BLASTX nr result
ID: Zingiber24_contig00048047
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00048047
(274 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003568903.1| PREDICTED: putative pentatricopeptide repeat... 133 3e-29
ref|XP_006643763.1| PREDICTED: putative pentatricopeptide repeat... 129 3e-28
dbj|BAK05014.1| predicted protein [Hordeum vulgare subsp. vulgare] 129 4e-28
gb|EMS48923.1| hypothetical protein TRIUR3_08085 [Triticum urartu] 129 5e-28
gb|EAY72563.1| hypothetical protein OsI_00429 [Oryza sativa Indi... 129 5e-28
gb|EMS61855.1| hypothetical protein TRIUR3_23380 [Triticum urartu] 128 7e-28
ref|NP_001172186.1| Os01g0151900 [Oryza sativa Japonica Group] g... 128 9e-28
gb|EAZ10568.1| hypothetical protein OsJ_00400 [Oryza sativa Japo... 128 9e-28
ref|NP_001148062.1| GTP binding protein [Zea mays] gi|195615570|... 127 2e-27
ref|NP_001130971.1| GTP binding protein [Zea mays] gi|194690592|... 127 2e-27
ref|XP_002457357.1| hypothetical protein SORBIDRAFT_03g005950 [S... 126 3e-27
ref|XP_004968227.1| PREDICTED: putative pentatricopeptide repeat... 124 1e-26
gb|EMT24172.1| Putative pentatricopeptide repeat-containing prot... 100 2e-19
emb|CAN62355.1| hypothetical protein VITISV_022418 [Vitis vinifera] 89 6e-16
ref|XP_002282646.1| PREDICTED: putative pentatricopeptide repeat... 87 2e-15
ref|XP_004252116.1| PREDICTED: putative pentatricopeptide repeat... 84 3e-14
ref|XP_006849942.1| hypothetical protein AMTR_s00022p00129420 [A... 82 1e-13
ref|XP_002532249.1| pentatricopeptide repeat-containing protein,... 82 1e-13
gb|EOY13086.1| Tetratricopeptide repeat (TPR)-like superfamily p... 79 5e-13
ref|XP_004488749.1| PREDICTED: LOW QUALITY PROTEIN: putative pen... 79 6e-13
>ref|XP_003568903.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Brachypodium distachyon]
Length = 537
Score = 133 bits (334), Expect = 3e-29
Identities = 59/90 (65%), Positives = 75/90 (83%)
Frame = -3
Query: 272 FFKWASTQTNYLHGPRAYNEILDILGRMKQVKLMQETFDEIPKDRQGSAINNKTFAILMH 93
FF WA+ Y HGPR Y E+LDILGRMK+VKLM + FDEIP++R+G + N+TFA+L++
Sbjct: 132 FFNWAAGLPAYAHGPRTYTEMLDILGRMKKVKLMTQLFDEIPEERRGLVVTNRTFAVLLN 191
Query: 92 RYSGAHKVQEAIGIFYKRIDYGFELDLIGF 3
RY+GAHKVQEAI +FYKR DYGFE+DL+GF
Sbjct: 192 RYAGAHKVQEAIEMFYKRKDYGFEVDLVGF 221
>ref|XP_006643763.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Oryza brachyantha]
Length = 535
Score = 129 bits (325), Expect = 3e-28
Identities = 56/90 (62%), Positives = 76/90 (84%)
Frame = -3
Query: 272 FFKWASTQTNYLHGPRAYNEILDILGRMKQVKLMQETFDEIPKDRQGSAINNKTFAILMH 93
FFKWA++ Y HG R+Y E+LDILGRMK+V+LM++ FDEIP++R+ + N+ FA+L++
Sbjct: 130 FFKWAASLPRYAHGSRSYTEMLDILGRMKKVRLMRQLFDEIPEERRQLVVTNRMFAVLLN 189
Query: 92 RYSGAHKVQEAIGIFYKRIDYGFELDLIGF 3
RY+GAHKVQEA+ +FYKR DYGFELDL+GF
Sbjct: 190 RYAGAHKVQEAVDMFYKRKDYGFELDLVGF 219
>dbj|BAK05014.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 537
Score = 129 bits (324), Expect = 4e-28
Identities = 58/90 (64%), Positives = 74/90 (82%)
Frame = -3
Query: 272 FFKWASTQTNYLHGPRAYNEILDILGRMKQVKLMQETFDEIPKDRQGSAINNKTFAILMH 93
FF WA+ Y HGPR Y E+LDILGRMK+V+LM++ FDEIP+ R+G + N+ FA+L++
Sbjct: 132 FFTWAAGLPTYEHGPRTYIEMLDILGRMKKVRLMRQLFDEIPEQRRGLVVTNRMFAVLLN 191
Query: 92 RYSGAHKVQEAIGIFYKRIDYGFELDLIGF 3
RY+GAHKVQEAI IFYKR DYGFE+DL+GF
Sbjct: 192 RYAGAHKVQEAIEIFYKRNDYGFEVDLVGF 221
>gb|EMS48923.1| hypothetical protein TRIUR3_08085 [Triticum urartu]
Length = 537
Score = 129 bits (323), Expect = 5e-28
Identities = 56/90 (62%), Positives = 75/90 (83%)
Frame = -3
Query: 272 FFKWASTQTNYLHGPRAYNEILDILGRMKQVKLMQETFDEIPKDRQGSAINNKTFAILMH 93
FF WA+ +Y HGPR Y E+LDILGRMK+V+LM++ FDEIP+ R+G + N+ FA+L++
Sbjct: 132 FFNWAAGLPSYEHGPRTYTEMLDILGRMKKVRLMRQLFDEIPEQRRGLVVTNRMFAVLLN 191
Query: 92 RYSGAHKVQEAIGIFYKRIDYGFELDLIGF 3
RY+GAHKVQEAI +FYKR DYGFE++L+GF
Sbjct: 192 RYAGAHKVQEAIEVFYKRKDYGFEVNLVGF 221
>gb|EAY72563.1| hypothetical protein OsI_00429 [Oryza sativa Indica Group]
Length = 535
Score = 129 bits (323), Expect = 5e-28
Identities = 59/90 (65%), Positives = 74/90 (82%)
Frame = -3
Query: 272 FFKWASTQTNYLHGPRAYNEILDILGRMKQVKLMQETFDEIPKDRQGSAINNKTFAILMH 93
FFKWA+ Y HG RAY E+LDILGRMK+V+LM++ FDEIP + + S I N+ FA+L++
Sbjct: 132 FFKWAAGLPQYNHGSRAYTEMLDILGRMKKVRLMRQLFDEIPMESRQSVITNRMFAVLLN 191
Query: 92 RYSGAHKVQEAIGIFYKRIDYGFELDLIGF 3
RY+GAHKVQEAI +FYKR DYGFELDL+GF
Sbjct: 192 RYAGAHKVQEAIDMFYKRKDYGFELDLVGF 221
>gb|EMS61855.1| hypothetical protein TRIUR3_23380 [Triticum urartu]
Length = 538
Score = 128 bits (322), Expect = 7e-28
Identities = 57/90 (63%), Positives = 75/90 (83%)
Frame = -3
Query: 272 FFKWASTQTNYLHGPRAYNEILDILGRMKQVKLMQETFDEIPKDRQGSAINNKTFAILMH 93
FF WA+ ++ HGPR Y E+LDILGRMK+V+LM++ FDEIP+ R+G + N+ FA+L++
Sbjct: 133 FFDWAAGLPSHGHGPRTYTEMLDILGRMKKVRLMRQLFDEIPEQRRGLVVTNRMFAVLLN 192
Query: 92 RYSGAHKVQEAIGIFYKRIDYGFELDLIGF 3
RY+GAHKVQEAI IFYKR DYGFE+DL+GF
Sbjct: 193 RYAGAHKVQEAIEIFYKRKDYGFEVDLVGF 222
>ref|NP_001172186.1| Os01g0151900 [Oryza sativa Japonica Group]
gi|9663979|dbj|BAB03620.1| hypothetical protein [Oryza
sativa Japonica Group] gi|13872936|dbj|BAB44041.1|
hypothetical protein [Oryza sativa Japonica Group]
gi|215768885|dbj|BAH01114.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|255672883|dbj|BAH90916.1| Os01g0151900 [Oryza sativa
Japonica Group]
Length = 534
Score = 128 bits (321), Expect = 9e-28
Identities = 58/90 (64%), Positives = 74/90 (82%)
Frame = -3
Query: 272 FFKWASTQTNYLHGPRAYNEILDILGRMKQVKLMQETFDEIPKDRQGSAINNKTFAILMH 93
FFKWA+ Y HG RAY E+LDILGRMK+V+LM++ FDEIP + + S + N+ FA+L++
Sbjct: 132 FFKWAAGLPQYNHGSRAYTEMLDILGRMKKVRLMRQLFDEIPVESRQSVVTNRMFAVLLN 191
Query: 92 RYSGAHKVQEAIGIFYKRIDYGFELDLIGF 3
RY+GAHKVQEAI +FYKR DYGFELDL+GF
Sbjct: 192 RYAGAHKVQEAIDMFYKRKDYGFELDLVGF 221
>gb|EAZ10568.1| hypothetical protein OsJ_00400 [Oryza sativa Japonica Group]
Length = 514
Score = 128 bits (321), Expect = 9e-28
Identities = 58/90 (64%), Positives = 74/90 (82%)
Frame = -3
Query: 272 FFKWASTQTNYLHGPRAYNEILDILGRMKQVKLMQETFDEIPKDRQGSAINNKTFAILMH 93
FFKWA+ Y HG RAY E+LDILGRMK+V+LM++ FDEIP + + S + N+ FA+L++
Sbjct: 112 FFKWAAGLPQYNHGSRAYTEMLDILGRMKKVRLMRQLFDEIPVESRQSVVTNRMFAVLLN 171
Query: 92 RYSGAHKVQEAIGIFYKRIDYGFELDLIGF 3
RY+GAHKVQEAI +FYKR DYGFELDL+GF
Sbjct: 172 RYAGAHKVQEAIDMFYKRKDYGFELDLVGF 201
>ref|NP_001148062.1| GTP binding protein [Zea mays] gi|195615570|gb|ACG29615.1| GTP
binding protein [Zea mays]
Length = 535
Score = 127 bits (318), Expect = 2e-27
Identities = 57/90 (63%), Positives = 73/90 (81%)
Frame = -3
Query: 272 FFKWASTQTNYLHGPRAYNEILDILGRMKQVKLMQETFDEIPKDRQGSAINNKTFAILMH 93
FF WA+T Y HG RAY E+LDILGRMK+V+ M++ FDEIP++R+ + NK FA+L++
Sbjct: 130 FFNWAATLPGYAHGSRAYTEMLDILGRMKKVRHMRQLFDEIPEERRQVVVTNKMFAVLLN 189
Query: 92 RYSGAHKVQEAIGIFYKRIDYGFELDLIGF 3
RY+GAHKVQEAI +FY R DYGFELDL+GF
Sbjct: 190 RYAGAHKVQEAIEVFYLRKDYGFELDLVGF 219
>ref|NP_001130971.1| GTP binding protein [Zea mays] gi|194690592|gb|ACF79380.1| unknown
[Zea mays] gi|413947420|gb|AFW80069.1| GTP binding
protein [Zea mays]
Length = 535
Score = 127 bits (318), Expect = 2e-27
Identities = 57/90 (63%), Positives = 73/90 (81%)
Frame = -3
Query: 272 FFKWASTQTNYLHGPRAYNEILDILGRMKQVKLMQETFDEIPKDRQGSAINNKTFAILMH 93
FF WA+T Y HG RAY E+LDILGRMK+V+ M++ FDEIP++R+ + NK FA+L++
Sbjct: 130 FFNWAATLPGYAHGSRAYTEMLDILGRMKKVRHMRQLFDEIPEERRQVVVTNKMFAVLLN 189
Query: 92 RYSGAHKVQEAIGIFYKRIDYGFELDLIGF 3
RY+GAHKVQEAI +FY R DYGFELDL+GF
Sbjct: 190 RYAGAHKVQEAIEVFYLRKDYGFELDLVGF 219
>ref|XP_002457357.1| hypothetical protein SORBIDRAFT_03g005950 [Sorghum bicolor]
gi|241929332|gb|EES02477.1| hypothetical protein
SORBIDRAFT_03g005950 [Sorghum bicolor]
Length = 543
Score = 126 bits (317), Expect = 3e-27
Identities = 57/90 (63%), Positives = 73/90 (81%)
Frame = -3
Query: 272 FFKWASTQTNYLHGPRAYNEILDILGRMKQVKLMQETFDEIPKDRQGSAINNKTFAILMH 93
FF WA+T Y HG RAY E+LDILGRMK+V+ M++ FDEIP++R+ + NK FA+L++
Sbjct: 138 FFNWAATLPGYAHGSRAYTEMLDILGRMKKVRHMRQLFDEIPEERRVVVVTNKMFAVLLN 197
Query: 92 RYSGAHKVQEAIGIFYKRIDYGFELDLIGF 3
RY+GAHKVQEAI +FY R DYGFELDL+GF
Sbjct: 198 RYAGAHKVQEAIEVFYLRKDYGFELDLVGF 227
>ref|XP_004968227.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Setaria italica]
Length = 541
Score = 124 bits (311), Expect = 1e-26
Identities = 56/90 (62%), Positives = 71/90 (78%)
Frame = -3
Query: 272 FFKWASTQTNYLHGPRAYNEILDILGRMKQVKLMQETFDEIPKDRQGSAINNKTFAILMH 93
FF WA+ Y HG RAY E+LDILGRMK+V+LM++ FDEIP +R + N+ FA+L++
Sbjct: 136 FFNWAAGLPGYTHGSRAYTEMLDILGRMKKVRLMRQLFDEIPNERWEVVVTNRMFAVLLN 195
Query: 92 RYSGAHKVQEAIGIFYKRIDYGFELDLIGF 3
RY+GAHKVQEAI +FY R DYGFELDL+GF
Sbjct: 196 RYAGAHKVQEAIEVFYLRKDYGFELDLVGF 225
>gb|EMT24172.1| Putative pentatricopeptide repeat-containing protein [Aegilops
tauschii]
Length = 2407
Score = 100 bits (249), Expect = 2e-19
Identities = 44/74 (59%), Positives = 60/74 (81%)
Frame = -3
Query: 272 FFKWASTQTNYLHGPRAYNEILDILGRMKQVKLMQETFDEIPKDRQGSAINNKTFAILMH 93
FF WA+ +Y HGPR Y E+LDILGRMK+V+LM++ FD+IP+ R+G + N+ FA+L++
Sbjct: 337 FFNWAAGLPSYEHGPRTYTEMLDILGRMKKVRLMRQLFDKIPEQRRGLVVTNRMFAVLLN 396
Query: 92 RYSGAHKVQEAIGI 51
RY+GAHKVQEAI I
Sbjct: 397 RYAGAHKVQEAIEI 410
>emb|CAN62355.1| hypothetical protein VITISV_022418 [Vitis vinifera]
Length = 546
Score = 89.0 bits (219), Expect = 6e-16
Identities = 48/93 (51%), Positives = 63/93 (67%), Gaps = 3/93 (3%)
Frame = -3
Query: 272 FFKWAST---QTNYLHGPRAYNEILDILGRMKQVKLMQETFDEIPKDRQGSAINNKTFAI 102
FF WAS ++ Y G +NEILDILGRM++ M + FDE+ K R+G N +TF +
Sbjct: 138 FFNWASRCGXESGYSPGCGVHNEILDILGRMRRFHEMTQLFDEMSK-RKG-LXNERTFGV 195
Query: 101 LMHRYSGAHKVQEAIGIFYKRIDYGFELDLIGF 3
L++RY+ AHK +EA+ IFYKR GFELDLI F
Sbjct: 196 LLNRYAAAHKTEEAVKIFYKRKGLGFELDLIAF 228
>ref|XP_002282646.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Vitis vinifera]
Length = 546
Score = 87.0 bits (214), Expect = 2e-15
Identities = 47/93 (50%), Positives = 63/93 (67%), Gaps = 3/93 (3%)
Frame = -3
Query: 272 FFKWAST---QTNYLHGPRAYNEILDILGRMKQVKLMQETFDEIPKDRQGSAINNKTFAI 102
FF WAS ++ Y G +NEILDILGRM++ M + FDE+ K R+G +N +TF +
Sbjct: 138 FFNWASRCGIESGYSPGCGVHNEILDILGRMRRFHEMTQLFDEMSK-RKG-LVNERTFGV 195
Query: 101 LMHRYSGAHKVQEAIGIFYKRIDYGFELDLIGF 3
L++RY+ AHK +EA+ IF KR GFELDLI F
Sbjct: 196 LLNRYAAAHKTEEAVKIFNKRKGLGFELDLIAF 228
>ref|XP_004252116.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Solanum lycopersicum]
Length = 488
Score = 83.6 bits (205), Expect = 3e-14
Identities = 41/93 (44%), Positives = 61/93 (65%), Gaps = 3/93 (3%)
Frame = -3
Query: 272 FFKWASTQTN---YLHGPRAYNEILDILGRMKQVKLMQETFDEIPKDRQGSAINNKTFAI 102
FFKW N Y ++NEILDILGRM++ + + DE+ K +G+ +N KT+ I
Sbjct: 88 FFKWILAGENPCRYSPNTESFNEILDILGRMRRFDELNQVLDEMSK--RGNLVNEKTYGI 145
Query: 101 LMHRYSGAHKVQEAIGIFYKRIDYGFELDLIGF 3
+++RY+ AH+V++A FYKR ++G ELDLI F
Sbjct: 146 VINRYAAAHRVEDAKAFFYKRKNFGLELDLIAF 178
>ref|XP_006849942.1| hypothetical protein AMTR_s00022p00129420 [Amborella trichopoda]
gi|548853540|gb|ERN11523.1| hypothetical protein
AMTR_s00022p00129420 [Amborella trichopoda]
Length = 550
Score = 81.6 bits (200), Expect = 1e-13
Identities = 40/91 (43%), Positives = 58/91 (63%), Gaps = 1/91 (1%)
Frame = -3
Query: 272 FFKWASTQTNYLHGPRAYNEILDILGRMKQVKLMQETFDEIPKDRQG-SAINNKTFAILM 96
FF+WAS + NY H YN ++DILGRMK+ M E+ + G S + +TF IL+
Sbjct: 156 FFQWASNRGNYSHESGVYNVMIDILGRMKRFDEMWHLVKEMYSSKDGPSFVTERTFEILI 215
Query: 95 HRYSGAHKVQEAIGIFYKRIDYGFELDLIGF 3
+RY+ HKV++AI FYKR ++G +LD + F
Sbjct: 216 NRYAADHKVEKAIETFYKRENFGLKLDKVAF 246
>ref|XP_002532249.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223528067|gb|EEF30143.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 507
Score = 81.6 bits (200), Expect = 1e-13
Identities = 42/90 (46%), Positives = 59/90 (65%)
Frame = -3
Query: 272 FFKWASTQTNYLHGPRAYNEILDILGRMKQVKLMQETFDEIPKDRQGSAINNKTFAILMH 93
FF W S L G AYNEILDILG+M++ + + D + K R+G +N +T+ +L++
Sbjct: 100 FFNWVSKGGKVLMGSGAYNEILDILGKMRRFDELSQVLDIMSK-REG-LVNEETYRVLVN 157
Query: 92 RYSGAHKVQEAIGIFYKRIDYGFELDLIGF 3
RY+ AHKV+EAI IF R D G E+DL+ F
Sbjct: 158 RYAAAHKVEEAIEIFNTRRDIGLEIDLVSF 187
>gb|EOY13086.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
[Theobroma cacao]
Length = 534
Score = 79.3 bits (194), Expect = 5e-13
Identities = 38/90 (42%), Positives = 63/90 (70%)
Frame = -3
Query: 272 FFKWASTQTNYLHGPRAYNEILDILGRMKQVKLMQETFDEIPKDRQGSAINNKTFAILMH 93
FF+W S + G YNEILD+LG+M + + +++ FDE+ +R+G +N TF IL+H
Sbjct: 128 FFQWVSKKGENSLGFDVYNEILDVLGKMHRFEELRKVFDEM-LEREG-LVNEGTFKILLH 185
Query: 92 RYSGAHKVQEAIGIFYKRIDYGFELDLIGF 3
RY+ A KV++A+G+F +R ++GF+ D++ F
Sbjct: 186 RYAAADKVEDAMGVFNRRKEFGFKDDVVAF 215
>ref|XP_004488749.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15200-like [Cicer
arietinum]
Length = 503
Score = 79.0 bits (193), Expect = 6e-13
Identities = 36/82 (43%), Positives = 56/82 (68%)
Frame = -3
Query: 272 FFKWASTQTNYLHGPRAYNEILDILGRMKQVKLMQETFDEIPKDRQGSAINNKTFAILMH 93
FFKW S NY YNEIL+ILG+MK+ + + + DE+ + ++ +N +TF+IL+
Sbjct: 123 FFKWVSKTNNYTPSCHVYNEILNILGKMKRFEELHQVLDEMSQRKE--LVNEETFSILIR 180
Query: 92 RYSGAHKVQEAIGIFYKRIDYG 27
R+ AHKV+EAI +F++R +YG
Sbjct: 181 RFVAAHKVEEAINMFHRREEYG 202