BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00048244
         (271 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q41387.1|PSBW_SPIOL RecName: Full=Photosystem II reaction cen...    69   8e-10
ref|XP_002307627.1| hypothetical protein POPTR_0005s24030g [Popu...    61   1e-07
gb|EOX94570.1| Photosystem II reaction center W [Theobroma cacao]      59   7e-07
ref|XP_002300801.2| hypothetical protein POPTR_0002s04520g [Popu...    58   1e-06
ref|XP_004495141.1| PREDICTED: photosystem II reaction center W ...    57   3e-06
ref|XP_006443912.1| hypothetical protein CICLE_v10024455mg [Citr...    56   4e-06
gb|EMJ01588.1| hypothetical protein PRUPE_ppa012535mg [Prunus pe...    56   4e-06
ref|NP_001236684.1| uncharacterized protein LOC100305788 [Glycin...    55   7e-06
gb|ESW34490.1| hypothetical protein PHAVU_001G157100g [Phaseolus...    55   1e-05

>sp|Q41387.1|PSBW_SPIOL RecName: Full=Photosystem II reaction center W protein,
           chloroplastic; AltName: Full=PSII 6.1 kDa protein;
           Flags: Precursor gi|728716|emb|CAA59409.1| protein of
           photosystem II [Spinacia oleracea]
          Length = 137

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 39/86 (45%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
 Frame = +2

Query: 26  MATISASTSAALVARTSLVRKNACGVASSPVLGLPAMSGRGRLTCSAEKRSSNCESIV-- 199
           MATI+AS+SA+LVAR SLV  +  GV+SSP+LGLP+M+ R ++TCS E + S  E+    
Sbjct: 1   MATITASSSASLVARASLVHNSRVGVSSSPILGLPSMTKRSKVTCSIENKPSTTETTTTT 60

Query: 200 --GXXXXXXXXXXXXXXXNPALALVD 271
                             NPA+ALVD
Sbjct: 61  NKSMGASLLAAAAAATISNPAMALVD 86


>ref|XP_002307627.1| hypothetical protein POPTR_0005s24030g [Populus trichocarpa]
           gi|118486017|gb|ABK94852.1| unknown [Populus
           trichocarpa] gi|222857076|gb|EEE94623.1| hypothetical
           protein POPTR_0005s24030g [Populus trichocarpa]
          Length = 134

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 37/83 (44%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
 Frame = +2

Query: 26  MATISASTSA-ALVARTSLVRKNACGVASSPVLGLPAMSGRGRLTCSAEKRSSNCESIVG 202
           MATI+AST+  + + R +LV K + GV+ SPVLGLPAM+ +GR++CS E + S  E   G
Sbjct: 1   MATITASTTTTSSLVRAALVHKPSLGVSCSPVLGLPAMAKKGRVSCSMEGKPSVEEKCKG 60

Query: 203 XXXXXXXXXXXXXXXNPALALVD 271
                          +PALALVD
Sbjct: 61  MSASLMAAVCAASMSSPALALVD 83


>gb|EOX94570.1| Photosystem II reaction center W [Theobroma cacao]
          Length = 135

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 37/84 (44%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
 Frame = +2

Query: 26  MATISASTSAALVARTSLVRKNACGVASSPVLGLPAMSGRGRLTCSAEKRSSNCE--SIV 199
           MATISAST  + + R +L  K +  VASS  +GLPAM+ +G++ CS EK+SS  E  S V
Sbjct: 1   MATISASTPTSSIIRAALAHKPSPRVASSVAIGLPAMAKKGKVMCSMEKKSSAEEKGSNV 60

Query: 200 GXXXXXXXXXXXXXXXNPALALVD 271
           G               +PA+ALVD
Sbjct: 61  GMSASLLAAACAATMSSPAMALVD 84


>ref|XP_002300801.2| hypothetical protein POPTR_0002s04520g [Populus trichocarpa]
           gi|118489315|gb|ABK96462.1| unknown [Populus trichocarpa
           x Populus deltoides] gi|550344272|gb|EEE80074.2|
           hypothetical protein POPTR_0002s04520g [Populus
           trichocarpa]
          Length = 133

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 32/82 (39%), Positives = 49/82 (59%)
 Frame = +2

Query: 26  MATISASTSAALVARTSLVRKNACGVASSPVLGLPAMSGRGRLTCSAEKRSSNCESIVGX 205
           MATI+AST+ + + R +L  + + GV+SS VLGLPA++ +G+++CS E + +  E   G 
Sbjct: 1   MATITASTATSSIVRAALAHRPSVGVSSSHVLGLPAIAKKGKVSCSMEGKPTVEEKSKGM 60

Query: 206 XXXXXXXXXXXXXXNPALALVD 271
                         +PALALVD
Sbjct: 61  SASLMAAVCAATISSPALALVD 82


>ref|XP_004495141.1| PREDICTED: photosystem II reaction center W protein,
           chloroplastic-like [Cicer arietinum]
          Length = 138

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 28/55 (50%), Positives = 39/55 (70%)
 Frame = +2

Query: 26  MATISASTSAALVARTSLVRKNACGVASSPVLGLPAMSGRGRLTCSAEKRSSNCE 190
           MATISA+T+ A +AR  + +K    V+SSPVLGLP M+  GR+ CS E ++S+ E
Sbjct: 1   MATISATTTTASIARACIAQKRPLAVSSSPVLGLPRMTKVGRVRCSMEGKTSSVE 55


>ref|XP_006443912.1| hypothetical protein CICLE_v10024455mg [Citrus clementina]
           gi|568851829|ref|XP_006479589.1| PREDICTED: photosystem
           II reaction center W protein, chloroplastic-like [Citrus
           sinensis] gi|557546174|gb|ESR57152.1| hypothetical
           protein CICLE_v10024455mg [Citrus clementina]
          Length = 135

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
 Frame = +2

Query: 26  MATISASTSAALVARTSLVRKNACGVASSPVLGLPAMSGRGRLTCSAEKRSSNCES--IV 199
           MA I+AS   + + R+ LV K +   +SSPVLGLPAM+ +G++ CS E++ S  ES   V
Sbjct: 1   MAAITASVGTSSITRSVLVHKPSIVASSSPVLGLPAMAVKGKVRCSMEEKPSKQESKTNV 60

Query: 200 GXXXXXXXXXXXXXXXNPALALVD 271
           G               +PA+ALVD
Sbjct: 61  GMSASLLAAACAATMSSPAMALVD 84


>gb|EMJ01588.1| hypothetical protein PRUPE_ppa012535mg [Prunus persica]
          Length = 165

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 30/82 (36%), Positives = 46/82 (56%)
 Frame = +2

Query: 26  MATISASTSAALVARTSLVRKNACGVASSPVLGLPAMSGRGRLTCSAEKRSSNCESIVGX 205
           MATI+AST  + + R SLV K + G  S+ VL LP+++ +G++ CS E +  +  S +G 
Sbjct: 33  MATITASTPTSSITRASLVHKPSVGAPSATVLALPSLARKGKVGCSMEGKKESSNSKMGK 92

Query: 206 XXXXXXXXXXXXXXNPALALVD 271
                         +PA+ALVD
Sbjct: 93  GASLAAAAMAATMSSPAMALVD 114


>ref|NP_001236684.1| uncharacterized protein LOC100305788 [Glycine max]
           gi|255626603|gb|ACU13646.1| unknown [Glycine max]
          Length = 136

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
 Frame = +2

Query: 26  MATISASTSAALVARTSLVRKNACGVASSPVLGLPAMSGRGRLTCSAEKRSSNCE----S 193
           MATISA+ +   + R  LV+K + G  SSPVLGLPAM   GR++CS E++ S+ +    S
Sbjct: 1   MATISAAITTPSITRACLVQKRSLGF-SSPVLGLPAMGKVGRVSCSMEEKPSSVKESSSS 59

Query: 194 IVGXXXXXXXXXXXXXXXNPALALVD 271
           ++G                PA+ALVD
Sbjct: 60  MLGMGASLMAAASAAAMSGPAMALVD 85


>gb|ESW34490.1| hypothetical protein PHAVU_001G157100g [Phaseolus vulgaris]
          Length = 135

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 35/84 (41%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
 Frame = +2

Query: 26  MATISASTSAALVARTSLVRKNACGVASSPVLGLPAMSGRGRLTCSAEKRSSNCE--SIV 199
           MATI A +    ++R+ LV K   GV+SS VLGLPAMS  G++ CS +++ S  E  S V
Sbjct: 1   MATIIAGSPTTSISRSGLVLKRPFGVSSSTVLGLPAMSRAGKVRCSMDEKPSVQENSSNV 60

Query: 200 GXXXXXXXXXXXXXXXNPALALVD 271
           G               +PA+ALVD
Sbjct: 61  GMGASLLAAACAATMSSPAMALVD 84