BLASTX nr result

ID: Zingiber24_contig00048122 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00048122
         (337 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004912268.1| PREDICTED: PR domain zinc finger protein 15 ...    56   4e-06
ref|XP_004912266.1| PREDICTED: PR domain zinc finger protein 15 ...    56   4e-06

>ref|XP_004912268.1| PREDICTED: PR domain zinc finger protein 15 isoform X4 [Xenopus
            (Silurana) tropicalis]
          Length = 1272

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 39/99 (39%), Positives = 42/99 (42%), Gaps = 2/99 (2%)
 Frame = +3

Query: 45   CTHPSRISLKSTLSTPQSQILTSSMSQP--H*HSPRLNLRSRHHPCLGLSRRHPPHISLK 218
            CTH    SL  T S   S   T S S      HSP  +L   H P   LSR H P  SL 
Sbjct: 1074 CTHSPSHSLSRTRSPSHSLSRTRSPSHSLSRTHSPSHSLSRTHSPSHSLSRTHSPSHSLS 1133

Query: 219  SRHHLCLGLSRQHPPRFNLKSQHHPSLILNRRHHPRLSL 335
              H     L R H P  +L   H PS  L+R H P  SL
Sbjct: 1134 RTHSPSHSLFRTHSPSHSLSRTHSPSHSLSRTHSPSHSL 1172


>ref|XP_004912266.1| PREDICTED: PR domain zinc finger protein 15 isoform X2 [Xenopus
            (Silurana) tropicalis] gi|512824456|ref|XP_004912267.1|
            PREDICTED: PR domain zinc finger protein 15 isoform X3
            [Xenopus (Silurana) tropicalis]
          Length = 1273

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 39/99 (39%), Positives = 42/99 (42%), Gaps = 2/99 (2%)
 Frame = +3

Query: 45   CTHPSRISLKSTLSTPQSQILTSSMSQP--H*HSPRLNLRSRHHPCLGLSRRHPPHISLK 218
            CTH    SL  T S   S   T S S      HSP  +L   H P   LSR H P  SL 
Sbjct: 1075 CTHSPSHSLSRTRSPSHSLSRTRSPSHSLSRTHSPSHSLSRTHSPSHSLSRTHSPSHSLS 1134

Query: 219  SRHHLCLGLSRQHPPRFNLKSQHHPSLILNRRHHPRLSL 335
              H     L R H P  +L   H PS  L+R H P  SL
Sbjct: 1135 RTHSPSHSLFRTHSPSHSLSRTHSPSHSLSRTHSPSHSL 1173


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