BLASTX nr result

ID: Zingiber24_contig00048259 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00048259
         (342 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006388556.1| hypothetical protein POPTR_0157s00210g [Popu...    55   1e-05

>ref|XP_006388556.1| hypothetical protein POPTR_0157s00210g [Populus trichocarpa]
           gi|550310389|gb|ERP47470.1| hypothetical protein
           POPTR_0157s00210g [Populus trichocarpa]
          Length = 843

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 30/72 (41%), Positives = 42/72 (58%)
 Frame = -3

Query: 340 TTCPNQGSVLSPDTRSLNAKSFWGLFLITGAVSLLCCLFYSLRSVYRDRLSLTGVVSGRS 161
           +TCP  GS +S  + SL+ KSFWGLFLI G  +LL  + + +  VYR+R  L    S  S
Sbjct: 707 STCPESGSSIS--SNSLSLKSFWGLFLIAGLAALLALIIFIVMFVYRERNVLRSSDSTAS 764

Query: 160 FGRRLLSIARLF 125
              R+ +  R+F
Sbjct: 765 IWSRIRNFFRIF 776


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