BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00047913
         (334 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_006273074.1| hypothetical protein [Fig badnavirus 1] gi|3...    68   1e-09
gb|AER42637.1| DNA-binding protein [Fig badnavirus 1] gi|3548322...    68   1e-09
gb|AER45344.1| P2 [Fig badnavirus 1] gi|381144399|gb|AFF58904.1|...    68   1e-09
gb|AER45360.1| P2 [Fig badnavirus 1]                                   67   2e-09
gb|AER45350.1| P2 [Fig badnavirus 1] gi|354990611|gb|AER45354.1|...    67   3e-09
gb|ACE74697.1| unknown [Citrus yellow mosaic virus] gi|198385720...    66   5e-09
gb|ACE76863.1| unknown [Citrus yellow mosaic virus]                    65   9e-09
gb|ACE76857.1| unknown [Citrus yellow mosaic virus]                    65   9e-09
gb|AER00537.1| ORF II [Citrus yellow mosaic virus] gi|353453400|...    64   2e-08
gb|ACB87155.1| unknown [Citrus yellow mosaic virus]                    64   2e-08
ref|YP_009002584.1| hypothetical protein [Hibiscus bacilliform v...    64   3e-08
gb|ACB87149.1| unknown [Citrus yellow mosaic virus]                    64   3e-08
gb|ACO55657.1| unknown [Citrus yellow mosaic virus]                    62   6e-08
ref|NP_569152.1| hypothetical protein CYMVgp2 [Citrus yellow mos...    62   6e-08
ref|YP_009002583.1| hypothetical protein [Hibiscus bacilliform v...    57   3e-06

>ref|YP_006273074.1| hypothetical protein [Fig badnavirus 1] gi|333493964|gb|AEF56563.1|
           hypothetical protein [Fig badnavirus 1]
          Length = 135

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 32/57 (56%), Positives = 41/57 (71%)
 Frame = +2

Query: 116 NYTITKSTLSYKEAVKAIEQIESPTVGFAKPGEYQGPTSGNSAIIKQNNTQIQLLVQ 286
           +Y +++ T SYKEA+KA E IESP  GF +P ++QG TS     IKQNNT IQLL+Q
Sbjct: 3   SYIVSQGTNSYKEAIKATEGIESPAAGFVRPADFQGGTSAARVQIKQNNTLIQLLIQ 59


>gb|AER42637.1| DNA-binding protein [Fig badnavirus 1] gi|354832281|gb|AER42639.1|
           DNA-binding protein [Fig badnavirus 1]
           gi|354832284|gb|AER42641.1| DNA-binding protein [Fig
           badnavirus 1] gi|354832287|gb|AER42643.1| DNA-binding
           protein [Fig badnavirus 1] gi|354832290|gb|AER42645.1|
           DNA-binding protein [Fig badnavirus 1]
           gi|354990563|gb|AER45322.1| P2 [Fig badnavirus 1]
           gi|354990566|gb|AER45324.1| P2 [Fig badnavirus 1]
           gi|354990569|gb|AER45326.1| P2 [Fig badnavirus 1]
           gi|354990572|gb|AER45328.1| P2 [Fig badnavirus 1]
           gi|354990575|gb|AER45330.1| P2 [Fig badnavirus 1]
           gi|354990578|gb|AER45332.1| P2 [Fig badnavirus 1]
           gi|354990581|gb|AER45334.1| P2 [Fig badnavirus 1]
           gi|354990584|gb|AER45336.1| P2 [Fig badnavirus 1]
           gi|354990587|gb|AER45338.1| P2 [Fig badnavirus 1]
           gi|354990590|gb|AER45340.1| P2 [Fig badnavirus 1]
           gi|354990593|gb|AER45342.1| P2 [Fig badnavirus 1]
           gi|354990599|gb|AER45346.1| P2 [Fig badnavirus 1]
           gi|354990602|gb|AER45348.1| P2 [Fig badnavirus 1]
           gi|354990608|gb|AER45352.1| P2 [Fig badnavirus 1]
           gi|354990614|gb|AER45356.1| P2 [Fig badnavirus 1]
           gi|354990617|gb|AER45358.1| P2 [Fig badnavirus 1]
           gi|354990623|gb|AER45362.1| P2 [Fig badnavirus 1]
           gi|354990626|gb|AER45364.1| P2 [Fig badnavirus 1]
           gi|354990629|gb|AER45366.1| P2 [Fig badnavirus 1]
           gi|354990632|gb|AER45368.1| P2 [Fig badnavirus 1]
           gi|354990635|gb|AER45370.1| P2 [Fig badnavirus 1]
           gi|354990638|gb|AER45372.1| P2 [Fig badnavirus 1]
           gi|354990641|gb|AER45374.1| P2 [Fig badnavirus 1]
           gi|381144387|gb|AFF58896.1| putative DNA-binding protein
           [Fig badnavirus 1] gi|381144390|gb|AFF58898.1| putative
           DNA-binding protein [Fig badnavirus 1]
           gi|381144393|gb|AFF58900.1| putative DNA-binding protein
           [Fig badnavirus 1] gi|381144396|gb|AFF58902.1| putative
           DNA-binding protein [Fig badnavirus 1]
           gi|381144408|gb|AFF58910.1| putative DNA-binding protein
           [Fig badnavirus 1] gi|381144411|gb|AFF58912.1| putative
           DNA-binding protein [Fig badnavirus 1]
           gi|381144414|gb|AFF58914.1| putative DNA-binding protein
           [Fig badnavirus 1] gi|381144417|gb|AFF58916.1| putative
           DNA-binding protein [Fig badnavirus 1]
          Length = 135

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 32/57 (56%), Positives = 41/57 (71%)
 Frame = +2

Query: 116 NYTITKSTLSYKEAVKAIEQIESPTVGFAKPGEYQGPTSGNSAIIKQNNTQIQLLVQ 286
           +Y +++ T SYKEA+KA E IESP  GF +P ++QG TS     IKQNNT IQLL+Q
Sbjct: 3   SYIVSQGTNSYKEAIKATEGIESPAAGFVRPADFQGGTSAARVQIKQNNTLIQLLIQ 59


>gb|AER45344.1| P2 [Fig badnavirus 1] gi|381144399|gb|AFF58904.1| putative
           DNA-binding protein [Fig badnavirus 1]
           gi|381144402|gb|AFF58906.1| putative DNA-binding protein
           [Fig badnavirus 1] gi|381144405|gb|AFF58908.1| putative
           DNA-binding protein [Fig badnavirus 1]
          Length = 135

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 32/57 (56%), Positives = 41/57 (71%)
 Frame = +2

Query: 116 NYTITKSTLSYKEAVKAIEQIESPTVGFAKPGEYQGPTSGNSAIIKQNNTQIQLLVQ 286
           +Y +++ T SYKEA+KA E IESP  GF +P ++QG TS     IKQNNT IQLL+Q
Sbjct: 3   SYIVSQGTNSYKEAIKATEGIESPAAGFVRPADFQGGTSAARVQIKQNNTFIQLLIQ 59


>gb|AER45360.1| P2 [Fig badnavirus 1]
          Length = 135

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 32/57 (56%), Positives = 41/57 (71%)
 Frame = +2

Query: 116 NYTITKSTLSYKEAVKAIEQIESPTVGFAKPGEYQGPTSGNSAIIKQNNTQIQLLVQ 286
           +Y +++ T SYKEA+KA E IESP  GF +P ++QG TS     IKQNNT IQLL+Q
Sbjct: 3   SYIVSQGTNSYKEAIKAPEGIESPATGFVRPADFQGGTSAARVQIKQNNTLIQLLIQ 59


>gb|AER45350.1| P2 [Fig badnavirus 1] gi|354990611|gb|AER45354.1| P2 [Fig
           badnavirus 1]
          Length = 135

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 31/57 (54%), Positives = 41/57 (71%)
 Frame = +2

Query: 116 NYTITKSTLSYKEAVKAIEQIESPTVGFAKPGEYQGPTSGNSAIIKQNNTQIQLLVQ 286
           +Y +++ T SY+EA+KA E IESP  GF +P ++QG TS     IKQNNT IQLL+Q
Sbjct: 3   SYIVSQGTNSYQEAIKATEGIESPAAGFVRPADFQGGTSAARVQIKQNNTLIQLLIQ 59


>gb|ACE74697.1| unknown [Citrus yellow mosaic virus] gi|198385720|gb|ACH86206.1|
           unknown [Citrus yellow mosaic virus]
          Length = 138

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 33/73 (45%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
 Frame = +2

Query: 116 NYTITKSTLSYKEAVKAIEQIESPTVGFAKPGEYQGPTSGNSAIIKQNNTQIQLLVQ-TL 292
           NY  T+ T +YK A++A E I SP++GF  P EY G  +G  A+IKQNN  IQL+V+ ++
Sbjct: 2   NYQTTEKTPTYKRALEATEPINSPSLGFVNPEEYSGGITGTKALIKQNNLLIQLVVELSV 61

Query: 293 KVSGISRQTSRLS 331
            V+ +S Q ++L+
Sbjct: 62  NVNTLSDQVAQLA 74


>gb|ACE76863.1| unknown [Citrus yellow mosaic virus]
          Length = 137

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 32/73 (43%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
 Frame = +2

Query: 116 NYTITKSTLSYKEAVKAIEQIESPTVGFAKPGEYQGPTSGNSAIIKQNNTQIQLLVQ-TL 292
           NY  T+ T +YK A++A E I SP +GF  P +Y G  +G  A+IKQNN  IQL+V+ ++
Sbjct: 2   NYQATEKTPTYKRALEATESINSPALGFINPEDYSGGITGTKALIKQNNLLIQLVVEFSV 61

Query: 293 KVSGISRQTSRLS 331
            V+ +S Q ++L+
Sbjct: 62  NVNSLSDQVAQLT 74


>gb|ACE76857.1| unknown [Citrus yellow mosaic virus]
          Length = 137

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 32/72 (44%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
 Frame = +2

Query: 119 YTITKSTLSYKEAVKAIEQIESPTVGFAKPGEYQGPTSGNSAIIKQNNTQIQLLVQ-TLK 295
           Y +T+ T +YK A+ A E I SP++GF  P EY G  +G  A+IKQNN  IQL+V+ ++ 
Sbjct: 3   YQVTEKTPTYKRALAATEPINSPSLGFVNPEEYSGGITGTKALIKQNNLLIQLVVELSVN 62

Query: 296 VSGISRQTSRLS 331
           V+ +S Q ++L+
Sbjct: 63  VNSLSDQVAQLT 74


>gb|AER00537.1| ORF II [Citrus yellow mosaic virus] gi|353453400|gb|AER00543.1| ORF
           II [Citrus yellow mosaic virus]
          Length = 137

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 32/72 (44%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
 Frame = +2

Query: 119 YTITKSTLSYKEAVKAIEQIESPTVGFAKPGEYQGPTSGNSAIIKQNNTQIQLLVQ-TLK 295
           Y  T+ T +YK A+ A E I SP++GF  P EY G  +G  A+IKQNN  IQL+V+ ++ 
Sbjct: 3   YQATEKTPTYKRALAATEPINSPSLGFVNPEEYSGGMTGTKALIKQNNLLIQLVVELSVN 62

Query: 296 VSGISRQTSRLS 331
           V+ +S Q  +L+
Sbjct: 63  VNSLSEQVDQLA 74


>gb|ACB87155.1| unknown [Citrus yellow mosaic virus]
          Length = 137

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 32/72 (44%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
 Frame = +2

Query: 119 YTITKSTLSYKEAVKAIEQIESPTVGFAKPGEYQGPTSGNSAIIKQNNTQIQLLVQ-TLK 295
           Y  T+ T +YK A+ A E I SP++GF  P EY G  +G  A+IKQNN  IQL+V+ ++ 
Sbjct: 3   YQATEKTPTYKRALAATEPINSPSLGFVNPEEYSGGITGTKALIKQNNLLIQLVVELSVN 62

Query: 296 VSGISRQTSRLS 331
           V+ +S Q  +L+
Sbjct: 63  VNNLSEQVDQLA 74


>ref|YP_009002584.1| hypothetical protein [Hibiscus bacilliform virus GD1]
           gi|584388572|gb|AHI90953.1| hypothetical protein
           [Hibiscus bacilliform virus GD1]
          Length = 135

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 32/55 (58%), Positives = 40/55 (72%)
 Frame = +2

Query: 116 NYTITKSTLSYKEAVKAIEQIESPTVGFAKPGEYQGPTSGNSAIIKQNNTQIQLL 280
           +++ T++T SYKEAV A E I+ P VGFAKP +  G  S +S IIKQNNT IQLL
Sbjct: 2   SHSRTRATASYKEAVAATEDIQPPAVGFAKPSDNVGAQSSSSVIIKQNNTIIQLL 56


>gb|ACB87149.1| unknown [Citrus yellow mosaic virus]
          Length = 137

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 31/72 (43%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
 Frame = +2

Query: 119 YTITKSTLSYKEAVKAIEQIESPTVGFAKPGEYQGPTSGNSAIIKQNNTQIQLLVQ-TLK 295
           Y  T+ T +YK A+ A E I SP++GF  P EY G  +G  A+IKQNN  IQL+V+ ++ 
Sbjct: 3   YQATEKTPTYKRALAATEPINSPSLGFVNPEEYSGGITGTKALIKQNNLLIQLVVELSVN 62

Query: 296 VSGISRQTSRLS 331
           ++ +S Q  +L+
Sbjct: 63  INSLSEQVDQLA 74


>gb|ACO55657.1| unknown [Citrus yellow mosaic virus]
          Length = 137

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 31/72 (43%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
 Frame = +2

Query: 119 YTITKSTLSYKEAVKAIEQIESPTVGFAKPGEYQGPTSGNSAIIKQNNTQIQLLVQ-TLK 295
           Y  T+ T +YK A++A E I SP +GF  P +Y G  +G  A+IKQNN  IQL+V+ ++ 
Sbjct: 3   YQNTEKTPTYKRALEATEPINSPALGFINPEDYSGGITGTKALIKQNNLLIQLVVELSVN 62

Query: 296 VSGISRQTSRLS 331
           V+ +S Q ++L+
Sbjct: 63  VNSLSEQVAQLT 74


>ref|NP_569152.1| hypothetical protein CYMVgp2 [Citrus yellow mosaic virus]
           gi|16416938|gb|AAL18494.1|AF347695_2 unknown [citrus
           yellow mosaic virus]
          Length = 137

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 31/72 (43%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
 Frame = +2

Query: 119 YTITKSTLSYKEAVKAIEQIESPTVGFAKPGEYQGPTSGNSAIIKQNNTQIQLLVQ-TLK 295
           Y  T+ T +YK A++A E I SP +GF  P +Y G  +G  A+IKQNN  IQL+V+ ++ 
Sbjct: 3   YQNTEKTPTYKRALEATEPINSPALGFINPEDYSGGITGTKALIKQNNLLIQLVVELSVN 62

Query: 296 VSGISRQTSRLS 331
           V+ +S Q ++L+
Sbjct: 63  VNSLSEQVAQLT 74


>ref|YP_009002583.1| hypothetical protein [Hibiscus bacilliform virus GD1]
           gi|584388571|gb|AHI90952.1| hypothetical protein
           [Hibiscus bacilliform virus GD1]
          Length = 143

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 26/32 (81%), Positives = 29/32 (90%)
 Frame = +3

Query: 3   PKLVEREALRLTEDLNKKIKRVAKLLHKLEQW 98
           PKLVE +AL+LTEDLNKK+ RV KLLHKLEQW
Sbjct: 109 PKLVEAQALQLTEDLNKKLTRVEKLLHKLEQW 140