BLASTX nr result
ID: Zingiber24_contig00047977
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00047977
(385 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004973954.1| PREDICTED: pentatricopeptide repeat-containi... 184 1e-44
ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containi... 178 6e-43
tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea m... 177 1e-42
ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [S... 176 2e-42
gb|EMT00538.1| hypothetical protein F775_11073 [Aegilops tauschii] 175 6e-42
ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group] g... 173 2e-41
ref|XP_002305733.2| hypothetical protein POPTR_0004s05810g, part... 171 7e-41
ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containi... 171 9e-41
emb|CBI30711.3| unnamed protein product [Vitis vinifera] 170 2e-40
ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containi... 170 2e-40
ref|XP_003629790.1| Pentatricopeptide repeat-containing protein ... 170 2e-40
gb|ESW20019.1| hypothetical protein PHAVU_006G174200g [Phaseolus... 169 4e-40
gb|EOY27956.1| Pentatricopeptide, putative [Theobroma cacao] 169 4e-40
ref|XP_004504288.1| PREDICTED: pentatricopeptide repeat-containi... 169 4e-40
ref|XP_006643885.1| PREDICTED: pentatricopeptide repeat-containi... 168 6e-40
ref|XP_003608008.1| Pentatricopeptide repeat-containing protein ... 168 6e-40
gb|AHB18405.1| pentatricopeptide repeat-containing protein [Goss... 167 1e-39
gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossyp... 167 1e-39
gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossyp... 167 1e-39
gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum] 167 1e-39
>ref|XP_004973954.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Setaria italica]
Length = 1088
Score = 184 bits (467), Expect = 1e-44
Identities = 87/124 (70%), Positives = 104/124 (83%)
Frame = -2
Query: 372 RPNSVTMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALLLACL 193
+PN+VTM+CILPA ASLSSL++G +IHA LR LED Y +NALVDMYVKCGAL++A L
Sbjct: 713 KPNAVTMTCILPAAASLSSLERGREIHAYALRRGYLEDNYTSNALVDMYVKCGALMVARL 772
Query: 192 LFDRISKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACSHSGL 13
LFDR++KK+ I+WT+MIAGYGMHGHG AI LF++MR G+EPD SFSAILYAC HSGL
Sbjct: 773 LFDRLTKKNLISWTIMIAGYGMHGHGKDAIALFEQMRGSGVEPDSASFSAILYACCHSGL 832
Query: 12 LNEG 1
NEG
Sbjct: 833 RNEG 836
Score = 73.6 bits (179), Expect = 3e-11
Identities = 39/113 (34%), Positives = 63/113 (55%)
Frame = -2
Query: 354 MSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALLLACLLFDRIS 175
+SC+L +ASL S+ G + + + E+ VTNAL+ +Y +CG + A +F+ +
Sbjct: 205 ISCVLKCIASLGSIMDGEVVRGLLEKLGLGEECAVTNALIAVYTRCGRMEDAMQVFNSMH 264
Query: 174 KKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACSHSG 16
+D I+W MI+G +G A+ LF KM EG+E V+ ++L AC G
Sbjct: 265 SRDAISWNSMISGCFSNGWHGRAVDLFSKMWSEGVEISSVTMVSVLPACVELG 317
Score = 71.6 bits (174), Expect = 1e-10
Identities = 42/125 (33%), Positives = 68/125 (54%)
Frame = -2
Query: 375 LRPNSVTMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALLLAC 196
+RP+ ++ L A AS SL +G +H +R + V NAL++MYV+CG A
Sbjct: 612 IRPDVFAVTSALHAFASDESLKQGKSVHGYAIRNGIEKLLPVANALMEMYVRCGNTEEAR 671
Query: 195 LLFDRISKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACSHSG 16
L+FDR++ +D I+W +I GY + N + +LF M + +P+ V+ + IL A +
Sbjct: 672 LIFDRVTNRDIISWNTLIGGYSRNNLANESFSLFIDMLLQ-FKPNAVTMTCILPAAASLS 730
Query: 15 LLNEG 1
L G
Sbjct: 731 SLERG 735
Score = 67.8 bits (164), Expect = 1e-09
Identities = 38/119 (31%), Positives = 61/119 (51%)
Frame = -2
Query: 375 LRPNSVTMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALLLAC 196
+ P+ T+SC+L + SL + G+ H +++ V NAL+ Y K + A
Sbjct: 410 ITPDEHTISCLLKCITSLFRVRDGLMAHGYLIKLGFGAQCAVCNALISFYAKSNRIEDAL 469
Query: 195 LLFDRISKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACSHS 19
+FD + +D I+W +I+G +G N AI LF M +G E D + ++L ACS S
Sbjct: 470 EVFDGMPHQDIISWNSIISGCTSNGLNNEAIELFLTMWIQGQELDSATLLSVLPACSQS 528
Score = 58.9 bits (141), Expect = 7e-07
Identities = 39/120 (32%), Positives = 59/120 (49%), Gaps = 10/120 (8%)
Frame = -2
Query: 366 NSVTMSCILPAVASLSSLDKGIQIHAQILRYARLE---------DGYVTNALVDMYVKCG 214
+SVTM +LPA L G +H ++ L D + + LV MYVKCG
Sbjct: 302 SSVTMVSVLPACVELGYELVGKVVHGYSVKAGLLWELESLERGIDEVLGSKLVFMYVKCG 361
Query: 213 ALLLACLLFDRISKKDRI-TWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAIL 37
+ A +FD +S K + W +++ GY G ++ LF++M GI PDE + S +L
Sbjct: 362 DMASARTVFDVMSSKSNVHVWNLLMGGYAKAGEFQESLLLFEQMHDLGITPDEHTISCLL 421
>ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Brachypodium distachyon]
Length = 870
Score = 178 bits (452), Expect = 6e-43
Identities = 86/125 (68%), Positives = 102/125 (81%)
Frame = -2
Query: 375 LRPNSVTMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALLLAC 196
LRPN+VTM+CILPA ASLSSL++G ++HA LR LED +V NAL+DMYVKCGALLLA
Sbjct: 494 LRPNAVTMTCILPAAASLSSLERGREMHAYALRRGYLEDDFVANALIDMYVKCGALLLAR 553
Query: 195 LLFDRISKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACSHSG 16
LFDR+S K+ I+WT+M+AGYGMHG G AI LF++MR GI PD SFSAILYACSHSG
Sbjct: 554 RLFDRLSNKNLISWTIMVAGYGMHGRGRDAIALFEQMRVSGIAPDAASFSAILYACSHSG 613
Query: 15 LLNEG 1
L +EG
Sbjct: 614 LRDEG 618
Score = 73.6 bits (179), Expect = 3e-11
Identities = 43/124 (34%), Positives = 65/124 (52%)
Frame = -2
Query: 372 RPNSVTMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALLLACL 193
RP+ ++ L A A L G +H +R + VTNAL++MYVKCG + A L
Sbjct: 395 RPDIFAITSALHAFAGNELLKHGKSVHGYAIRNGMEKVLAVTNALMEMYVKCGNMEEAKL 454
Query: 192 LFDRISKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACSHSGL 13
+FD + KD I+W +I GY + N A +LF +M + + P+ V+ + IL A +
Sbjct: 455 IFDGVVSKDMISWNTLIGGYSRNNLANEAFSLFTEMLLQ-LRPNAVTMTCILPAAASLSS 513
Query: 12 LNEG 1
L G
Sbjct: 514 LERG 517
Score = 72.8 bits (177), Expect = 4e-11
Identities = 42/122 (34%), Positives = 66/122 (54%)
Frame = -2
Query: 375 LRPNSVTMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALLLAC 196
+RP++ T+SC+L +A L S++ G +H + + V NAL+ Y K A
Sbjct: 192 VRPDAYTISCVLKCIAGLGSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAI 251
Query: 195 LLFDRISKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACSHSG 16
L+FD + +D I+W MI+G +G + AI LF +M EG E D + ++L AC+
Sbjct: 252 LVFDGMPHRDVISWNSMISGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELH 311
Query: 15 LL 10
LL
Sbjct: 312 LL 313
Score = 62.8 bits (151), Expect = 5e-08
Identities = 36/122 (29%), Positives = 60/122 (49%)
Frame = -2
Query: 366 NSVTMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALLLACLLF 187
+S T+ +LPA A L L G +H ++ + + N L+DMY C +F
Sbjct: 296 DSATLLSVLPACAELHLLFLGRVVHGYSVKTGFISQTSLANVLLDMYSNCSDWRSTNKIF 355
Query: 186 DRISKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACSHSGLLN 7
+ +K+ ++WT MI Y G + LF++M EG PD + ++ L+A + + LL
Sbjct: 356 RNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQEMGLEGTRPDIFAITSALHAFAGNELLK 415
Query: 6 EG 1
G
Sbjct: 416 HG 417
>tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
Length = 1091
Score = 177 bits (449), Expect = 1e-42
Identities = 86/124 (69%), Positives = 102/124 (82%)
Frame = -2
Query: 372 RPNSVTMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALLLACL 193
RPN+VTM+CILPA AS+SSL++G +IHA LR LED Y +NALVDMYVKCGALL+A +
Sbjct: 716 RPNAVTMTCILPAAASISSLERGREIHAYALRRGFLEDSYASNALVDMYVKCGALLVARV 775
Query: 192 LFDRISKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACSHSGL 13
LFDR++KK+ I+WT+MIAGYGMHG G AI LF++MR GIEPD SFSAILYAC HSGL
Sbjct: 776 LFDRLTKKNLISWTIMIAGYGMHGFGKHAIALFEQMRGSGIEPDAASFSAILYACCHSGL 835
Query: 12 LNEG 1
EG
Sbjct: 836 AAEG 839
Score = 76.6 bits (187), Expect = 3e-12
Identities = 42/118 (35%), Positives = 66/118 (55%)
Frame = -2
Query: 369 PNSVTMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALLLACLL 190
P++ +SC+L V+SL SL +G IH + + + V NAL+ +Y +CG + A +
Sbjct: 202 PDAHAVSCVLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARV 261
Query: 189 FDRISKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACSHSG 16
FD + +D I+W MI G +G TA+ LF KM +G E V+ ++L AC+ G
Sbjct: 262 FDSMHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLG 319
Score = 71.6 bits (174), Expect = 1e-10
Identities = 42/125 (33%), Positives = 66/125 (52%)
Frame = -2
Query: 375 LRPNSVTMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALLLAC 196
+RP+ ++ L A A SL +G +H +R + V NAL++MYVKC + A
Sbjct: 615 IRPDVFAVTSALHAFAGDESLKQGKSVHGYTIRNGMEKLLPVANALMEMYVKCRNVEEAR 674
Query: 195 LLFDRISKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACSHSG 16
L+FDR++ KD I+W +I GY + N + +LF M + P+ V+ + IL A +
Sbjct: 675 LIFDRVTNKDVISWNTLIGGYSRNNFPNESFSLFSDMLLQ-FRPNAVTMTCILPAAASIS 733
Query: 15 LLNEG 1
L G
Sbjct: 734 SLERG 738
Score = 69.7 bits (169), Expect = 4e-10
Identities = 38/119 (31%), Positives = 64/119 (53%)
Frame = -2
Query: 375 LRPNSVTMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALLLAC 196
+ P+ +SC+L + LS G+ H I++ V NAL+ Y K + A
Sbjct: 413 IAPDEHAISCLLKCITCLSCARDGLVAHGYIVKLGFGAQCAVCNALISFYAKSNMIGDAV 472
Query: 195 LLFDRISKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACSHS 19
L+F+R+ ++D I+W +I+G +G + AI LF +M +G E D V+ ++L AC+ S
Sbjct: 473 LVFNRMPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQELDSVTLLSVLPACAQS 531
Score = 63.2 bits (152), Expect = 4e-08
Identities = 43/138 (31%), Positives = 68/138 (49%), Gaps = 16/138 (11%)
Frame = -2
Query: 366 NSVTMSCILPAVASLSSLDKGIQIHAQILRYARL----------EDGYVTNALVDMYVKC 217
+SVT+ +LPA A L G +H ++ L +D + + LV MYVKC
Sbjct: 304 SSVTVLSVLPACAGLGYGLIGKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKC 363
Query: 216 GALLLACLLFDRISKKDRI-TWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAI 40
G + A +FD +S K + W +++ GY G +++LF +M GI PDE + S +
Sbjct: 364 GDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCL 423
Query: 39 L-----YACSHSGLLNEG 1
L +C+ GL+ G
Sbjct: 424 LKCITCLSCARDGLVAHG 441
Score = 58.2 bits (139), Expect = 1e-06
Identities = 34/122 (27%), Positives = 60/122 (49%)
Frame = -2
Query: 366 NSVTMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALLLACLLF 187
+SVT+ +LPA A G +H ++ + + + NAL+DMY C +F
Sbjct: 517 DSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQIF 576
Query: 186 DRISKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACSHSGLLN 7
+ +K+ ++WT MI Y G + L ++M +GI PD + ++ L+A + L
Sbjct: 577 RSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSALHAFAGDESLK 636
Query: 6 EG 1
+G
Sbjct: 637 QG 638
>ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
gi|241942201|gb|EES15346.1| hypothetical protein
SORBIDRAFT_07g026890 [Sorghum bicolor]
Length = 1084
Score = 176 bits (447), Expect = 2e-42
Identities = 84/124 (67%), Positives = 103/124 (83%)
Frame = -2
Query: 372 RPNSVTMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALLLACL 193
+PN+VTM+CILPAVAS+SSL++G +IHA LR LED Y +NALVDMYVKCGALL+A +
Sbjct: 709 KPNTVTMTCILPAVASISSLERGREIHAYALRRGFLEDSYTSNALVDMYVKCGALLVARV 768
Query: 192 LFDRISKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACSHSGL 13
LFDR++KK+ I+WT+MIAGYGMHG G A+ LF++MR G+EPD SFSAILYAC HSGL
Sbjct: 769 LFDRLTKKNLISWTIMIAGYGMHGCGKDAVALFEQMRGSGVEPDTASFSAILYACCHSGL 828
Query: 12 LNEG 1
EG
Sbjct: 829 TAEG 832
Score = 79.7 bits (195), Expect = 4e-13
Identities = 42/118 (35%), Positives = 67/118 (56%)
Frame = -2
Query: 369 PNSVTMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALLLACLL 190
P++ +SC+L +ASL S+ +G IH + + E V NAL+ +Y +CG + A +
Sbjct: 196 PDAHAVSCVLKCIASLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQV 255
Query: 189 FDRISKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACSHSG 16
FD + +D I+W I+GY +G + A+ LF KM EG E V+ ++L AC+ G
Sbjct: 256 FDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELG 313
Score = 68.9 bits (167), Expect = 6e-10
Identities = 37/119 (31%), Positives = 62/119 (52%)
Frame = -2
Query: 375 LRPNSVTMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALLLAC 196
+ P+ +SC+L + LS G+ H +++ V NAL+ Y K + A
Sbjct: 406 ITPDEHALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAV 465
Query: 195 LLFDRISKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACSHS 19
L+FDR+ +D I+W +I+G +G + AI LF +M +G E D + ++L AC+ S
Sbjct: 466 LVFDRMPHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARS 524
Score = 67.4 bits (163), Expect = 2e-09
Identities = 38/125 (30%), Positives = 65/125 (52%)
Frame = -2
Query: 375 LRPNSVTMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALLLAC 196
++P+ ++ +L A SL +G +H +R + V NAL++MYV C + A
Sbjct: 608 IKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPVANALMEMYVNCRNMEEAR 667
Query: 195 LLFDRISKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACSHSG 16
L+FD ++ KD I+W +I GY + N + +LF M + +P+ V+ + IL A +
Sbjct: 668 LVFDHVTNKDIISWNTLIGGYSRNNFANESFSLFSDMLLQ-FKPNTVTMTCILPAVASIS 726
Query: 15 LLNEG 1
L G
Sbjct: 727 SLERG 731
Score = 57.0 bits (136), Expect = 3e-06
Identities = 41/137 (29%), Positives = 65/137 (47%), Gaps = 15/137 (10%)
Frame = -2
Query: 366 NSVTMSCILPAVASLSSLDKGIQIHAQILRYARLED---------GYVTNALVDMYVKCG 214
+SVT+ +LPA A L G +H ++ L D + + LV MYVKCG
Sbjct: 298 SSVTVLSVLPACAELGFELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCG 357
Query: 213 ALLLACLLFDRISKKDRI-TWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAIL 37
+ A +FD + K + W +++ GY ++ LF++M GI PDE + S +L
Sbjct: 358 DMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLL 417
Query: 36 -----YACSHSGLLNEG 1
+C+ GL+ G
Sbjct: 418 KCITCLSCARDGLVAHG 434
Score = 57.0 bits (136), Expect = 3e-06
Identities = 32/122 (26%), Positives = 61/122 (50%)
Frame = -2
Query: 366 NSVTMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALLLACLLF 187
+S T+ +LPA A G +H ++ + + + NAL+DMY C +F
Sbjct: 510 DSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIF 569
Query: 186 DRISKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACSHSGLLN 7
+++K+ ++WT MI Y G + L ++M +GI+PD + +++L+ + L
Sbjct: 570 RNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAVTSVLHGFAGDESLK 629
Query: 6 EG 1
+G
Sbjct: 630 QG 631
>gb|EMT00538.1| hypothetical protein F775_11073 [Aegilops tauschii]
Length = 1172
Score = 175 bits (443), Expect = 6e-42
Identities = 85/124 (68%), Positives = 100/124 (80%)
Frame = -2
Query: 372 RPNSVTMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALLLACL 193
RPN+VTMSCILPA ASLSSL++G ++H LR LED +V NAL+DMYVKCGALLLA
Sbjct: 727 RPNAVTMSCILPAAASLSSLERGREMHTYALRRGYLEDDFVANALMDMYVKCGALLLARR 786
Query: 192 LFDRISKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACSHSGL 13
LFDR+S K+ I+WT+M+AGYGMHG G AI LF++MR GI PD SFSAILYACSHSGL
Sbjct: 787 LFDRLSSKNLISWTIMVAGYGMHGRGRDAIALFEQMRTSGIMPDAASFSAILYACSHSGL 846
Query: 12 LNEG 1
+EG
Sbjct: 847 RDEG 850
Score = 72.0 bits (175), Expect = 8e-11
Identities = 37/120 (30%), Positives = 67/120 (55%)
Frame = -2
Query: 375 LRPNSVTMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALLLAC 196
+RP++ T+SC+L +A L S+ G +H + + V NAL+ +Y +CG A
Sbjct: 192 VRPDAYTISCVLKCIAGLGSIADGEVVHGYLEKLGFGSQCAVGNALMALYSRCGCNEDAL 251
Query: 195 LLFDRISKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACSHSG 16
+F+ + ++D I+W +I+G +G A+ +M +EG+E D V+ ++L AC+ G
Sbjct: 252 RVFEGMPQRDAISWNSVISGCFSNGWHGRAVEHLSEMWFEGLEIDSVTMLSVLPACAELG 311
Score = 70.5 bits (171), Expect = 2e-10
Identities = 42/114 (36%), Positives = 60/114 (52%)
Frame = -2
Query: 342 LPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALLLACLLFDRISKKDR 163
L A A SL +G +HA +R + V NAL++MY KCG + A L+FD + KD
Sbjct: 637 LHAFAGNESLKEGKSVHAYAIRNGMEKVLPVVNALMEMYAKCGNMEEARLIFDGVMSKDV 696
Query: 162 ITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACSHSGLLNEG 1
I+W +I GY + N A +LF +M + P+ V+ S IL A + L G
Sbjct: 697 ISWNTLIGGYSRNNLANEAFSLFTEMLLQ-FRPNAVTMSCILPAAASLSSLERG 749
Score = 68.6 bits (166), Expect = 8e-10
Identities = 38/119 (31%), Positives = 63/119 (52%)
Frame = -2
Query: 381 SSLRPNSVTMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALLL 202
S + P+ T+SC++ V SL S G+ +H +L+ V NA++ Y K
Sbjct: 402 SGIAPDEHTVSCLVKCVTSLYSARDGLVVHGYLLKLGFGAQCAVCNAMISFYAKSNMTED 461
Query: 201 ACLLFDRISKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACS 25
A L+FD + +D I+W +I+G +G + AI LF +M +G E D + ++L AC+
Sbjct: 462 ALLVFDGMPHRDVISWNSIISGCTFNGLHSKAIELFVRMWLQGQELDSATLLSVLPACA 520
Score = 62.4 bits (150), Expect = 6e-08
Identities = 44/123 (35%), Positives = 61/123 (49%), Gaps = 10/123 (8%)
Frame = -2
Query: 375 LRPNSVTMSCILPAVASLSSLDKGIQIHAQILRYARL---------EDGYVTNALVDMYV 223
L +SVTM +LPA A L G IH ++ L D + + LV MYV
Sbjct: 293 LEIDSVTMLSVLPACAELGYELVGRVIHGYSVKTGLLWELESLERGVDENLGSKLVFMYV 352
Query: 222 KCGALLLACLLFDRISKKDRI-TWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFS 46
KCG L A +FD +S K I W +++ GY G ++ LF+KM GI PDE + S
Sbjct: 353 KCGELGYARKVFDAMSSKSSIHVWNLLMGGYAKVGEFQESLFLFEKMHDSGIAPDEHTVS 412
Query: 45 AIL 37
++
Sbjct: 413 CLV 415
Score = 58.9 bits (141), Expect = 7e-07
Identities = 31/112 (27%), Positives = 56/112 (50%)
Frame = -2
Query: 366 NSVTMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALLLACLLF 187
+S T+ +LPA A L GI +H ++ + + + N L+DMY C +F
Sbjct: 508 DSATLLSVLPACAQLRHWFLGIVVHGYSVKTGLIGETSLANVLLDMYSNCSDWRSTNKIF 567
Query: 186 DRISKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYA 31
+ +K+ ++WT +I Y G + + ++M EGI PD + ++ L+A
Sbjct: 568 RNMDQKNVVSWTAIITSYTRAGLFDKVAGVLQEMALEGIRPDTFAITSALHA 619
>ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat
protein -like [Oryza sativa Japonica Group]
gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa
Japonica Group]
Length = 658
Score = 173 bits (438), Expect = 2e-41
Identities = 84/125 (67%), Positives = 102/125 (81%)
Frame = -2
Query: 375 LRPNSVTMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALLLAC 196
LRPN+VTM+CILPA ASLSSL++G ++HA +R LED +V NALVDMYVKCGALLLA
Sbjct: 282 LRPNAVTMACILPAAASLSSLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLAR 341
Query: 195 LLFDRISKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACSHSG 16
LFD ++ K+ I+WT+MIAGYGMHG G AI LF++M+ GI+PD SFSAILYACSHSG
Sbjct: 342 RLFDMLTNKNLISWTIMIAGYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSG 401
Query: 15 LLNEG 1
L +EG
Sbjct: 402 LRDEG 406
Score = 79.0 bits (193), Expect = 6e-13
Identities = 45/125 (36%), Positives = 66/125 (52%)
Frame = -2
Query: 375 LRPNSVTMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALLLAC 196
+RP+ ++ L A A SL G +H +R E V NAL++MYVKCG + A
Sbjct: 182 IRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEAR 241
Query: 195 LLFDRISKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACSHSG 16
+FD ++KKD I+W +I GY N A TLF +M + + P+ V+ + IL A +
Sbjct: 242 FIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEMLLQ-LRPNAVTMACILPAAASLS 300
Query: 15 LLNEG 1
L G
Sbjct: 301 SLERG 305
Score = 61.2 bits (147), Expect = 1e-07
Identities = 35/122 (28%), Positives = 59/122 (48%)
Frame = -2
Query: 366 NSVTMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALLLACLLF 187
+S T+ ++PA G +H +R + + + NAL+DMY C +F
Sbjct: 84 DSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSLGNALLDMYSNCSDWRSTNKIF 143
Query: 186 DRISKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACSHSGLLN 7
+ +K+ ++WT MI Y GH + LF++M EGI PD + ++ L A + + L
Sbjct: 144 RNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGIRPDVFAITSALDAFAGNESLK 203
Query: 6 EG 1
G
Sbjct: 204 HG 205
Score = 57.4 bits (137), Expect = 2e-06
Identities = 29/96 (30%), Positives = 51/96 (53%)
Frame = -2
Query: 306 GIQIHAQILRYARLEDGYVTNALVDMYVKCGALLLACLLFDRISKKDRITWTVMIAGYGM 127
G+ +H +++Y V NAL+ Y K + A ++FD + ++D I+W +I G
Sbjct: 3 GLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCAS 62
Query: 126 HGHGNTAITLFKKMRYEGIEPDEVSFSAILYACSHS 19
+G + A+ LF +M EG E D + +++ AC S
Sbjct: 63 NGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQS 98
>ref|XP_002305733.2| hypothetical protein POPTR_0004s05810g, partial [Populus
trichocarpa] gi|550340410|gb|EEE86244.2| hypothetical
protein POPTR_0004s05810g, partial [Populus trichocarpa]
Length = 778
Score = 171 bits (434), Expect = 7e-41
Identities = 84/125 (67%), Positives = 97/125 (77%)
Frame = -2
Query: 375 LRPNSVTMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALLLAC 196
++P+ T++CILPA ASL+SLD+G ++H ILR D V NALVDMYVKCG +LA
Sbjct: 402 MKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANALVDMYVKCGVPVLAR 461
Query: 195 LLFDRISKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACSHSG 16
LLFD I KD ITWTVMIAGYGMHG GN AIT F +MR GIEPDEVSF +ILYACSHSG
Sbjct: 462 LLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVSFISILYACSHSG 521
Query: 15 LLNEG 1
LL+EG
Sbjct: 522 LLDEG 526
Score = 84.0 bits (206), Expect = 2e-14
Identities = 44/122 (36%), Positives = 71/122 (58%)
Frame = -2
Query: 366 NSVTMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALLLACLLF 187
NS T+SC+L A+L S+ +G +H +L+ V N+L+ Y+K + +A LF
Sbjct: 103 NSHTVSCVLKCFAALGSVKEGKWVHGFLLKLGLGSYNAVVNSLIAFYLKIRRVDVARKLF 162
Query: 186 DRISKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACSHSGLLN 7
D +S +D I+W MI+GY +G + LFKKM Y G++ D + +IL AC++ G ++
Sbjct: 163 DELSNRDVISWNSMISGYVANGFSEKGVELFKKMLYLGVDMDLATMVSILQACANCGDVS 222
Query: 6 EG 1
G
Sbjct: 223 LG 224
Score = 80.5 bits (197), Expect = 2e-13
Identities = 44/119 (36%), Positives = 64/119 (53%)
Frame = -2
Query: 357 TMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALLLACLLFDRI 178
TM IL A A+ + G +H ++ N L+DMY KCG L A L+FD +
Sbjct: 207 TMVSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLM 266
Query: 177 SKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACSHSGLLNEG 1
S + +TWT +IA Y G + AI LF +M EG+ PD + + +L+AC+ +G L G
Sbjct: 267 SVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENG 325
Score = 74.7 bits (182), Expect = 1e-11
Identities = 44/128 (34%), Positives = 69/128 (53%)
Frame = -2
Query: 384 QSSLRPNSVTMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALL 205
+ + P+ T++ +L A A SL+ G +H I + +V NAL+DMY KCG++
Sbjct: 299 REGVSPDIFTITTVLHACACNGSLENGKDVHNYIRENDMQSNIFVCNALMDMYAKCGSME 358
Query: 204 LACLLFDRISKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACS 25
A +F + KD I+W MI GY + N A++LF M E ++PD + + IL AC+
Sbjct: 359 DANSVFLEMPVKDIISWNTMIGGYSKNSLPNEALSLFGDMVLE-MKPDGTTLACILPACA 417
Query: 24 HSGLLNEG 1
L+ G
Sbjct: 418 SLASLDRG 425
Score = 61.6 bits (148), Expect = 1e-07
Identities = 39/121 (32%), Positives = 60/121 (49%)
Frame = -2
Query: 363 SVTMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALLLACLLFD 184
S T IL A L SL G ++H+ I D + + LV MYV CG L L+FD
Sbjct: 3 SRTCCSILQLSAELKSLQDGKKVHSFICSSGISIDSVLGSKLVFMYVTCGDLREGRLIFD 62
Query: 183 RISKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACSHSGLLNE 4
+I + W +M+ GY G +++LF++M G+E + + S +L + G + E
Sbjct: 63 KIRNEKVFLWNLMMNGYTKIGDFKESVSLFRQMLDLGVEVNSHTVSCVLKCFAALGSVKE 122
Query: 3 G 1
G
Sbjct: 123 G 123
>ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 171 bits (433), Expect = 9e-41
Identities = 84/128 (65%), Positives = 103/128 (80%)
Frame = -2
Query: 384 QSSLRPNSVTMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALL 205
Q + +PNS+TM+CILPA ASL++L++G +IH ILR D +V NALVDMY+KCGAL
Sbjct: 445 QYNSKPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALG 504
Query: 204 LACLLFDRISKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACS 25
LA LLFD I +KD ++WTVMIAGYGMHG+G+ AI F +MR GIEPDEVSF +ILYACS
Sbjct: 505 LARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACS 564
Query: 24 HSGLLNEG 1
HSGLL+EG
Sbjct: 565 HSGLLDEG 572
Score = 80.9 bits (198), Expect = 2e-13
Identities = 43/128 (33%), Positives = 69/128 (53%)
Frame = -2
Query: 384 QSSLRPNSVTMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALL 205
+ + P+ T++ IL A A L+ G +H I D +V+NAL+DMY KCG++
Sbjct: 345 KEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMG 404
Query: 204 LACLLFDRISKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACS 25
A +F + KD ++W MI GY + N A+ LF +M+Y +P+ ++ + IL AC+
Sbjct: 405 DAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQYNS-KPNSITMACILPACA 463
Query: 24 HSGLLNEG 1
L G
Sbjct: 464 SLAALERG 471
Score = 75.9 bits (185), Expect = 5e-12
Identities = 39/119 (32%), Positives = 67/119 (56%)
Frame = -2
Query: 357 TMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALLLACLLFDRI 178
TM ++ ++ L G +H ++ + ++ + N L+DMY K G L A +F+ +
Sbjct: 253 TMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETM 312
Query: 177 SKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACSHSGLLNEG 1
++ ++WT MIAGY G + ++ LF +M EGI PD + + IL+AC+ +GLL G
Sbjct: 313 GERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENG 371
Score = 57.4 bits (137), Expect = 2e-06
Identities = 37/133 (27%), Positives = 65/133 (48%), Gaps = 14/133 (10%)
Frame = -2
Query: 357 TMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALLLACLLFDRI 178
T +L A L S+ G +IH+ I DG + + LV MYV CG L +FD++
Sbjct: 103 TYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKV 162
Query: 177 SKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGI--------------EPDEVSFSAI 40
+ + W +++ GY G+ +++LFK+MR GI + D +S++++
Sbjct: 163 ANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSM 222
Query: 39 LYACSHSGLLNEG 1
+ +GL +G
Sbjct: 223 ISGYVSNGLSEKG 235
>emb|CBI30711.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 170 bits (431), Expect = 2e-40
Identities = 84/128 (65%), Positives = 102/128 (79%)
Frame = -2
Query: 384 QSSLRPNSVTMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALL 205
+ L PNS+TM+CILPA ASL++L++G +IH ILR D +V NALVDMY+KCGAL
Sbjct: 318 KEDLFPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALG 377
Query: 204 LACLLFDRISKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACS 25
LA LLFD I +KD ++WTVMIAGYGMHG+G+ AI F +MR GIEPDEVSF +ILYACS
Sbjct: 378 LARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACS 437
Query: 24 HSGLLNEG 1
HSGLL+EG
Sbjct: 438 HSGLLDEG 445
Score = 61.6 bits (148), Expect = 1e-07
Identities = 29/84 (34%), Positives = 48/84 (57%)
Frame = -2
Query: 252 VTNALVDMYVKCGALLLACLLFDRISKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEG 73
+ N L+DMY K G L A +F+ + ++ ++WT MIAGY G + ++ LF +M E
Sbjct: 261 LNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKED 320
Query: 72 IEPDEVSFSAILYACSHSGLLNEG 1
+ P+ ++ + IL AC+ L G
Sbjct: 321 LFPNSITMACILPACASLAALERG 344
Score = 57.4 bits (137), Expect = 2e-06
Identities = 37/133 (27%), Positives = 65/133 (48%), Gaps = 14/133 (10%)
Frame = -2
Query: 357 TMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALLLACLLFDRI 178
T +L A L S+ G +IH+ I DG + + LV MYV CG L +FD++
Sbjct: 103 TYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKV 162
Query: 177 SKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGI--------------EPDEVSFSAI 40
+ + W +++ GY G+ +++LFK+MR GI + D +S++++
Sbjct: 163 ANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSM 222
Query: 39 LYACSHSGLLNEG 1
+ +GL +G
Sbjct: 223 ISGYVSNGLSEKG 235
>ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 170 bits (430), Expect = 2e-40
Identities = 83/128 (64%), Positives = 99/128 (77%)
Frame = -2
Query: 384 QSSLRPNSVTMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALL 205
Q +P+ T++CILPA ASL++LDKG +IH LR ED YVTNA+VDMYVKCG L+
Sbjct: 547 QRESKPDGTTVACILPACASLAALDKGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLV 606
Query: 204 LACLLFDRISKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACS 25
LA LFD I KD ++WTVMIAGYGMHG+G+ AI F +MR GIEPDEVSF +ILYACS
Sbjct: 607 LARSLFDMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISILYACS 666
Query: 24 HSGLLNEG 1
HSGLL+EG
Sbjct: 667 HSGLLDEG 674
Score = 78.2 bits (191), Expect = 1e-12
Identities = 44/120 (36%), Positives = 70/120 (58%), Gaps = 1/120 (0%)
Frame = -2
Query: 357 TMSCILPAVASLSSLDKGIQIHAQILRYARLE-DGYVTNALVDMYVKCGALLLACLLFDR 181
TM + A A++ +L G +H+ ++ A L+ + N L+DMY KCG L A +F+R
Sbjct: 354 TMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFER 413
Query: 180 ISKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACSHSGLLNEG 1
+ +K ++WT MI GY G + AI LF +M+ G+ PD + ++IL AC+ +G L G
Sbjct: 414 MDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSG 473
Score = 77.0 bits (188), Expect = 2e-12
Identities = 45/123 (36%), Positives = 68/123 (55%)
Frame = -2
Query: 369 PNSVTMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALLLACLL 190
P+ ++ IL A A +L G +H I + +V+NAL DMY KCG++ A +
Sbjct: 452 PDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDV 511
Query: 189 FDRISKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACSHSGLL 10
F + KKD I+W MI GY + N A+TLF +M+ E +PD + + IL AC+ L
Sbjct: 512 FSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRES-KPDGTTVACILPACASLAAL 570
Query: 9 NEG 1
++G
Sbjct: 571 DKG 573
Score = 70.1 bits (170), Expect = 3e-10
Identities = 38/122 (31%), Positives = 65/122 (53%)
Frame = -2
Query: 375 LRPNSVTMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALLLAC 196
++PNS T S IL A+++ +++G Q+H I + V N+L+ Y + A
Sbjct: 247 IKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQ 306
Query: 195 LLFDRISKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACSHSG 16
LFD ++ +D I+W MI+GY +G + I +F KM G++ D + + AC++ G
Sbjct: 307 KLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIG 366
Query: 15 LL 10
L
Sbjct: 367 TL 368
Score = 64.3 bits (155), Expect = 2e-08
Identities = 39/115 (33%), Positives = 61/115 (53%)
Frame = -2
Query: 345 ILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALLLACLLFDRISKKD 166
IL A S+ G ++ + I + DG + LV MYVKCG L ++FD++S+
Sbjct: 156 ILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESK 215
Query: 165 RITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACSHSGLLNEG 1
W +MI+ Y G+ +I LFK+M GI+P+ +FS+IL + + EG
Sbjct: 216 IFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEG 270
>ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 908
Score = 170 bits (430), Expect = 2e-40
Identities = 84/128 (65%), Positives = 97/128 (75%)
Frame = -2
Query: 384 QSSLRPNSVTMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALL 205
Q +P+ +TM+C+LPA A L++LDKG +IH ILR D +V ALVDMY KCG L+
Sbjct: 490 QKQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLV 549
Query: 204 LACLLFDRISKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACS 25
LA LLFD I KKD I+WTVMIAGYGMHG GN AI+ F +MR GIEPDE SFSAIL ACS
Sbjct: 550 LAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACS 609
Query: 24 HSGLLNEG 1
HSGLLNEG
Sbjct: 610 HSGLLNEG 617
Score = 89.0 bits (219), Expect = 6e-16
Identities = 46/125 (36%), Positives = 78/125 (62%)
Frame = -2
Query: 375 LRPNSVTMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALLLAC 196
+RP+ T++ I+ A A SSLDKG +H+ +++ + VTNAL++MY KCG++ A
Sbjct: 393 VRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEAR 452
Query: 195 LLFDRISKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACSHSG 16
L+F +I KD ++W MI GY + N A+ LF M+ + +PD+++ + +L AC+
Sbjct: 453 LVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQKQ-FKPDDITMACVLPACAGLA 511
Query: 15 LLNEG 1
L++G
Sbjct: 512 ALDKG 516
Score = 70.9 bits (172), Expect = 2e-10
Identities = 39/119 (32%), Positives = 69/119 (57%)
Frame = -2
Query: 357 TMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALLLACLLFDRI 178
T+ +L A A++ +L G +H ++ E+ +N L+DMY KCG L A +F ++
Sbjct: 298 TLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKM 357
Query: 177 SKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACSHSGLLNEG 1
++WT +IA Y G + AI LF +M+ +G+ PD + ++I++AC+ S L++G
Sbjct: 358 GDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKG 416
Score = 68.2 bits (165), Expect = 1e-09
Identities = 36/122 (29%), Positives = 65/122 (53%)
Frame = -2
Query: 366 NSVTMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALLLACLLF 187
N T +C+L A+L + + ++H +L+ + V N+L+ Y K G + A LF
Sbjct: 194 NCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLF 253
Query: 186 DRISKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACSHSGLLN 7
D +S+ D ++W MI G ++G + +F +M G+E D + ++L AC++ G L+
Sbjct: 254 DELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLS 313
Query: 6 EG 1
G
Sbjct: 314 LG 315
Score = 55.8 bits (133), Expect = 6e-06
Identities = 32/114 (28%), Positives = 58/114 (50%)
Frame = -2
Query: 345 ILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALLLACLLFDRISKKD 166
+L A SL+ G ++H+ I+ D + LV MYV CG L+ +FD+I
Sbjct: 100 VLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDK 159
Query: 165 RITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACSHSGLLNE 4
W ++++ Y G+ +++LFKKM+ G+ + +F+ +L + G + E
Sbjct: 160 VFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKE 213
>gb|ESW20019.1| hypothetical protein PHAVU_006G174200g [Phaseolus vulgaris]
Length = 871
Score = 169 bits (428), Expect = 4e-40
Identities = 82/128 (64%), Positives = 99/128 (77%)
Frame = -2
Query: 384 QSSLRPNSVTMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALL 205
Q RP+ +TM+C+LPA SL++LD G IH ILR L D YV NAL+DMYVKCG+L+
Sbjct: 493 QEESRPDGITMACVLPACGSLAALDIGRGIHGCILRNGYLSDLYVVNALIDMYVKCGSLV 552
Query: 204 LACLLFDRISKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACS 25
A LFD IS+KD I+WTVMI GYGMHG GN AI F+KMR GI+PDE++F++ILYACS
Sbjct: 553 HAQFLFDMISEKDLISWTVMITGYGMHGFGNEAIATFQKMRTVGIKPDEITFTSILYACS 612
Query: 24 HSGLLNEG 1
HSGLLNEG
Sbjct: 613 HSGLLNEG 620
Score = 79.0 bits (193), Expect = 6e-13
Identities = 44/123 (35%), Positives = 70/123 (56%)
Frame = -2
Query: 369 PNSVTMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALLLACLL 190
P+ +M+ +L A A +SLDKG +H + V+NAL++MY KCG++ A L+
Sbjct: 398 PDVYSMTSVLHACAHSNSLDKGRDLHNYFRKNNVTLSLPVSNALMNMYAKCGSMEEAYLV 457
Query: 189 FDRISKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACSHSGLL 10
F +I KD ++W +MI GY + N A+ LF +M+ E PD ++ + +L AC L
Sbjct: 458 FSQIPVKDIVSWNIMIGGYSKNTLPNEALKLFSEMQEES-RPDGITMACVLPACGSLAAL 516
Query: 9 NEG 1
+ G
Sbjct: 517 DIG 519
Score = 76.3 bits (186), Expect = 4e-12
Identities = 40/119 (33%), Positives = 68/119 (57%)
Frame = -2
Query: 357 TMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALLLACLLFDRI 178
T+ +L A A++ SL G +H ++ + N L+DMY KCG L A +F ++
Sbjct: 301 TLVNVLVACANVGSLSFGRAVHGHGVKACFGREVRFNNTLLDMYSKCGNLNDAIQVFGKM 360
Query: 177 SKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACSHSGLLNEG 1
+ ++WT +I+ Y G + AI LF +M +G+ PD S +++L+AC+HS L++G
Sbjct: 361 GQTTVVSWTSLISAYVREGLYDDAIRLFYEMECKGVSPDVYSMTSVLHACAHSNSLDKG 419
Score = 64.7 bits (156), Expect = 1e-08
Identities = 39/122 (31%), Positives = 61/122 (50%)
Frame = -2
Query: 366 NSVTMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALLLACLLF 187
NS T SCIL + +L + IH I + V N+L+ Y K G + A LF
Sbjct: 197 NSYTFSCILNCLRTLGRVGDCKSIHGYIYKLGFGSYNTVVNSLIATYFKSGGVDNAHKLF 256
Query: 186 DRISKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACSHSGLLN 7
D + +D ++W MI+G M+G +TA+ F +M + D + +L AC++ G L+
Sbjct: 257 DELGDRDVVSWNSMISGCVMNGFSHTALDFFIQMLILRVGVDLATLVNVLVACANVGSLS 316
Query: 6 EG 1
G
Sbjct: 317 FG 318
>gb|EOY27956.1| Pentatricopeptide, putative [Theobroma cacao]
Length = 874
Score = 169 bits (428), Expect = 4e-40
Identities = 83/125 (66%), Positives = 98/125 (78%)
Frame = -2
Query: 375 LRPNSVTMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALLLAC 196
L+P+S T++CILPA ASL++L++G +IH ILR D +V NALVD+YVKCG L LA
Sbjct: 498 LKPDSRTLACILPACASLAALERGKEIHGHILRNGYFSDRHVANALVDLYVKCGVLALAR 557
Query: 195 LLFDRISKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACSHSG 16
LLFD IS KD ++WTVMIAGYGMHG N AIT F +MR GIEPDEVSF +ILYACSHSG
Sbjct: 558 LLFDMISSKDLVSWTVMIAGYGMHGFANEAITTFNEMRDAGIEPDEVSFISILYACSHSG 617
Query: 15 LLNEG 1
LL EG
Sbjct: 618 LLEEG 622
Score = 79.7 bits (195), Expect = 4e-13
Identities = 41/119 (34%), Positives = 69/119 (57%)
Frame = -2
Query: 357 TMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALLLACLLFDRI 178
T+ +L A+ +L G +HA ++ N L+DMY KCG L A +F+++
Sbjct: 303 TIVTVLVGCANSGTLSLGKAVHALAIKACFERKLNFNNTLLDMYSKCGDLDGALRVFEKM 362
Query: 177 SKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACSHSGLLNEG 1
+++ ++WT MIAGY G + AI L ++M EG++ D V+ +++L+AC+ SG L G
Sbjct: 363 GERNVVSWTSMIAGYTRDGQSDGAIRLLQQMEREGVKLDVVAITSVLHACARSGSLENG 421
Score = 77.0 bits (188), Expect = 2e-12
Identities = 41/128 (32%), Positives = 68/128 (53%)
Frame = -2
Query: 384 QSSLRPNSVTMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALL 205
+ + +S T SCIL +A+ L +G ++H +L+ V N+L+ Y K +
Sbjct: 193 KKGIEVDSYTFSCILKCLAASGGLKEGERVHGYLLKLGFGSYNSVVNSLITFYFKGKRVE 252
Query: 204 LACLLFDRISKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACS 25
A LFD + +D I+W MI+GY +G + +FK+M Y GI+ D + +L C+
Sbjct: 253 SASELFDELIDRDVISWNSMISGYVSNGLAEKGLEVFKEMLYLGIDVDLATIVTVLVGCA 312
Query: 24 HSGLLNEG 1
+SG L+ G
Sbjct: 313 NSGTLSLG 320
Score = 70.9 bits (172), Expect = 2e-10
Identities = 42/120 (35%), Positives = 64/120 (53%)
Frame = -2
Query: 360 VTMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALLLACLLFDR 181
V ++ +L A A SL+ G +H I + +V NAL+DMY KCG++ A +F R
Sbjct: 403 VAITSVLHACARSGSLENGKDVHDYIKANNVESNLFVCNALMDMYAKCGSMEDANSIFSR 462
Query: 180 ISKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACSHSGLLNEG 1
++ KD I+W MI GY + N A+ + M E ++PD + + IL AC+ L G
Sbjct: 463 MAVKDIISWNTMIGGYSKNCLPNEALKMLAAMLKE-LKPDSRTLACILPACASLAALERG 521
Score = 69.7 bits (169), Expect = 4e-10
Identities = 48/130 (36%), Positives = 61/130 (46%), Gaps = 4/130 (3%)
Frame = -2
Query: 378 SLRPNSV----TMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGA 211
S+ PNS T IL A L SL G ++H+ I D + + LV YV CG
Sbjct: 90 SMSPNSELESKTYCSILQLCADLKSLKDGKKVHSIINSNGVAVDEVLGSKLVSFYVTCGD 149
Query: 210 LLLACLLFDRISKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYA 31
L +FD + KK W M+ Y G +I LFK M +GIE D +FS IL
Sbjct: 150 LKEGRGIFDEMEKKKVFLWNYMLNEYAKFGDFKESIYLFKMMMKKGIEVDSYTFSCILKC 209
Query: 30 CSHSGLLNEG 1
+ SG L EG
Sbjct: 210 LAASGGLKEG 219
>ref|XP_004504288.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like isoform X1 [Cicer arietinum]
gi|502140652|ref|XP_004504289.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like isoform X2 [Cicer arietinum]
Length = 879
Score = 169 bits (428), Expect = 4e-40
Identities = 83/125 (66%), Positives = 97/125 (77%)
Frame = -2
Query: 375 LRPNSVTMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALLLAC 196
L+P+ +TM+C+LPA A L++LDKG +IH ILR D +V ALVDMY KCG L+LA
Sbjct: 503 LKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQ 562
Query: 195 LLFDRISKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACSHSG 16
+LFD I KKD I+WTVMIAGYGMHG GN AI+ F KMR GIEPDE SF+AIL ACSHSG
Sbjct: 563 ILFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNKMRIAGIEPDESSFTAILNACSHSG 622
Query: 15 LLNEG 1
LLNEG
Sbjct: 623 LLNEG 627
Score = 90.5 bits (223), Expect = 2e-16
Identities = 45/125 (36%), Positives = 79/125 (63%)
Frame = -2
Query: 375 LRPNSVTMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALLLAC 196
+RP+ T++ I+ A A +SLDKG +H+ +++ + + + V NAL++MY KCG++ A
Sbjct: 403 VRPDIYTVTSIVHACACSNSLDKGRDVHSYVIKNSMVSNLPVANALMNMYAKCGSMEEAR 462
Query: 195 LLFDRISKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACSHSG 16
L+F +I KD ++W MI GY + N A+ LF M E ++PD+++ + +L AC+
Sbjct: 463 LVFSQIPAKDIVSWNTMIGGYSKNSLPNGALELFSDM-VEQLKPDDITMACVLPACAGLA 521
Query: 15 LLNEG 1
L++G
Sbjct: 522 ALDKG 526
Score = 70.1 bits (170), Expect = 3e-10
Identities = 39/119 (32%), Positives = 70/119 (58%)
Frame = -2
Query: 357 TMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALLLACLLFDRI 178
T+ +L A A++ +L G +HA ++ + +N L+DMY KCG L A +F ++
Sbjct: 308 TLVSVLVACANIGNLSLGRALHAFGVKAPFSGEVVFSNTLLDMYSKCGNLNGATEVFVKM 367
Query: 177 SKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACSHSGLLNEG 1
+ ++WT +IA Y G + AI LF +M+ +G+ PD + ++I++AC+ S L++G
Sbjct: 368 GETTIVSWTSIIAAYVREGLYDDAIGLFDEMQSKGVRPDIYTVTSIVHACACSNSLDKG 426
Score = 63.9 bits (154), Expect = 2e-08
Identities = 34/122 (27%), Positives = 63/122 (51%)
Frame = -2
Query: 366 NSVTMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALLLACLLF 187
+S T +C+L +L + + ++H +L+ V N+L+ Y K G + A LF
Sbjct: 204 DSYTFTCVLKCFTALGKVKECKRVHGYVLKLGFGSSTAVVNSLIAAYFKFGGVESAHNLF 263
Query: 186 DRISKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACSHSGLLN 7
D +S +D ++W MI G ++G + +F +M G+ D + ++L AC++ G L+
Sbjct: 264 DELSDRDVVSWNSMINGCVVNGFSRNGLEIFIQMLILGVGVDLTTLVSVLVACANIGNLS 323
Query: 6 EG 1
G
Sbjct: 324 LG 325
Score = 55.1 bits (131), Expect = 1e-05
Identities = 36/118 (30%), Positives = 55/118 (46%)
Frame = -2
Query: 357 TMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALLLACLLFDRI 178
T +L A SL+ G +IH I+ G + LV MYV CG L+ +FD I
Sbjct: 106 TYCSVLQLCAERKSLEDGKRIHFIIVSKGIPIKGALGAKLVFMYVNCGDLVKGREIFDEI 165
Query: 177 SKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACSHSGLLNE 4
W +M++ Y G+ ++ LF KM+ GI D +F+ +L + G + E
Sbjct: 166 LNDKVFLWNLMMSEYAKIGNYRESLGLFNKMQKLGIAGDSYTFTCVLKCFTALGKVKE 223
>ref|XP_006643885.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Oryza brachyantha]
Length = 658
Score = 168 bits (426), Expect = 6e-40
Identities = 81/125 (64%), Positives = 101/125 (80%)
Frame = -2
Query: 375 LRPNSVTMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALLLAC 196
L PN+VTM+CILPA +SLSSL++G ++HA +R LED +V N LVDMYVKCGALLLA
Sbjct: 282 LSPNAVTMACILPAASSLSSLERGREMHAYAVRRGYLEDKFVANTLVDMYVKCGALLLAR 341
Query: 195 LLFDRISKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACSHSG 16
LFD+++ K+ I+WT+MIAGYGMHG G AI LF++M+ GI+PD SFSAILYACSHSG
Sbjct: 342 RLFDKLTNKNLISWTIMIAGYGMHGRGRDAIALFEQMKGNGIQPDAGSFSAILYACSHSG 401
Query: 15 LLNEG 1
L +EG
Sbjct: 402 LRDEG 406
Score = 80.5 bits (197), Expect = 2e-13
Identities = 45/125 (36%), Positives = 67/125 (53%)
Frame = -2
Query: 375 LRPNSVTMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALLLAC 196
+RP+ ++ L A A SL G +H +R E V NAL++MYVKCG + A
Sbjct: 182 IRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGMEEVLPVANALMEMYVKCGYMEEAR 241
Query: 195 LLFDRISKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACSHSG 16
+FD ++ KD I+W +I GY + N A TLF++M + + P+ V+ + IL A S
Sbjct: 242 FIFDHVTNKDTISWNTLIGGYSRNNLANEAFTLFREMLLQ-LSPNAVTMACILPAASSLS 300
Query: 15 LLNEG 1
L G
Sbjct: 301 SLERG 305
Score = 61.2 bits (147), Expect = 1e-07
Identities = 36/122 (29%), Positives = 59/122 (48%)
Frame = -2
Query: 366 NSVTMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALLLACLLF 187
+S T+ +LPA A G +H ++ + + + NAL+DMY C +F
Sbjct: 84 DSTTLLSVLPACAQSHYSFIGRVVHGYSVKTGLISETSLGNALLDMYSNCSDWRSTNKIF 143
Query: 186 DRISKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACSHSGLLN 7
+ +K ++WT MI Y GH + LF++M EGI PD + ++ L A + + L
Sbjct: 144 RNMEQKTVVSWTAMITSYIRAGHFDKVAGLFQEMGLEGIRPDVFAITSALDAFAGNESLK 203
Query: 6 EG 1
G
Sbjct: 204 HG 205
Score = 60.8 bits (146), Expect = 2e-07
Identities = 31/96 (32%), Positives = 52/96 (54%)
Frame = -2
Query: 306 GIQIHAQILRYARLEDGYVTNALVDMYVKCGALLLACLLFDRISKKDRITWTVMIAGYGM 127
G+ +H +++Y V NAL+ Y K + A ++FD + ++D I+W +I G
Sbjct: 3 GLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALVVFDEMPRRDIISWNSIIGGCAS 62
Query: 126 HGHGNTAITLFKKMRYEGIEPDEVSFSAILYACSHS 19
+G + AI LF +M EG E D + ++L AC+ S
Sbjct: 63 NGLSHKAIELFVRMWLEGQELDSTTLLSVLPACAQS 98
>ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 168 bits (426), Expect = 6e-40
Identities = 83/128 (64%), Positives = 96/128 (75%)
Frame = -2
Query: 384 QSSLRPNSVTMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALL 205
Q +P+ +TM+C+LPA A L++LDKG +IH ILR D +V ALVDMY KCG L+
Sbjct: 765 QKQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLV 824
Query: 204 LACLLFDRISKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACS 25
LA LLFD I KKD I+WTVMIAGYGMHG GN AI+ F +MR GIEPDE SFS IL ACS
Sbjct: 825 LAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNACS 884
Query: 24 HSGLLNEG 1
HSGLLNEG
Sbjct: 885 HSGLLNEG 892
Score = 90.5 bits (223), Expect = 2e-16
Identities = 46/125 (36%), Positives = 78/125 (62%)
Frame = -2
Query: 375 LRPNSVTMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALLLAC 196
+RP+ T++ I+ A A SSLDKG +H+ +++ + VTNAL++MY KCG++ A
Sbjct: 668 VRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEAR 727
Query: 195 LLFDRISKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACSHSG 16
L+F +I KD ++W MI GY + N A+ LF M+ + +PD+++ + +L AC+
Sbjct: 728 LVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQKQ-FKPDDITMACVLPACAGLA 786
Query: 15 LLNEG 1
L++G
Sbjct: 787 ALDKG 791
Score = 69.3 bits (168), Expect = 5e-10
Identities = 39/119 (32%), Positives = 68/119 (57%)
Frame = -2
Query: 357 TMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALLLACLLFDRI 178
T+ +L A A++ +L G +H ++ E+ +N L+DMY KCG L A +F ++
Sbjct: 573 TLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKM 632
Query: 177 SKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACSHSGLLNEG 1
++WT IA Y G + AI LF +M+ +G+ PD + ++I++AC+ S L++G
Sbjct: 633 GDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKG 691
Score = 63.9 bits (154), Expect = 2e-08
Identities = 35/122 (28%), Positives = 64/122 (52%)
Frame = -2
Query: 366 NSVTMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALLLACLLF 187
N T +C+L A+L + + ++H +L+ + V N+L+ Y K G + A LF
Sbjct: 469 NCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLF 528
Query: 186 DRISKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACSHSGLLN 7
D +S+ D ++W MI G ++G + +F +M G+E D + ++L A ++ G L+
Sbjct: 529 DELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLS 588
Query: 6 EG 1
G
Sbjct: 589 LG 590
Score = 55.5 bits (132), Expect = 7e-06
Identities = 32/114 (28%), Positives = 58/114 (50%)
Frame = -2
Query: 345 ILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALLLACLLFDRISKKD 166
+L A SL+ G ++H+ I+ D + LV MYV CG L+ +FD+I
Sbjct: 375 VLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDK 434
Query: 165 RITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACSHSGLLNE 4
W ++++ Y G+ +++LFKKM+ G+ + +F+ +L + G + E
Sbjct: 435 VFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKE 488
>gb|AHB18405.1| pentatricopeptide repeat-containing protein [Gossypium hirsutum]
Length = 875
Score = 167 bits (424), Expect = 1e-39
Identities = 83/125 (66%), Positives = 98/125 (78%)
Frame = -2
Query: 375 LRPNSVTMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALLLAC 196
L+P+S TM+CILPA ASLS+L++G +IH ILR D +V NALVD+YVKCG L LA
Sbjct: 498 LKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLAR 557
Query: 195 LLFDRISKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACSHSG 16
LLFD I KD ++WTVMIAGYGMHG+GN AI F +MR GIEPDEVSF +ILYACSHSG
Sbjct: 558 LLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSG 617
Query: 15 LLNEG 1
LL +G
Sbjct: 618 LLEQG 622
Score = 79.0 bits (193), Expect = 6e-13
Identities = 41/119 (34%), Positives = 72/119 (60%)
Frame = -2
Query: 357 TMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALLLACLLFDRI 178
T+ +L A+ +L G +H+ ++ + +N L+DMY KCG L A +F+++
Sbjct: 303 TIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKM 362
Query: 177 SKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACSHSGLLNEG 1
+++ ++WT MIAGY G + AI L ++M EG++ D V+ ++IL+AC+ SG L+ G
Sbjct: 363 GERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNG 421
Score = 78.6 bits (192), Expect = 8e-13
Identities = 42/128 (32%), Positives = 69/128 (53%)
Frame = -2
Query: 384 QSSLRPNSVTMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALL 205
+ + NS T SC+L A+L SL +G +H +L+ V N+L+ Y K
Sbjct: 193 EKGIEVNSYTFSCVLKCFAALGSLKEGECVHGYLLKLGFGSCNSVVNSLIAFYFKGKRPE 252
Query: 204 LACLLFDRISKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACS 25
A LFD++ +D I+W MI+GY +G + ++K+M Y GI+ D + ++L C+
Sbjct: 253 SASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCA 312
Query: 24 HSGLLNEG 1
+SG L+ G
Sbjct: 313 NSGTLSLG 320
Score = 71.2 bits (173), Expect = 1e-10
Identities = 43/120 (35%), Positives = 62/120 (51%)
Frame = -2
Query: 360 VTMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALLLACLLFDR 181
V ++ IL A A SLD G +H I + +V NAL+DMY KCG++ A +F
Sbjct: 403 VAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFST 462
Query: 180 ISKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACSHSGLLNEG 1
+ KD I+W M+ GY + N A+ F M E ++PD + + IL AC+ L G
Sbjct: 463 MVVKDIISWNTMVGGYSKNCLPNEALKTFAAMLKE-LKPDSRTMACILPACASLSALERG 521
Score = 59.7 bits (143), Expect = 4e-07
Identities = 39/119 (32%), Positives = 56/119 (47%)
Frame = -2
Query: 357 TMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALLLACLLFDRI 178
T +L A L SL G ++H+ I + D + LV Y CG L +FD +
Sbjct: 101 TYGSVLQLCAGLKSLTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTM 160
Query: 177 SKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACSHSGLLNEG 1
KK+ W M++ Y G +I LFK M +GIE + +FS +L + G L EG
Sbjct: 161 EKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEVNSYTFSCVLKCFAALGSLKEG 219
>gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
Length = 667
Score = 167 bits (424), Expect = 1e-39
Identities = 83/125 (66%), Positives = 98/125 (78%)
Frame = -2
Query: 375 LRPNSVTMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALLLAC 196
L+P+S TM+CILPA ASLS+L++G +IH ILR D +V NALVD+YVKCG L LA
Sbjct: 290 LKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLAR 349
Query: 195 LLFDRISKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACSHSG 16
LLFD I KD ++WTVMIAGYGMHG+GN AI F +MR GIEPDEVSF +ILYACSHSG
Sbjct: 350 LLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSG 409
Query: 15 LLNEG 1
LL +G
Sbjct: 410 LLEQG 414
Score = 78.6 bits (192), Expect = 8e-13
Identities = 41/119 (34%), Positives = 71/119 (59%)
Frame = -2
Query: 357 TMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALLLACLLFDRI 178
T+ +L A +L G +H+ ++ + +N L+DMY KCG L A +F+++
Sbjct: 115 TIISVLVGCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKM 174
Query: 177 SKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACSHSGLLNEG 1
+++ ++WT MIAGY G + AI L ++M EG++ D V+ ++IL+AC+ SG L+ G
Sbjct: 175 GERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNG 233
>gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 167 bits (424), Expect = 1e-39
Identities = 83/125 (66%), Positives = 98/125 (78%)
Frame = -2
Query: 375 LRPNSVTMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALLLAC 196
L+P+S TM+CILPA ASLS+L++G +IH ILR D +V NALVD+YVKCG L LA
Sbjct: 428 LKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLAR 487
Query: 195 LLFDRISKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACSHSG 16
LLFD I KD ++WTVMIAGYGMHG+GN AI F +MR GIEPDEVSF +ILYACSHSG
Sbjct: 488 LLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSG 547
Query: 15 LLNEG 1
LL +G
Sbjct: 548 LLEQG 552
Score = 79.0 bits (193), Expect = 6e-13
Identities = 41/119 (34%), Positives = 72/119 (60%)
Frame = -2
Query: 357 TMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALLLACLLFDRI 178
T+ +L A+ +L G +H+ ++ + +N L+DMY KCG L A +F+++
Sbjct: 253 TIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKM 312
Query: 177 SKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACSHSGLLNEG 1
+++ ++WT MIAGY G + AI L ++M EG++ D V+ ++IL+AC+ SG L+ G
Sbjct: 313 GERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNG 371
>gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
Length = 805
Score = 167 bits (423), Expect = 1e-39
Identities = 82/125 (65%), Positives = 98/125 (78%)
Frame = -2
Query: 375 LRPNSVTMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALLLAC 196
L+P+S TM+C+LPA ASLS+L++G +IH ILR D +V NALVD+YVKCG L LA
Sbjct: 428 LKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLAR 487
Query: 195 LLFDRISKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACSHSG 16
LLFD I KD ++WTVMIAGYGMHG+GN AI F +MR GIEPDEVSF +ILYACSHSG
Sbjct: 488 LLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSG 547
Query: 15 LLNEG 1
LL +G
Sbjct: 548 LLEQG 552
Score = 79.7 bits (195), Expect = 4e-13
Identities = 41/119 (34%), Positives = 72/119 (60%)
Frame = -2
Query: 357 TMSCILPAVASLSSLDKGIQIHAQILRYARLEDGYVTNALVDMYVKCGALLLACLLFDRI 178
T+ +L A+ +L G +H+ ++ + +N L+DMY KCG L A +F+++
Sbjct: 253 TIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKM 312
Query: 177 SKKDRITWTVMIAGYGMHGHGNTAITLFKKMRYEGIEPDEVSFSAILYACSHSGLLNEG 1
+++ ++WT MIAGY G + AI L ++M EG++ D V+ ++IL+AC+ SG L+ G
Sbjct: 313 GERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNG 371