BLASTX nr result
ID: Zingiber24_contig00048342
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00048342
(340 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004970174.1| PREDICTED: uncharacterized protein LOC101754... 88 1e-15
gb|EMT15208.1| DNA polymerase III subunit gamma/tau [Aegilops ta... 84 1e-14
gb|EMS61249.1| DNA polymerase III subunit gamma/tau [Triticum ur... 84 1e-14
ref|XP_002458591.1| hypothetical protein SORBIDRAFT_03g036320 [S... 84 1e-14
dbj|BAK02414.1| predicted protein [Hordeum vulgare subsp. vulgare] 83 4e-14
tpg|DAA57372.1| TPA: hypothetical protein ZEAMMB73_111215 [Zea m... 82 7e-14
dbj|BAJ97476.1| predicted protein [Hordeum vulgare subsp. vulgare] 82 1e-13
ref|XP_006662851.1| PREDICTED: protein STICHEL-like [Oryza brach... 79 5e-13
gb|AAX95843.1| hypothetical protein LOC_Os11g13990 [Oryza sativa... 79 5e-13
ref|XP_003577650.1| PREDICTED: uncharacterized protein LOC100846... 77 3e-12
gb|AFW56629.1| hypothetical protein ZEAMMB73_394019 [Zea mays] 75 9e-12
ref|XP_006663905.1| PREDICTED: protein STICHEL-like [Oryza brach... 74 2e-11
ref|XP_002443025.1| hypothetical protein SORBIDRAFT_08g006520 [S... 72 6e-11
ref|NP_001066394.1| Os12g0209300 [Oryza sativa Japonica Group] g... 67 3e-09
gb|EAY82580.1| hypothetical protein OsI_37801 [Oryza sativa Indi... 67 3e-09
ref|XP_003576959.1| PREDICTED: uncharacterized protein LOC100826... 65 7e-09
>ref|XP_004970174.1| PREDICTED: uncharacterized protein LOC101754619 [Setaria italica]
Length = 1175
Score = 87.8 bits (216), Expect = 1e-15
Identities = 55/114 (48%), Positives = 73/114 (64%), Gaps = 1/114 (0%)
Frame = -1
Query: 340 SKARKGVDNHAAISKLLDIRSTSLAFVNSAEQSDDTENCNSEDLPQLKHALSRWTVHCSR 161
S ++KG ++ +SKLLD+ VNS EQS+DTEN NSE+ QL+ A + SR
Sbjct: 162 SFSKKGAMRNSTVSKLLDLH------VNSGEQSEDTENYNSENHEQLQKA-----GYFSR 210
Query: 160 SASPLFSDSGFGNLSYSSKISRMMRRQESS-SCTPASTNSYYKFGTHNPSVVDS 2
S SPLF+ SG + S SK+ R+ RR+ SS SCTP ST+SYY++ NPS V S
Sbjct: 211 STSPLFAASGCFSSSNPSKLLRVPRREGSSFSCTPVSTSSYYRYKGRNPSTVGS 264
>gb|EMT15208.1| DNA polymerase III subunit gamma/tau [Aegilops tauschii]
Length = 1158
Score = 84.3 bits (207), Expect = 1e-14
Identities = 53/114 (46%), Positives = 71/114 (62%), Gaps = 1/114 (0%)
Frame = -1
Query: 340 SKARKGVDNHAAISKLLDIRSTSLAFVNSAEQSDDTENCNSEDLPQLKHALSRWTVHCSR 161
S ++KG ++ +SKLLD+ VNS EQS+DTE NSE+ H L + + SR
Sbjct: 153 SFSKKGAMRNSTVSKLLDLH------VNSGEQSEDTETYNSEN-----HELLQKGGYFSR 201
Query: 160 SASPLFSDSGFGNLSYSSKISRMMRRQESS-SCTPASTNSYYKFGTHNPSVVDS 2
S SPLF+ SG + S SK+ +M RR+ SS SCTP ST+SYY++ NPS V S
Sbjct: 202 STSPLFAASGCLSSSNPSKLLKMARREGSSFSCTPVSTSSYYRYRGRNPSTVGS 255
>gb|EMS61249.1| DNA polymerase III subunit gamma/tau [Triticum urartu]
Length = 1103
Score = 84.3 bits (207), Expect = 1e-14
Identities = 53/114 (46%), Positives = 71/114 (62%), Gaps = 1/114 (0%)
Frame = -1
Query: 340 SKARKGVDNHAAISKLLDIRSTSLAFVNSAEQSDDTENCNSEDLPQLKHALSRWTVHCSR 161
S ++KG ++ +SKLLD+ VNS EQS+DTE NSE+ H L + + SR
Sbjct: 153 SFSKKGAMRNSTVSKLLDLH------VNSGEQSEDTETYNSEN-----HELLQKGGYFSR 201
Query: 160 SASPLFSDSGFGNLSYSSKISRMMRRQESS-SCTPASTNSYYKFGTHNPSVVDS 2
S SPLF+ SG + S SK+ +M RR+ SS SCTP ST+SYY++ NPS V S
Sbjct: 202 STSPLFAASGCLSSSNPSKLLKMARREGSSFSCTPVSTSSYYRYRGRNPSTVGS 255
>ref|XP_002458591.1| hypothetical protein SORBIDRAFT_03g036320 [Sorghum bicolor]
gi|241930566|gb|EES03711.1| hypothetical protein
SORBIDRAFT_03g036320 [Sorghum bicolor]
Length = 1176
Score = 84.3 bits (207), Expect = 1e-14
Identities = 53/114 (46%), Positives = 71/114 (62%), Gaps = 1/114 (0%)
Frame = -1
Query: 340 SKARKGVDNHAAISKLLDIRSTSLAFVNSAEQSDDTENCNSEDLPQLKHALSRWTVHCSR 161
S ++KG ++ +SKLLD+ VNS EQS+DTEN NSE QL+ + SR
Sbjct: 162 SFSKKGAMRNSTVSKLLDLH------VNSGEQSEDTENYNSETHEQLQKV-----GYFSR 210
Query: 160 SASPLFSDSGFGNLSYSSKISRMMRRQESS-SCTPASTNSYYKFGTHNPSVVDS 2
S SPLF+ SG + + SK+ R+ RR+ SS SCTP ST+SYY++ NPS V S
Sbjct: 211 STSPLFAASGCFSSTNPSKLLRVPRREGSSFSCTPVSTSSYYRYKGRNPSTVGS 264
>dbj|BAK02414.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1174
Score = 82.8 bits (203), Expect = 4e-14
Identities = 53/114 (46%), Positives = 70/114 (61%), Gaps = 1/114 (0%)
Frame = -1
Query: 340 SKARKGVDNHAAISKLLDIRSTSLAFVNSAEQSDDTENCNSEDLPQLKHALSRWTVHCSR 161
S ++KG ++ +SKLLD+ VNS EQS+DTE NSE+ H L + + SR
Sbjct: 156 SFSKKGAMRNSTVSKLLDLH------VNSGEQSEDTETYNSEN-----HELLQKGGYFSR 204
Query: 160 SASPLFSDSGFGNLSYSSKISRMMRRQESS-SCTPASTNSYYKFGTHNPSVVDS 2
S SPLF+ SG + S SK+ +M RR+ SS SCTP ST+SYY+ NPS V S
Sbjct: 205 STSPLFAASGCLSSSNPSKLLKMARREGSSFSCTPVSTSSYYRHRGRNPSTVGS 258
>tpg|DAA57372.1| TPA: hypothetical protein ZEAMMB73_111215 [Zea mays]
Length = 1220
Score = 82.0 bits (201), Expect = 7e-14
Identities = 52/114 (45%), Positives = 70/114 (61%), Gaps = 1/114 (0%)
Frame = -1
Query: 340 SKARKGVDNHAAISKLLDIRSTSLAFVNSAEQSDDTENCNSEDLPQLKHALSRWTVHCSR 161
S ++KG ++ +SKLLD+ VNSAEQS+DTEN NSE L+ + S
Sbjct: 208 SFSKKGAMRNSTVSKLLDLH------VNSAEQSEDTENYNSETHEHLQKV-----GYFSH 256
Query: 160 SASPLFSDSGFGNLSYSSKISRMMRRQESS-SCTPASTNSYYKFGTHNPSVVDS 2
S SPLF+ SG + + SK+ R+ RR+ SS SCTP ST+SYY++ NPS V S
Sbjct: 257 STSPLFAASGCFSSTNPSKLLRVPRREGSSFSCTPVSTSSYYRYKGRNPSTVGS 310
>dbj|BAJ97476.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1174
Score = 81.6 bits (200), Expect = 1e-13
Identities = 52/114 (45%), Positives = 70/114 (61%), Gaps = 1/114 (0%)
Frame = -1
Query: 340 SKARKGVDNHAAISKLLDIRSTSLAFVNSAEQSDDTENCNSEDLPQLKHALSRWTVHCSR 161
S ++KG ++ +SKLLD+ + NS EQS+DTE NSE+ H L + + SR
Sbjct: 156 SFSKKGAMRNSTVSKLLDLHA------NSGEQSEDTETYNSEN-----HELLQKGGYFSR 204
Query: 160 SASPLFSDSGFGNLSYSSKISRMMRRQESS-SCTPASTNSYYKFGTHNPSVVDS 2
S SPLF+ SG + S SK+ +M RR+ SS SCTP ST+SYY+ NPS V S
Sbjct: 205 STSPLFAASGCLSSSNPSKLLKMARREGSSFSCTPVSTSSYYRHRGRNPSTVGS 258
>ref|XP_006662851.1| PREDICTED: protein STICHEL-like [Oryza brachyantha]
Length = 1184
Score = 79.3 bits (194), Expect = 5e-13
Identities = 48/113 (42%), Positives = 68/113 (60%)
Frame = -1
Query: 340 SKARKGVDNHAAISKLLDIRSTSLAFVNSAEQSDDTENCNSEDLPQLKHALSRWTVHCSR 161
S ++KG ++ +SKLL++ VNS EQS+DT+N NSE+ L+ + SR
Sbjct: 162 SFSKKGAIRNSTVSKLLELH------VNSGEQSEDTDNYNSENPELLQKG-----GYLSR 210
Query: 160 SASPLFSDSGFGNLSYSSKISRMMRRQESSSCTPASTNSYYKFGTHNPSVVDS 2
S SPLF+ SG + S SK+ ++ R S SCTP ST+SYY++ NPS V S
Sbjct: 211 STSPLFAASGCLSSSNPSKLLKIPREGSSFSCTPVSTSSYYRYRGRNPSTVGS 263
>gb|AAX95843.1| hypothetical protein LOC_Os11g13990 [Oryza sativa Japonica Group]
gi|77549593|gb|ABA92390.1| ATPase, AAA family protein
[Oryza sativa Japonica Group]
Length = 1121
Score = 79.3 bits (194), Expect = 5e-13
Identities = 50/114 (43%), Positives = 69/114 (60%), Gaps = 1/114 (0%)
Frame = -1
Query: 340 SKARKGVDNHAAISKLLDIRSTSLAFVNSAEQSDDTENCNSEDLPQLKHALSRWTVHCSR 161
S ++KG ++ +SKLLD+ VNS EQS+DT+N NSE+ H L + + S
Sbjct: 159 SLSKKGAIRNSTVSKLLDLH------VNSGEQSEDTDNYNSEN-----HELLQKGGYFSH 207
Query: 160 SASPLFSDSGFGNLSYSSKISRMMRRQESS-SCTPASTNSYYKFGTHNPSVVDS 2
S SPLF+ G + S SK ++ RR+ SS SCTP ST+SYY++ NPS V S
Sbjct: 208 STSPLFAAPGCLSSSNPSKFLKVPRREGSSFSCTPVSTSSYYRYRGRNPSTVGS 261
>ref|XP_003577650.1| PREDICTED: uncharacterized protein LOC100846453 [Brachypodium
distachyon]
Length = 1180
Score = 76.6 bits (187), Expect = 3e-12
Identities = 52/114 (45%), Positives = 69/114 (60%), Gaps = 1/114 (0%)
Frame = -1
Query: 340 SKARKGVDNHAAISKLLDIRSTSLAFVNSAEQSDDTENCNSEDLPQLKHALSRWTVHCSR 161
S ++KG ++ +SKLLD+ VNS EQS+DTE SED L+ + SR
Sbjct: 162 SFSKKGAMRNSTVSKLLDLH------VNSGEQSEDTETY-SEDNELLQKG-----GYFSR 209
Query: 160 SASPLFSDSGFGNLSYSSKISRMMRRQESS-SCTPASTNSYYKFGTHNPSVVDS 2
S SPLF+ SG + S SK+ +M RR+ SS SCTP ST+SYY++ NPS V S
Sbjct: 210 STSPLFAASGCLSSSNPSKLLKMARREGSSFSCTPVSTSSYYRYRGRNPSTVGS 263
>gb|AFW56629.1| hypothetical protein ZEAMMB73_394019 [Zea mays]
Length = 1174
Score = 75.1 bits (183), Expect = 9e-12
Identities = 49/112 (43%), Positives = 65/112 (58%), Gaps = 1/112 (0%)
Frame = -1
Query: 334 ARKGVDNHAAISKLLDIRSTSLAFVNSAEQSDDTENCNSEDLPQLKHALSRWTVHCSRSA 155
++KG + AI KL D++ VNS E S+DTENCNSE L L+ + S A
Sbjct: 163 SKKGAVRNQAIPKLSDLQ------VNSGEPSEDTENCNSEALEILRRG------YLSHPA 210
Query: 154 SPLFSDSGFGNLSYSSKISRMMRRQESS-SCTPASTNSYYKFGTHNPSVVDS 2
SPLF+ G + S SK+ ++ RR+ SS SCTP ST+SYY+ N S V S
Sbjct: 211 SPLFAACGCVSSSNPSKLLKIGRREGSSFSCTPVSTSSYYRHVRRNTSTVGS 262
>ref|XP_006663905.1| PREDICTED: protein STICHEL-like [Oryza brachyantha]
Length = 1152
Score = 73.9 bits (180), Expect = 2e-11
Identities = 47/112 (41%), Positives = 65/112 (58%), Gaps = 1/112 (0%)
Frame = -1
Query: 334 ARKGVDNHAAISKLLDIRSTSLAFVNSAEQSDDTENCNSEDLPQLKHALSRWTVHCSRSA 155
++KG A+ KLLD+ VNS EQ++DTENCNSE L + + S +A
Sbjct: 155 SKKGTIRDPAVLKLLDLH------VNSGEQTEDTENCNSES-----QELFQEGGYLSGTA 203
Query: 154 SPLFSDSGFGNLSYSSKISRMMRRQESS-SCTPASTNSYYKFGTHNPSVVDS 2
SP F+ G + S +S++ ++ RR+ SS SCTP ST SYYK G N S + S
Sbjct: 204 SPPFAACGCVSASNTSRLLKVSRREGSSFSCTPISTRSYYKHGRANSSTIGS 255
>ref|XP_002443025.1| hypothetical protein SORBIDRAFT_08g006520 [Sorghum bicolor]
gi|241943718|gb|EES16863.1| hypothetical protein
SORBIDRAFT_08g006520 [Sorghum bicolor]
Length = 1074
Score = 72.4 bits (176), Expect = 6e-11
Identities = 49/116 (42%), Positives = 68/116 (58%), Gaps = 3/116 (2%)
Frame = -1
Query: 340 SKARKGVDNH--AAISKLLDIRSTSLAFVNSAEQSDDTENCNSEDLPQLKHALSRWTVHC 167
++ RKGV + AA+SKL D+++ NS EQS+DTENCNSE L + +
Sbjct: 152 ARRRKGVLSRKGAAVSKLSDLQA------NSGEQSEDTENCNSETLEIFQRG------YF 199
Query: 166 SRSASPLFSDSGFGNLSYSSKISRMMRRQESS-SCTPASTNSYYKFGTHNPSVVDS 2
R SPLF+ G + S SK+ ++ RR+ SS SCTP ST++YY+ N S V S
Sbjct: 200 YRPTSPLFAACGCVSSSNPSKLLKIGRREGSSFSCTPVSTSTYYRHVRRNTSTVGS 255
>ref|NP_001066394.1| Os12g0209300 [Oryza sativa Japonica Group]
gi|77553354|gb|ABA96150.1| ATPase, AAA family protein,
expressed [Oryza sativa Japonica Group]
gi|113648901|dbj|BAF29413.1| Os12g0209300 [Oryza sativa
Japonica Group] gi|125578827|gb|EAZ19973.1| hypothetical
protein OsJ_35564 [Oryza sativa Japonica Group]
Length = 1174
Score = 66.6 bits (161), Expect = 3e-09
Identities = 44/112 (39%), Positives = 60/112 (53%), Gaps = 1/112 (0%)
Frame = -1
Query: 334 ARKGVDNHAAISKLLDIRSTSLAFVNSAEQSDDTENCNSEDLPQLKHALSRWTVHCSRSA 155
++KG A+SKLLD+ VNS EQ++DTEN + SR
Sbjct: 156 SKKGTARDPAVSKLLDLH------VNSTEQTEDTENSE--------------VGYFSRPT 195
Query: 154 SPLFSDSGFGNLSYSSKISRMMRRQESS-SCTPASTNSYYKFGTHNPSVVDS 2
SPLF+ G + S +S++ ++ RR+ SS SCTP ST SYYK G N S + S
Sbjct: 196 SPLFAACGCVSASNTSRLLKVGRREGSSFSCTPISTRSYYKHGRANSSTIGS 247
>gb|EAY82580.1| hypothetical protein OsI_37801 [Oryza sativa Indica Group]
Length = 1174
Score = 66.6 bits (161), Expect = 3e-09
Identities = 44/112 (39%), Positives = 60/112 (53%), Gaps = 1/112 (0%)
Frame = -1
Query: 334 ARKGVDNHAAISKLLDIRSTSLAFVNSAEQSDDTENCNSEDLPQLKHALSRWTVHCSRSA 155
++KG A+SKLLD+ VNS EQ++DTEN + SR
Sbjct: 156 SKKGTARDPAVSKLLDLH------VNSTEQTEDTENSQ--------------VGYFSRPT 195
Query: 154 SPLFSDSGFGNLSYSSKISRMMRRQESS-SCTPASTNSYYKFGTHNPSVVDS 2
SPLF+ G + S +S++ ++ RR+ SS SCTP ST SYYK G N S + S
Sbjct: 196 SPLFAACGCVSASNTSRLLKVGRREGSSFSCTPISTRSYYKHGRANSSTIGS 247
>ref|XP_003576959.1| PREDICTED: uncharacterized protein LOC100826587 [Brachypodium
distachyon]
Length = 1204
Score = 65.5 bits (158), Expect = 7e-09
Identities = 47/114 (41%), Positives = 62/114 (54%), Gaps = 3/114 (2%)
Frame = -1
Query: 334 ARKGVDNHAAISKLLDIRSTSLAFVNSAEQSDDTENCNS--EDLPQLKHALSRWTVHCSR 161
++KG + S+LLDI + S Q++DTENCNS ++L Q S T
Sbjct: 159 SQKGTIRNPTTSELLDIH------IKSGNQTEDTENCNSKSQELFQEGGLFSHLT----- 207
Query: 160 SASPLFSDSGFGNLSYSSKISRMMRRQESS-SCTPASTNSYYKFGTHNPSVVDS 2
SPLF+ G + S SK+ +M RR SS SCTP ST+SYY+ G N S V S
Sbjct: 208 --SPLFAGCGCVSSSNPSKLLKMDRRDGSSFSCTPVSTSSYYRHGRGNNSTVGS 259