BLASTX nr result

ID: Zingiber24_contig00047887 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00047887
         (334 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002446050.1| hypothetical protein SORBIDRAFT_06g000990 [S...    57   3e-06
gb|EAZ29494.1| hypothetical protein OsJ_13570 [Oryza sativa Japo...    55   7e-06
gb|EAY92823.1| hypothetical protein OsI_14626 [Oryza sativa Indi...    55   7e-06

>ref|XP_002446050.1| hypothetical protein SORBIDRAFT_06g000990 [Sorghum bicolor]
           gi|241937233|gb|EES10378.1| hypothetical protein
           SORBIDRAFT_06g000990 [Sorghum bicolor]
          Length = 123

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 15/102 (14%)
 Frame = -1

Query: 334 AAATTTTSSPDWSQKLLAGFRRMLGGLMAVSXXXXXXXXASIQ---------------AV 200
           ++++++ ++  W  +L+ GFRRML GL +          +S+                  
Sbjct: 19  SSSSSSRAARRWPTRLVDGFRRMLVGLFSFPPRPPKVTFSSVDDHRAGGAGVAGGGGGGG 78

Query: 199 PEAPKTSCSYYNLYPLDAHYEEAITDCIEFLNKSSNCGRRGR 74
             + ++S S  NL+PL+AHY+EAI DC+EF NKS+    R R
Sbjct: 79  DASKRSSWSSSNLHPLNAHYDEAIADCVEFFNKSARVDLRSR 120


>gb|EAZ29494.1| hypothetical protein OsJ_13570 [Oryza sativa Japonica Group]
          Length = 99

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 31/81 (38%), Positives = 43/81 (53%), Gaps = 12/81 (14%)
 Frame = -1

Query: 301 WSQKLLAGFRRMLGGLMAVSXXXXXXXXASIQAVP------------EAPKTSCSYYNLY 158
           W  +++ GFR+ML GL +          +S                 +APK SCS  NL+
Sbjct: 3   WPSRIMDGFRKMLVGLFSFPPRPPTVTFSSSSVDDNHHHHHRGGGGGDAPKRSCSS-NLH 61

Query: 157 PLDAHYEEAITDCIEFLNKSS 95
           PL+ HY+EAI DC+EF NKS+
Sbjct: 62  PLNPHYDEAIADCVEFFNKSA 82


>gb|EAY92823.1| hypothetical protein OsI_14626 [Oryza sativa Indica Group]
          Length = 99

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 31/81 (38%), Positives = 43/81 (53%), Gaps = 12/81 (14%)
 Frame = -1

Query: 301 WSQKLLAGFRRMLGGLMAVSXXXXXXXXASIQAVP------------EAPKTSCSYYNLY 158
           W  +++ GFR+ML GL +          +S                 +APK SCS  NL+
Sbjct: 3   WPSRIMDGFRKMLVGLFSFPPRPPTVTFSSSSVDDNHHHHHRGGGGGDAPKRSCSS-NLH 61

Query: 157 PLDAHYEEAITDCIEFLNKSS 95
           PL+ HY+EAI DC+EF NKS+
Sbjct: 62  PLNPHYDEAIADCVEFFNKSA 82


Top