BLASTX nr result
ID: Zingiber24_contig00048343
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00048343
(250 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004306009.1| PREDICTED: pentatricopeptide repeat-containi... 97 2e-18
ref|XP_002517971.1| pentatricopeptide repeat-containing protein,... 97 2e-18
gb|EOX99345.1| Pentatricopeptide repeat (PPR) superfamily protei... 97 3e-18
gb|EMJ18275.1| hypothetical protein PRUPE_ppa000834mg [Prunus pe... 96 4e-18
ref|XP_003560231.1| PREDICTED: pentatricopeptide repeat-containi... 96 5e-18
ref|XP_002319373.2| hypothetical protein POPTR_0013s14110g [Popu... 95 8e-18
tpg|DAA62526.1| TPA: hypothetical protein ZEAMMB73_338715 [Zea m... 94 1e-17
ref|NP_001169278.1| uncharacterized protein LOC100383141 [Zea ma... 94 1e-17
gb|EXB62281.1| hypothetical protein L484_022169 [Morus notabilis] 94 2e-17
ref|XP_006491629.1| PREDICTED: pentatricopeptide repeat-containi... 94 2e-17
ref|XP_006447317.1| hypothetical protein CICLE_v10017547mg [Citr... 94 2e-17
gb|EMT09623.1| hypothetical protein F775_05869 [Aegilops tauschii] 92 7e-17
ref|XP_002462845.1| hypothetical protein SORBIDRAFT_02g033010 [S... 91 1e-16
ref|XP_002272784.1| PREDICTED: pentatricopeptide repeat-containi... 91 1e-16
emb|CAN75708.1| hypothetical protein VITISV_031421 [Vitis vinifera] 91 1e-16
ref|XP_006357522.1| PREDICTED: pentatricopeptide repeat-containi... 91 2e-16
ref|XP_004959665.1| PREDICTED: pentatricopeptide repeat-containi... 91 2e-16
ref|XP_004243803.1| PREDICTED: pentatricopeptide repeat-containi... 88 1e-15
gb|EPS73099.1| hypothetical protein M569_01654 [Genlisea aurea] 88 1e-15
ref|XP_004141647.1| PREDICTED: pentatricopeptide repeat-containi... 87 2e-15
>ref|XP_004306009.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g73710-like [Fragaria vesca subsp. vesca]
Length = 1000
Score = 97.4 bits (241), Expect = 2e-18
Identities = 46/82 (56%), Positives = 61/82 (74%)
Frame = +2
Query: 5 DKMRRRRIVPDTKTFNIFMSMYASLGNIESVLKYYHKMSESGLTPDTVSHRIILQALCER 184
+KM R I PDT+T+NIF+S+YA +GNI++ L Y K+ E GL PDTVSHR IL LCER
Sbjct: 379 NKMEERGISPDTRTYNIFLSLYADMGNIDAALDCYRKIREVGLYPDTVSHRTILHVLCER 438
Query: 185 NMVREVEDVINKIIESGEFVDE 250
NM+R+VE VI + +SG ++E
Sbjct: 439 NMIRDVEIVIEDMEKSGVSINE 460
>ref|XP_002517971.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223542953|gb|EEF44489.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 1029
Score = 97.1 bits (240), Expect = 2e-18
Identities = 46/82 (56%), Positives = 61/82 (74%)
Frame = +2
Query: 5 DKMRRRRIVPDTKTFNIFMSMYASLGNIESVLKYYHKMSESGLTPDTVSHRIILQALCER 184
+KM R + PDT+T+NIF+S+YA GNI++ +K Y K+ E GL PDTVSHR IL LCER
Sbjct: 401 NKMEDRGVSPDTRTYNIFLSLYADEGNIDAAIKCYKKIREVGLLPDTVSHRAILHELCER 460
Query: 185 NMVREVEDVINKIIESGEFVDE 250
NMV+E E +I +I +S + VDE
Sbjct: 461 NMVKEAEAIIEEIEKSSKQVDE 482
>gb|EOX99345.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao]
Length = 1007
Score = 96.7 bits (239), Expect = 3e-18
Identities = 45/81 (55%), Positives = 60/81 (74%)
Frame = +2
Query: 8 KMRRRRIVPDTKTFNIFMSMYASLGNIESVLKYYHKMSESGLTPDTVSHRIILQALCERN 187
KM + I PDTKT+NIF+S+YA GNIE+ L+YY K+ + GL PD V+HR +L LCERN
Sbjct: 389 KMEEKGIPPDTKTYNIFLSLYAGAGNIEAALEYYRKIRKVGLFPDIVTHRAVLHILCERN 448
Query: 188 MVREVEDVINKIIESGEFVDE 250
MV+EVE VI ++ + G +DE
Sbjct: 449 MVQEVETVIEEMNKFGIHIDE 469
>gb|EMJ18275.1| hypothetical protein PRUPE_ppa000834mg [Prunus persica]
Length = 987
Score = 96.3 bits (238), Expect = 4e-18
Identities = 45/81 (55%), Positives = 59/81 (72%)
Frame = +2
Query: 8 KMRRRRIVPDTKTFNIFMSMYASLGNIESVLKYYHKMSESGLTPDTVSHRIILQALCERN 187
KM R I PDT+T+NIF+S+YA GNI++ L Y K+ E GL+PD VSHR +L LCERN
Sbjct: 404 KMEERGISPDTRTYNIFLSLYADAGNIDAALNCYRKIREVGLSPDIVSHRTVLHVLCERN 463
Query: 188 MVREVEDVINKIIESGEFVDE 250
MV++VE VI + +SG +DE
Sbjct: 464 MVQDVETVIRSMEKSGVRIDE 484
>ref|XP_003560231.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g73710-like [Brachypodium distachyon]
Length = 922
Score = 95.9 bits (237), Expect = 5e-18
Identities = 41/75 (54%), Positives = 59/75 (78%)
Frame = +2
Query: 20 RRIVPDTKTFNIFMSMYASLGNIESVLKYYHKMSESGLTPDTVSHRIILQALCERNMVRE 199
R + PD KT+N+ M+++AS+G++E VLKYYH++ +GL D VS+R++LQ LCER MVRE
Sbjct: 336 RGVTPDIKTYNVMMTVFASMGDVEGVLKYYHQIGRTGLCADVVSYRVVLQVLCERKMVRE 395
Query: 200 VEDVINKIIESGEFV 244
EDVI +I++SG V
Sbjct: 396 AEDVIEEIMQSGTCV 410
>ref|XP_002319373.2| hypothetical protein POPTR_0013s14110g [Populus trichocarpa]
gi|550325820|gb|EEE95296.2| hypothetical protein
POPTR_0013s14110g [Populus trichocarpa]
Length = 965
Score = 95.1 bits (235), Expect = 8e-18
Identities = 46/81 (56%), Positives = 58/81 (71%)
Frame = +2
Query: 5 DKMRRRRIVPDTKTFNIFMSMYASLGNIESVLKYYHKMSESGLTPDTVSHRIILQALCER 184
DKM RRI PDT+T+NIF+S+YA GNI + L+ Y K+ GL PD VSHR IL LC R
Sbjct: 346 DKMEERRISPDTRTYNIFLSLYADAGNINAALECYWKIRNVGLVPDIVSHRTILHILCGR 405
Query: 185 NMVREVEDVINKIIESGEFVD 247
NMVREVE VI ++ +S + +D
Sbjct: 406 NMVREVEAVIEEMKKSSQKID 426
>tpg|DAA62526.1| TPA: hypothetical protein ZEAMMB73_338715 [Zea mays]
Length = 901
Score = 94.4 bits (233), Expect = 1e-17
Identities = 43/83 (51%), Positives = 62/83 (74%)
Frame = +2
Query: 2 FDKMRRRRIVPDTKTFNIFMSMYASLGNIESVLKYYHKMSESGLTPDTVSHRIILQALCE 181
F M R + PDTKT+N+ M+++AS+G++E VLKYY ++ +GL PD V++RI+LQ LCE
Sbjct: 322 FASMVIRGVKPDTKTYNVMMTVFASIGDLEGVLKYYCQIRNAGLHPDAVTYRILLQVLCE 381
Query: 182 RNMVREVEDVINKIIESGEFVDE 250
R MV + EDVI I+++G FV E
Sbjct: 382 RKMVHKAEDVIEGILKAGSFVHE 404
>ref|NP_001169278.1| uncharacterized protein LOC100383141 [Zea mays]
gi|224028343|gb|ACN33247.1| unknown [Zea mays]
Length = 901
Score = 94.4 bits (233), Expect = 1e-17
Identities = 43/83 (51%), Positives = 62/83 (74%)
Frame = +2
Query: 2 FDKMRRRRIVPDTKTFNIFMSMYASLGNIESVLKYYHKMSESGLTPDTVSHRIILQALCE 181
F M R + PDTKT+N+ M+++AS+G++E VLKYY ++ +GL PD V++RI+LQ LCE
Sbjct: 322 FASMVIRGVKPDTKTYNVMMTVFASIGDLEGVLKYYCQIRNAGLHPDAVTYRILLQVLCE 381
Query: 182 RNMVREVEDVINKIIESGEFVDE 250
R MV + EDVI I+++G FV E
Sbjct: 382 RKMVHKAEDVIEGILKAGSFVHE 404
>gb|EXB62281.1| hypothetical protein L484_022169 [Morus notabilis]
Length = 1018
Score = 94.0 bits (232), Expect = 2e-17
Identities = 44/81 (54%), Positives = 60/81 (74%)
Frame = +2
Query: 8 KMRRRRIVPDTKTFNIFMSMYASLGNIESVLKYYHKMSESGLTPDTVSHRIILQALCERN 187
KM RRI PDTKT+NIF+S+YA +G+I+ L+ Y K+ + GL PD V+HR +L LC+RN
Sbjct: 397 KMEERRISPDTKTYNIFLSLYAEVGDIDKSLECYRKIRDVGLYPDLVTHRAVLHVLCQRN 456
Query: 188 MVREVEDVINKIIESGEFVDE 250
MVR+VE VI + +SG +DE
Sbjct: 457 MVRDVEIVIEDMEKSGVRIDE 477
>ref|XP_006491629.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g73710-like [Citrus sinensis]
Length = 1004
Score = 93.6 bits (231), Expect = 2e-17
Identities = 45/83 (54%), Positives = 60/83 (72%)
Frame = +2
Query: 2 FDKMRRRRIVPDTKTFNIFMSMYASLGNIESVLKYYHKMSESGLTPDTVSHRIILQALCE 181
F M RRI PDTKT+NIF+S+YA +GNI + L+YY K+ E GL PD+V+ R IL LC+
Sbjct: 384 FCMMEERRISPDTKTYNIFLSLYADVGNINAALRYYWKIREVGLFPDSVTQRAILHILCQ 443
Query: 182 RNMVREVEDVINKIIESGEFVDE 250
RNMV+E E VI ++ + G +DE
Sbjct: 444 RNMVQEAEAVIIEMEKCGLHIDE 466
>ref|XP_006447317.1| hypothetical protein CICLE_v10017547mg [Citrus clementina]
gi|557549928|gb|ESR60557.1| hypothetical protein
CICLE_v10017547mg [Citrus clementina]
Length = 962
Score = 93.6 bits (231), Expect = 2e-17
Identities = 45/83 (54%), Positives = 60/83 (72%)
Frame = +2
Query: 2 FDKMRRRRIVPDTKTFNIFMSMYASLGNIESVLKYYHKMSESGLTPDTVSHRIILQALCE 181
F M RRI PDTKT+NIF+S+YA +GNI + L+YY K+ E GL PD+V+ R IL LC+
Sbjct: 384 FCMMEERRISPDTKTYNIFLSLYADVGNINAALRYYWKIREVGLFPDSVTQRAILHILCQ 443
Query: 182 RNMVREVEDVINKIIESGEFVDE 250
RNMV+E E VI ++ + G +DE
Sbjct: 444 RNMVQEAEAVIIEMEKCGLHIDE 466
>gb|EMT09623.1| hypothetical protein F775_05869 [Aegilops tauschii]
Length = 851
Score = 92.0 bits (227), Expect = 7e-17
Identities = 42/77 (54%), Positives = 56/77 (72%)
Frame = +2
Query: 20 RRIVPDTKTFNIFMSMYASLGNIESVLKYYHKMSESGLTPDTVSHRIILQALCERNMVRE 199
R I PD +T+N+ M ++AS+G+ E VLKYYH++ GL D VS+RI+LQ LCER +VRE
Sbjct: 261 RGITPDIRTYNVMMMLFASMGDAEGVLKYYHQIGRIGLCADAVSYRIVLQVLCERKLVRE 320
Query: 200 VEDVINKIIESGEFVDE 250
EDVI II+SG + E
Sbjct: 321 AEDVIEGIIKSGTSIHE 337
>ref|XP_002462845.1| hypothetical protein SORBIDRAFT_02g033010 [Sorghum bicolor]
gi|241926222|gb|EER99366.1| hypothetical protein
SORBIDRAFT_02g033010 [Sorghum bicolor]
Length = 798
Score = 91.3 bits (225), Expect = 1e-16
Identities = 43/83 (51%), Positives = 61/83 (73%)
Frame = +2
Query: 2 FDKMRRRRIVPDTKTFNIFMSMYASLGNIESVLKYYHKMSESGLTPDTVSHRIILQALCE 181
F M R + PDTKT+N+ M+++AS+G++E VLKYY+++ ++ L PD VS+RI+LQ LCE
Sbjct: 243 FASMMVRGVKPDTKTYNVMMTVFASIGDLERVLKYYYQIGKACLHPDAVSYRILLQLLCE 302
Query: 182 RNMVREVEDVINKIIESGEFVDE 250
R M EVED+I I+ SG V E
Sbjct: 303 RKMAHEVEDLIEGILSSGCSVHE 325
>ref|XP_002272784.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g73710-like [Vitis vinifera]
Length = 1008
Score = 91.3 bits (225), Expect = 1e-16
Identities = 46/81 (56%), Positives = 57/81 (70%)
Frame = +2
Query: 8 KMRRRRIVPDTKTFNIFMSMYASLGNIESVLKYYHKMSESGLTPDTVSHRIILQALCERN 187
+M R I PDTKT+NIF+S+YA GNI++ LK Y K+ E GL PD V+HR +L LCERN
Sbjct: 405 EMEERGISPDTKTYNIFLSLYADGGNIDAALKCYRKIREVGLFPDVVTHRAVLHVLCERN 464
Query: 188 MVREVEDVINKIIESGEFVDE 250
MV EVE VI ++ S VDE
Sbjct: 465 MVGEVETVIAEMKRSRVRVDE 485
>emb|CAN75708.1| hypothetical protein VITISV_031421 [Vitis vinifera]
Length = 1313
Score = 91.3 bits (225), Expect = 1e-16
Identities = 46/81 (56%), Positives = 57/81 (70%)
Frame = +2
Query: 8 KMRRRRIVPDTKTFNIFMSMYASLGNIESVLKYYHKMSESGLTPDTVSHRIILQALCERN 187
+M R I PDTKT+NIF+S+YA GNI++ LK Y K+ E GL PD V+HR +L LCERN
Sbjct: 710 EMEERGISPDTKTYNIFLSLYADGGNIDAALKCYRKIREVGLFPDVVTHRAVLHVLCERN 769
Query: 188 MVREVEDVINKIIESGEFVDE 250
MV EVE VI ++ S VDE
Sbjct: 770 MVGEVETVIAEMKRSRVRVDE 790
>ref|XP_006357522.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g73710-like isoform X1 [Solanum tuberosum]
gi|565382385|ref|XP_006357523.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g73710-like isoform X2 [Solanum tuberosum]
Length = 1012
Score = 90.5 bits (223), Expect = 2e-16
Identities = 41/82 (50%), Positives = 62/82 (75%)
Frame = +2
Query: 5 DKMRRRRIVPDTKTFNIFMSMYASLGNIESVLKYYHKMSESGLTPDTVSHRIILQALCER 184
+KM R I PDTKT+NIF+S+YA+ G I+ L++Y K+ +GL PD V+ R I++ LC++
Sbjct: 388 NKMEERGISPDTKTYNIFLSLYANAGKIDRALQWYRKIRRTGLFPDAVTCRAIIRTLCKQ 447
Query: 185 NMVREVEDVINKIIESGEFVDE 250
NMV+EVE+VI++I G ++DE
Sbjct: 448 NMVQEVENVISEIESLGMYIDE 469
>ref|XP_004959665.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g73710-like [Setaria italica]
Length = 911
Score = 90.5 bits (223), Expect = 2e-16
Identities = 44/83 (53%), Positives = 60/83 (72%)
Frame = +2
Query: 2 FDKMRRRRIVPDTKTFNIFMSMYASLGNIESVLKYYHKMSESGLTPDTVSHRIILQALCE 181
F M R I PDTKTFN+ M+++AS+G+++ +LKYY ++ ++GL D VS RI+L+ALCE
Sbjct: 321 FANMVVRGINPDTKTFNVMMTVFASIGDLDGILKYYRQIGKAGLHVDAVSSRIMLRALCE 380
Query: 182 RNMVREVEDVINKIIESGEFVDE 250
R MV E EDVI I+ SG V E
Sbjct: 381 RKMVHEAEDVIEGILNSGGSVHE 403
>ref|XP_004243803.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g73710-like [Solanum lycopersicum]
Length = 1014
Score = 88.2 bits (217), Expect = 1e-15
Identities = 40/82 (48%), Positives = 61/82 (74%)
Frame = +2
Query: 5 DKMRRRRIVPDTKTFNIFMSMYASLGNIESVLKYYHKMSESGLTPDTVSHRIILQALCER 184
+KM R I PDTKT+NIF+S+YA+ I+ L++Y K+ +GL PD V+ R I++ LC++
Sbjct: 388 NKMEERGISPDTKTYNIFLSLYANAAKIDRALQWYRKIRRTGLFPDAVTCRAIIRTLCKQ 447
Query: 185 NMVREVEDVINKIIESGEFVDE 250
NMV+EVE+VI++I G ++DE
Sbjct: 448 NMVQEVENVISEIESLGMYIDE 469
>gb|EPS73099.1| hypothetical protein M569_01654 [Genlisea aurea]
Length = 1119
Score = 87.8 bits (216), Expect = 1e-15
Identities = 44/82 (53%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
Frame = +2
Query: 8 KMRRRRIVPDTKTFNIFMSMYASLGNIESVLKYYHKMSESGLTPDTVSHRIILQALCERN 187
+M R I PDTKT+NIF+++YA GNIE+ L+ Y + E+GL PD V+ R L+ LCERN
Sbjct: 521 EMEERGIEPDTKTYNIFITLYAESGNIEAALRSYRMIRETGLLPDEVTRRTTLRILCERN 580
Query: 188 MVREVEDVINKIIES-GEFVDE 250
MV+EVED+I + E G+ VDE
Sbjct: 581 MVQEVEDLIRETEEEFGDRVDE 602
>ref|XP_004141647.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g73710-like [Cucumis sativus]
Length = 1020
Score = 87.4 bits (215), Expect = 2e-15
Identities = 42/81 (51%), Positives = 58/81 (71%)
Frame = +2
Query: 8 KMRRRRIVPDTKTFNIFMSMYASLGNIESVLKYYHKMSESGLTPDTVSHRIILQALCERN 187
KM R + PDTKT+NIF+S+YA+ GNI+ LK Y ++ E GL PD V+HR +L L ERN
Sbjct: 381 KMEERGLSPDTKTYNIFLSLYANNGNIDGALKCYRRIREVGLFPDVVTHRALLHVLSERN 440
Query: 188 MVREVEDVINKIIESGEFVDE 250
MV +VE+VI ++ +S +DE
Sbjct: 441 MVEDVENVIAEMEKSHILLDE 461