSLPKSTPDCAVCLCPFRPDDELRLLP 1
           LI +LP+FT+ASAL++LPKS+PDCAVCL PF P+ ELRLLP
Sbjct: 126 LIASLPLFTMASALAALPKSSPDCAVCLSPFAPEAELRLLP 166


>ref|XP_002447001.1| hypothetical protein SORBIDRAFT_06g026740 [Sorghum bicolor]
           gi|241938184|gb|EES11329.1| hypothetical protein
           SORBIDRAFT_06g026740 [Sorghum bicolor]
          Length = 398

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 29/41 (70%), Positives = 36/41 (87%)
 Frame = -2

Query: 123 LIDTLPVFTLASALSSLPKSTPDCAVCLCPFRPDDELRLLP 1
           LID+LP+FT+AS+L+ LPKS+PDCAVCL  F PD ELRL+P
Sbjct: 123 LIDSLPLFTMASSLAELPKSSPDCAVCLTLFTPDAELRLMP 163


>ref|XP_006652708.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-like [Oryza
           brachyantha]
          Length = 360

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 29/41 (70%), Positives = 37/41 (90%)
 Frame = -2

Query: 123 LIDTLPVFTLASALSSLPKSTPDCAVCLCPFRPDDELRLLP 1
           LI++LP+FT+AS+L++LPKS+PDCAVCL PF  D ELRLLP
Sbjct: 106 LIESLPLFTMASSLAALPKSSPDCAVCLSPFTLDAELRLLP 146


>ref|XP_004964165.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-like [Setaria italica]
          Length = 256

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 29/41 (70%), Positives = 36/41 (87%)
 Frame = -2

Query: 123 LIDTLPVFTLASALSSLPKSTPDCAVCLCPFRPDDELRLLP 1
           LI +LP+FT+ASAL++LPK++PDCAVCL PF PD  LRLLP
Sbjct: 4   LIASLPLFTMASALAALPKNSPDCAVCLSPFEPDAGLRLLP 44


>ref|XP_003572836.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-like [Brachypodium
           distachyon]
          Length = 443

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 30/41 (73%), Positives = 36/41 (87%)
 Frame = -2

Query: 123 LIDTLPVFTLASALSSLPKSTPDCAVCLCPFRPDDELRLLP 1
           LI +LP+FT+ASAL++LPKS+PDCAVCL PF  D ELRLLP
Sbjct: 189 LIASLPLFTMASALAALPKSSPDCAVCLSPFLADAELRLLP 229


>gb|EEE50592.1| hypothetical protein OsJ_30770 [Oryza sativa Japonica Group]
          Length = 321

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 29/41 (70%), Positives = 37/41 (90%)
 Frame = -2

Query: 123 LIDTLPVFTLASALSSLPKSTPDCAVCLCPFRPDDELRLLP 1
           LI++LP+FT+AS+L++LPKS+PDCAVCL PF  D ELRLLP
Sbjct: 105 LIESLPLFTMASSLAALPKSSPDCAVCLSPFTLDAELRLLP 145


>ref|NP_001053687.1| Os04g0586700 [Oryza sativa Japonica Group]
           gi|32488757|emb|CAE04310.1| OSJNBb0016D16.1 [Oryza
           sativa Japonica Group] gi|38344287|emb|CAE03770.2|
           OSJNBa0013K16.19 [Oryza sativa Japonica Group]
           gi|113565258|dbj|BAF15601.1| Os04g0586700 [Oryza sativa
           Japonica Group] gi|125549503|gb|EAY95325.1| hypothetical
           protein OsI_17152 [Oryza sativa Indica Group]
           gi|215693347|dbj|BAG88729.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 359

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 29/41 (70%), Positives = 37/41 (90%)
 Frame = -2

Query: 123 LIDTLPVFTLASALSSLPKSTPDCAVCLCPFRPDDELRLLP 1
           LI++LP+FT+AS+L++LPKS+PDCAVCL PF  D ELRLLP
Sbjct: 105 LIESLPLFTMASSLAALPKSSPDCAVCLSPFTLDAELRLLP 145


>ref|XP_004983612.1| PREDICTED: E3 ubiquitin-protein ligase Os03g0188200-like [Setaria
           italica]
          Length = 393

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 30/47 (63%), Positives = 37/47 (78%)
 Frame = -2

Query: 141 QANAVELIDTLPVFTLASALSSLPKSTPDCAVCLCPFRPDDELRLLP 1
           +A A  LI  LP+FTL+S+L+S+PKS+ DCAVC   FR DDELRLLP
Sbjct: 137 EAEAERLIARLPLFTLSSSLASVPKSSRDCAVCQSAFRDDDELRLLP 183


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