BLASTX nr result
ID: Zingiber24_contig00048131
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00048131
(294 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004140701.1| PREDICTED: DNA repair and recombination prot... 60 4e-07
gb|EXC17352.1| DNA repair protein rhp54 [Morus notabilis] 58 1e-06
ref|XP_004296072.1| PREDICTED: DNA repair and recombination prot... 57 3e-06
ref|XP_002282100.2| PREDICTED: DNA repair and recombination prot... 56 6e-06
emb|CBI32424.3| unnamed protein product [Vitis vinifera] 56 6e-06
emb|CAN70202.1| hypothetical protein VITISV_021223 [Vitis vinifera] 56 6e-06
ref|XP_006487098.1| PREDICTED: DNA repair and recombination prot... 55 7e-06
ref|XP_004954012.1| PREDICTED: DNA repair and recombination prot... 55 7e-06
gb|EOX98235.1| DNA repair and recombination protein RAD54-like i... 55 7e-06
ref|XP_002518776.1| DNA repair and recombination protein RAD54B,... 55 7e-06
>ref|XP_004140701.1| PREDICTED: DNA repair and recombination protein RAD54-like [Cucumis
sativus] gi|449497618|ref|XP_004160452.1| PREDICTED: DNA
repair and recombination protein RAD54-like [Cucumis
sativus]
Length = 928
Score = 59.7 bits (143), Expect = 4e-07
Identities = 35/59 (59%), Positives = 39/59 (66%)
Frame = +1
Query: 31 NAILQLSAGDEVAFVFTNQVDGKLVPVESASRSQNQNQTYGNLMVSANFKQQNQNTRQK 207
+ ILQ SAGDEV FVF+NQVDGKLVPVES S S GN N + NQN+RQK
Sbjct: 798 DTILQASAGDEVTFVFSNQVDGKLVPVESMS-SPRMKDAEGN----GNNSRLNQNSRQK 851
>gb|EXC17352.1| DNA repair protein rhp54 [Morus notabilis]
Length = 941
Score = 58.2 bits (139), Expect = 1e-06
Identities = 32/61 (52%), Positives = 43/61 (70%)
Frame = +1
Query: 31 NAILQLSAGDEVAFVFTNQVDGKLVPVESASRSQNQNQTYGNLMVSANFKQQNQNTRQKS 210
+AI Q SAGDEV+FVFTNQVDGKLVP++S +R + Q +T N+ N + QN QK+
Sbjct: 810 DAIFQASAGDEVSFVFTNQVDGKLVPIDSIARPRMQ-ETEENV----NHPKSKQNLNQKT 864
Query: 211 L 213
+
Sbjct: 865 M 865
>ref|XP_004296072.1| PREDICTED: DNA repair and recombination protein RAD54-like
[Fragaria vesca subsp. vesca]
Length = 926
Score = 57.0 bits (136), Expect = 3e-06
Identities = 33/75 (44%), Positives = 46/75 (61%)
Frame = +1
Query: 31 NAILQLSAGDEVAFVFTNQVDGKLVPVESASRSQNQNQTYGNLMVSANFKQQNQNTRQKS 210
+AILQ SAG+EV FVFTNQVDGKLVP+ES S+ Q + + N + +N +KS
Sbjct: 796 DAILQASAGNEVTFVFTNQVDGKLVPIESKVSSKMQGE-----VGKENIFKSKKNPNRKS 850
Query: 211 LATVGTTVSWESKSI 255
+ +SW+ K +
Sbjct: 851 M-----LMSWQRKPL 860
>ref|XP_002282100.2| PREDICTED: DNA repair and recombination protein RAD54-like [Vitis
vinifera]
Length = 934
Score = 55.8 bits (133), Expect = 6e-06
Identities = 36/74 (48%), Positives = 44/74 (59%)
Frame = +1
Query: 31 NAILQLSAGDEVAFVFTNQVDGKLVPVESASRSQNQNQTYGNLMVSANFKQQNQNTRQKS 210
+AI Q SAGDEV FVFTNQVDGKLVPVES R+ Q V AN +NQ+ ++
Sbjct: 803 DAIFQASAGDEVTFVFTNQVDGKLVPVESKVRANMQG-------VEAN---KNQSDKRGK 852
Query: 211 LATVGTTVSWESKS 252
L T +S +S
Sbjct: 853 LLQKPTLLSKHQQS 866
>emb|CBI32424.3| unnamed protein product [Vitis vinifera]
Length = 1112
Score = 55.8 bits (133), Expect = 6e-06
Identities = 36/74 (48%), Positives = 44/74 (59%)
Frame = +1
Query: 31 NAILQLSAGDEVAFVFTNQVDGKLVPVESASRSQNQNQTYGNLMVSANFKQQNQNTRQKS 210
+AI Q SAGDEV FVFTNQVDGKLVPVES R+ Q V AN +NQ+ ++
Sbjct: 981 DAIFQASAGDEVTFVFTNQVDGKLVPVESKVRANMQG-------VEAN---KNQSDKRGK 1030
Query: 211 LATVGTTVSWESKS 252
L T +S +S
Sbjct: 1031 LLQKPTLLSKHQQS 1044
>emb|CAN70202.1| hypothetical protein VITISV_021223 [Vitis vinifera]
Length = 985
Score = 55.8 bits (133), Expect = 6e-06
Identities = 36/74 (48%), Positives = 44/74 (59%)
Frame = +1
Query: 31 NAILQLSAGDEVAFVFTNQVDGKLVPVESASRSQNQNQTYGNLMVSANFKQQNQNTRQKS 210
+AI Q SAGDEV FVFTNQVDGKLVPVES R+ Q V AN +NQ+ ++
Sbjct: 782 DAIFQASAGDEVTFVFTNQVDGKLVPVESKVRANMQG-------VEAN---KNQSDKRGK 831
Query: 211 LATVGTTVSWESKS 252
L T +S +S
Sbjct: 832 LLQKPTLLSKHQQS 845
>ref|XP_006487098.1| PREDICTED: DNA repair and recombination protein RAD54-like [Citrus
sinensis]
Length = 930
Score = 55.5 bits (132), Expect = 7e-06
Identities = 32/60 (53%), Positives = 38/60 (63%)
Frame = +1
Query: 31 NAILQLSAGDEVAFVFTNQVDGKLVPVESASRSQNQNQTYGNLMVSANFKQQNQNTRQKS 210
+AILQ SAGDEV FVFTNQVDGKLVP+ES + Q T GN ++ + QKS
Sbjct: 804 DAILQASAGDEVTFVFTNQVDGKLVPIESKVSPKIQG-TEGNKNLNNHITNPKPKLDQKS 862
>ref|XP_004954012.1| PREDICTED: DNA repair and recombination protein RAD54-like [Setaria
italica]
Length = 972
Score = 55.5 bits (132), Expect = 7e-06
Identities = 27/33 (81%), Positives = 30/33 (90%)
Frame = +1
Query: 31 NAILQLSAGDEVAFVFTNQVDGKLVPVESASRS 129
+ ILQ SAGDEV+FVFTNQVDGKLVPVES +RS
Sbjct: 848 DTILQSSAGDEVSFVFTNQVDGKLVPVESMARS 880
>gb|EOX98235.1| DNA repair and recombination protein RAD54-like isoform 1 [Theobroma
cacao]
Length = 968
Score = 55.5 bits (132), Expect = 7e-06
Identities = 36/71 (50%), Positives = 43/71 (60%), Gaps = 11/71 (15%)
Frame = +1
Query: 31 NAILQLSAGDEVAFVFTNQVDGKLVPVES------ASRSQNQNQTYG--NLMVSANFKQQ 186
+AILQ SAGDEV FVFTNQVDGKLVP+ES + N++Q G N++ K Q
Sbjct: 818 DAILQASAGDEVTFVFTNQVDGKLVPIESKVNPRMQEKEGNKSQNIGKANVLKREGTKIQ 877
Query: 187 ---NQNTRQKS 210
NQN KS
Sbjct: 878 KAANQNLDSKS 888
>ref|XP_002518776.1| DNA repair and recombination protein RAD54B, putative [Ricinus
communis] gi|223542157|gb|EEF43701.1| DNA repair and
recombination protein RAD54B, putative [Ricinus
communis]
Length = 940
Score = 55.5 bits (132), Expect = 7e-06
Identities = 30/47 (63%), Positives = 34/47 (72%), Gaps = 6/47 (12%)
Frame = +1
Query: 31 NAILQLSAGDEVAFVFTNQVDGKLVPVESASRSQ------NQNQTYG 153
+AILQ SAGDEV FVFTNQVDGKLVP+ES + + NQNQ G
Sbjct: 808 DAILQASAGDEVTFVFTNQVDGKLVPIESTASPKMLEIKGNQNQHDG 854