BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00048217
         (291 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC74766.1| hypothetical protein OsI_10533 [Oryza sativa Indi...    66   5e-09
gb|EAZ26067.1| hypothetical protein OsJ_09920 [Oryza sativa Japo...    66   5e-09
ref|NP_001049383.1| Os03g0216400 [Oryza sativa Japonica Group] g...    66   5e-09
ref|XP_006645604.1| PREDICTED: putative pentatricopeptide repeat...    64   2e-08
gb|EMT12439.1| hypothetical protein F775_02626 [Aegilops tauschii]     63   5e-08
ref|XP_004137012.1| PREDICTED: pentatricopeptide repeat-containi...    62   6e-08
ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containi...    62   6e-08
emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]    62   6e-08
gb|EOY10376.1| Tetratricopeptide repeat (TPR)-like superfamily p...    62   8e-08
dbj|BAJ92961.1| predicted protein [Hordeum vulgare subsp. vulgare]     62   8e-08
ref|XP_006648732.1| PREDICTED: pentatricopeptide repeat-containi...    62   1e-07
dbj|BAK05712.1| predicted protein [Hordeum vulgare subsp. vulgare]     61   1e-07
gb|EXB75081.1| hypothetical protein L484_002711 [Morus notabilis]      61   2e-07
gb|EMJ17335.1| hypothetical protein PRUPE_ppa019108mg, partial [...    61   2e-07
ref|XP_006404030.1| hypothetical protein EUTSA_v10010154mg [Eutr...    60   2e-07
gb|EPS63455.1| hypothetical protein M569_11327 [Genlisea aurea]        60   2e-07
ref|XP_006297059.1| hypothetical protein CARUB_v10013060mg [Caps...    60   2e-07
ref|XP_004296377.1| PREDICTED: putative pentatricopeptide repeat...    60   2e-07
ref|XP_004969120.1| PREDICTED: pentatricopeptide repeat-containi...    60   3e-07
ref|NP_172104.1| mitochondrial editing factor 3 [Arabidopsis tha...    60   3e-07

>gb|EEC74766.1| hypothetical protein OsI_10533 [Oryza sativa Indica Group]
          Length = 392

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 29/76 (38%), Positives = 47/76 (61%)
 Frame = -3

Query: 229 DDAAQDVPFSTLFNCCASLGAVRPGRELHGYMIRRTGGNARTCCSESSLVSFYAKCGFMT 50
           D A   +  +++   CA LG +  GR +HG  +RR GG+      +++++  YAKCG + 
Sbjct: 35  DAAPNALTLASVLPACARLGDLALGRAIHGLWLRRGGGHGANPIVDNAVLDVYAKCGALA 94

Query: 49  QARKVFDQMPERDIVA 2
            AR++FD+MPERD+ A
Sbjct: 95  SARRLFDEMPERDVFA 110


>gb|EAZ26067.1| hypothetical protein OsJ_09920 [Oryza sativa Japonica Group]
          Length = 359

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 29/76 (38%), Positives = 47/76 (61%)
 Frame = -3

Query: 229 DDAAQDVPFSTLFNCCASLGAVRPGRELHGYMIRRTGGNARTCCSESSLVSFYAKCGFMT 50
           D A   +  +++   CA LG +  GR +HG  +RR GG+      +++++  YAKCG + 
Sbjct: 2   DAAPNALTLASVLPACARLGDLALGRAIHGLWLRRGGGHGANPIVDNAVLDVYAKCGALA 61

Query: 49  QARKVFDQMPERDIVA 2
            AR++FD+MPERD+ A
Sbjct: 62  SARRLFDEMPERDVFA 77


>ref|NP_001049383.1| Os03g0216400 [Oryza sativa Japonica Group]
           gi|108706851|gb|ABF94646.1| pentatricopeptide, putative,
           expressed [Oryza sativa Japonica Group]
           gi|113547854|dbj|BAF11297.1| Os03g0216400 [Oryza sativa
           Japonica Group] gi|215741245|dbj|BAG97740.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 392

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 29/76 (38%), Positives = 47/76 (61%)
 Frame = -3

Query: 229 DDAAQDVPFSTLFNCCASLGAVRPGRELHGYMIRRTGGNARTCCSESSLVSFYAKCGFMT 50
           D A   +  +++   CA LG +  GR +HG  +RR GG+      +++++  YAKCG + 
Sbjct: 35  DAAPNALTLASVLPACARLGDLALGRAIHGLWLRRGGGHGANPIVDNAVLDVYAKCGALA 94

Query: 49  QARKVFDQMPERDIVA 2
            AR++FD+MPERD+ A
Sbjct: 95  SARRLFDEMPERDVFA 110


>ref|XP_006645604.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g17630-like, partial [Oryza brachyantha]
          Length = 800

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 37/84 (44%), Positives = 49/84 (58%)
 Frame = -3

Query: 253 RRPRDWLPDDAAQDVPFSTLFNCCASLGAVRPGRELHGYMIRRTGGNARTCCSESSLVSF 74
           R  R WLP +    V  +T+ + CA L A+R GRELH Y +R      R    E+ LV+ 
Sbjct: 507 RMQRRWLPPNV---VTMATVLSACAELLALRLGRELHAYAMRAKLD--RHSLVENGLVNM 561

Query: 73  YAKCGFMTQARKVFDQMPERDIVA 2
           YAKCG +  ARKVFD M  RD+++
Sbjct: 562 YAKCGKVAGARKVFDGMKTRDLIS 585


>gb|EMT12439.1| hypothetical protein F775_02626 [Aegilops tauschii]
          Length = 362

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 29/76 (38%), Positives = 46/76 (60%)
 Frame = -3

Query: 229 DDAAQDVPFSTLFNCCASLGAVRPGRELHGYMIRRTGGNARTCCSESSLVSFYAKCGFMT 50
           D A   +  +++   CA L ++  GR +HG+ +RR GG       +++++  YAKCG + 
Sbjct: 2   DAAPNALTLASVLPACARLRSLVLGRAIHGFWLRRGGGPGANPIVDNAVLDVYAKCGALR 61

Query: 49  QARKVFDQMPERDIVA 2
            AR+VFD MPERD+ A
Sbjct: 62  SARRVFDGMPERDVFA 77


>ref|XP_004137012.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g03540-like [Cucumis sativus]
           gi|449493172|ref|XP_004159212.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g03540-like [Cucumis sativus]
          Length = 605

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 31/67 (46%), Positives = 42/67 (62%)
 Frame = -3

Query: 205 FSTLFNCCASLGAVRPGRELHGYMIRRTGGNARTCCSESSLVSFYAKCGFMTQARKVFDQ 26
           F T+   CA L AV PG+E+H   IR+  G  R    ES+LV  YAKCG +  A +VFD+
Sbjct: 364 FGTVIRACAGLAAVTPGKEIHCQYIRK--GGWRDVIVESALVDLYAKCGCINFAYRVFDR 421

Query: 25  MPERDIV 5
           MP R+++
Sbjct: 422 MPTRNLI 428


>ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g03540-like [Vitis vinifera]
          Length = 633

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 31/67 (46%), Positives = 42/67 (62%)
 Frame = -3

Query: 205 FSTLFNCCASLGAVRPGRELHGYMIRRTGGNARTCCSESSLVSFYAKCGFMTQARKVFDQ 26
           F T+   CA L AVR G+E+H   IR+  G  R    ES+LV  YAKCG +  A+ +FDQ
Sbjct: 363 FGTILRTCAGLAAVRQGKEVHCQYIRK--GGWRDVIVESALVDLYAKCGCIEYAQTIFDQ 420

Query: 25  MPERDIV 5
           MP R+++
Sbjct: 421 MPVRNLI 427


>emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]
          Length = 708

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 31/67 (46%), Positives = 42/67 (62%)
 Frame = -3

Query: 205 FSTLFNCCASLGAVRPGRELHGYMIRRTGGNARTCCSESSLVSFYAKCGFMTQARKVFDQ 26
           F T+   CA L AVR G+E+H   IR+  G  R    ES+LV  YAKCG +  A+ +FDQ
Sbjct: 422 FGTILRTCAGLAAVRQGKEVHCQYIRK--GGWRDVIVESALVDLYAKCGCIEYAQTIFDQ 479

Query: 25  MPERDIV 5
           MP R+++
Sbjct: 480 MPVRNLI 486


>gb|EOY10376.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
           cacao]
          Length = 720

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 34/72 (47%), Positives = 44/72 (61%)
 Frame = -3

Query: 217 QDVPFSTLFNCCASLGAVRPGRELHGYMIRRTGGNARTCCSESSLVSFYAKCGFMTQARK 38
           +DV FS++   CA L  +  G+ELHGY+IR  GG        SSLV  YAKCG +  AR 
Sbjct: 347 RDVSFSSIMPACAYLTTLHLGKELHGYIIR--GGFDDNVFVASSLVDMYAKCGNIKAARW 404

Query: 37  VFDQMPERDIVA 2
           +FDQM   D+V+
Sbjct: 405 IFDQMEYHDMVS 416


>dbj|BAJ92961.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 384

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 28/76 (36%), Positives = 46/76 (60%)
 Frame = -3

Query: 229 DDAAQDVPFSTLFNCCASLGAVRPGRELHGYMIRRTGGNARTCCSESSLVSFYAKCGFMT 50
           D A   +  +++   CA L ++  GR +HG+ +RR GG       +++++  YAKCG + 
Sbjct: 26  DAAPNALTLASVLPACARLRSLGLGRAIHGFWLRRGGGPGANPIVDNAVLDVYAKCGALR 85

Query: 49  QARKVFDQMPERDIVA 2
            AR++FD MPERD+ A
Sbjct: 86  SARRLFDGMPERDVFA 101


>ref|XP_006648732.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Oryza brachyantha]
          Length = 575

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 30/72 (41%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
 Frame = -3

Query: 208 PFSTL--FNCCASLGAVRPGRELHGYMIRRT-GGNARTCCSESSLVSFYAKCGFMTQARK 38
           PF+ +   + CA LG V  G+E+HG+++RR  G N       ++L+  Y+KCG M  A  
Sbjct: 277 PFALVSCLSVCAKLGLVARGKEMHGFILRRCIGSNPFNIFIHNALIDMYSKCGNMVAAMA 336

Query: 37  VFDQMPERDIVA 2
            FD+MPERDI++
Sbjct: 337 TFDRMPERDIIS 348


>dbj|BAK05712.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 538

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 33/76 (43%), Positives = 45/76 (59%)
 Frame = -3

Query: 235 LPDDAAQDVPFSTLFNCCASLGAVRPGRELHGYMIRRTGGNARTCCSESSLVSFYAKCGF 56
           LPDDA     F  +   CA LGA+  GR +H Y++R TG +A      ++L+  YAKCG 
Sbjct: 268 LPDDAT----FVAVLGACARLGALDAGRWVHAYIVR-TGRDAAAGVVGNALIDMYAKCGA 322

Query: 55  MTQARKVFDQMPERDI 8
           + QA +VFD M  RD+
Sbjct: 323 VEQAAEVFDAMTRRDV 338


>gb|EXB75081.1| hypothetical protein L484_002711 [Morus notabilis]
          Length = 989

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 28/74 (37%), Positives = 46/74 (62%)
 Frame = -3

Query: 223 AAQDVPFSTLFNCCASLGAVRPGRELHGYMIRRTGGNARTCCSESSLVSFYAKCGFMTQA 44
           ++ D  F ++   CA+LGA R GRE+H  ++R   G  +    +++L+  YAKCG +  A
Sbjct: 131 SSNDFTFPSVIKACAALGATRTGREIHCVVLRT--GFEKNVVVQTALIDLYAKCGCLRNA 188

Query: 43  RKVFDQMPERDIVA 2
           R V D++PE D+V+
Sbjct: 189 RNVLDKIPEPDLVS 202


>gb|EMJ17335.1| hypothetical protein PRUPE_ppa019108mg, partial [Prunus persica]
          Length = 608

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 31/67 (46%), Positives = 42/67 (62%)
 Frame = -3

Query: 205 FSTLFNCCASLGAVRPGRELHGYMIRRTGGNARTCCSESSLVSFYAKCGFMTQARKVFDQ 26
           F T+   CA L AV+ G+E+H   +RR G   R    ES+LV  YAKCG +  AR+VF Q
Sbjct: 362 FGTVLRACAGLAAVQQGKEVHCQYVRRCGW--RDVIVESALVHLYAKCGCIDFARRVFTQ 419

Query: 25  MPERDIV 5
           MP R+++
Sbjct: 420 MPVRNLI 426



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 29/68 (42%), Positives = 42/68 (61%)
 Frame = -3

Query: 205 FSTLFNCCASLGAVRPGRELHGYMIRRTGGNARTCCSESSLVSFYAKCGFMTQARKVFDQ 26
           F T+   C +LG +R GRE+H  +I  T G       ESSLV  Y KCG +  AR+VFD+
Sbjct: 265 FGTVLAACGNLGRLRQGREMHAKVI--TYGLCGNVVVESSLVDMYGKCGSVECARRVFDR 322

Query: 25  MPERDIVA 2
           +P+++ V+
Sbjct: 323 IPKKNSVS 330


>ref|XP_006404030.1| hypothetical protein EUTSA_v10010154mg [Eutrema salsugineum]
           gi|557105149|gb|ESQ45483.1| hypothetical protein
           EUTSA_v10010154mg [Eutrema salsugineum]
          Length = 724

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 26/61 (42%), Positives = 44/61 (72%)
 Frame = -3

Query: 184 CASLGAVRPGRELHGYMIRRTGGNARTCCSESSLVSFYAKCGFMTQARKVFDQMPERDIV 5
           C S+ A++  R+LH  ++   GG A +  + ++L+S YA+CGF+ QAR VFD+MP+R++V
Sbjct: 30  CVSITALKRARQLHA-LVLTGGGTAESPYANNNLISMYARCGFLEQARNVFDKMPQRNVV 88

Query: 4   A 2
           +
Sbjct: 89  S 89


>gb|EPS63455.1| hypothetical protein M569_11327 [Genlisea aurea]
          Length = 685

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 29/64 (45%), Positives = 41/64 (64%)
 Frame = -3

Query: 196 LFNCCASLGAVRPGRELHGYMIRRTGGNARTCCSESSLVSFYAKCGFMTQARKVFDQMPE 17
           + +CC+ LG +  G+ +H ++I R    AR     ++LV  YAKCG M  AR VFD+MPE
Sbjct: 217 ILSCCSHLGDLSAGQWIHNFIIERK--TARNVFVNTALVDMYAKCGGMESARLVFDEMPE 274

Query: 16  RDIV 5
           +DIV
Sbjct: 275 KDIV 278


>ref|XP_006297059.1| hypothetical protein CARUB_v10013060mg [Capsella rubella]
           gi|482565768|gb|EOA29957.1| hypothetical protein
           CARUB_v10013060mg [Capsella rubella]
          Length = 730

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 31/70 (44%), Positives = 43/70 (61%)
 Frame = -3

Query: 211 VPFSTLFNCCASLGAVRPGRELHGYMIRRTGGNARTCCSESSLVSFYAKCGFMTQARKVF 32
           V FS++   CA L  +R G++LHGY++R  GG        SSLV  Y+KCG +  ARK+F
Sbjct: 359 VAFSSVIPACAHLATLRLGKQLHGYVLR--GGFGSNIFISSSLVDMYSKCGNINAARKIF 416

Query: 31  DQMPERDIVA 2
           D+M   D V+
Sbjct: 417 DRMNVHDEVS 426


>ref|XP_004296377.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Fragaria vesca subsp. vesca]
          Length = 693

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 32/71 (45%), Positives = 43/71 (60%)
 Frame = -3

Query: 214 DVPFSTLFNCCASLGAVRPGRELHGYMIRRTGGNARTCCSESSLVSFYAKCGFMTQARKV 35
           DV FS++   CA L  +  G++LHGY+IR  GG        SSLV  YAKCG +  AR +
Sbjct: 321 DVSFSSIIPACAHLTTLHLGQQLHGYIIR--GGFEDNIYVASSLVDMYAKCGNIKMARWI 378

Query: 34  FDQMPERDIVA 2
           FD+M   D+V+
Sbjct: 379 FDKMEHHDMVS 389


>ref|XP_004969120.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
           chloroplastic-like isoform X1 [Setaria italica]
          Length = 620

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 32/66 (48%), Positives = 38/66 (57%)
 Frame = -3

Query: 199 TLFNCCASLGAVRPGRELHGYMIRRTGGNARTCCSESSLVSFYAKCGFMTQARKVFDQMP 20
           T+   CA LG  R GR +HGY  +   G A      SSLV FY KCG +  AR VFD MP
Sbjct: 186 TVLKACAGLGLFRAGRAVHGYAWK--AGIAECVYVMSSLVDFYGKCGQVEDARGVFDAMP 243

Query: 19  ERDIVA 2
           ER +V+
Sbjct: 244 ERTVVS 249



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 22/65 (33%), Positives = 40/65 (61%)
 Frame = -3

Query: 205 FSTLFNCCASLGAVRPGRELHGYMIRRTGGNARTCCSESSLVSFYAKCGFMTQARKVFDQ 26
           +++L  CC + G++R GR++H  +++R    +R     + L  FYA+CG +  A + F+ 
Sbjct: 79  YASLLQCCVAAGSLRAGRQVHAALVKRGPYYSRNAYVGTKLAVFYARCGALADAERAFEA 138

Query: 25  MPERD 11
           +PERD
Sbjct: 139 LPERD 143


>ref|NP_172104.1| mitochondrial editing factor 3 [Arabidopsis thaliana]
           gi|75174948|sp|Q9LND4.1|PPR14_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g06140, mitochondrial; Flags: Precursor
           gi|8810476|gb|AAF80137.1|AC024174_19 Contains similarity
           to a hypothetical protein F24K9.13 gi|6006885 from
           Arabidopsis thaliana gb|AC008153 and contains multiple
           PPR PF|01535 repeats [Arabidopsis thaliana]
           gi|332189825|gb|AEE27946.1| mitochondrial editing factor
           3 [Arabidopsis thaliana]
          Length = 558

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 27/61 (44%), Positives = 41/61 (67%)
 Frame = -3

Query: 184 CASLGAVRPGRELHGYMIRRTGGNARTCCSESSLVSFYAKCGFMTQARKVFDQMPERDIV 5
           C+SLG++R G+ +HGYMIR   G      + +S +  YA+CG +  AR VFD MPER+++
Sbjct: 322 CSSLGSLRHGKSVHGYMIRN--GIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVI 379

Query: 4   A 2
           +
Sbjct: 380 S 380