BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00047873
         (392 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006651531.1| PREDICTED: putative pentatricopeptide repeat...    78   1e-12
gb|EXC24858.1| hypothetical protein L484_013224 [Morus notabilis]      77   3e-12
gb|EEE59331.1| hypothetical protein OsJ_11408 [Oryza sativa Japo...    75   7e-12
gb|EAY90606.1| hypothetical protein OsI_12205 [Oryza sativa Indi...    75   7e-12
ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group] g...    75   7e-12
gb|AAL93067.1|AC093180_14 hypothetical protein [Oryza sativa Jap...    75   7e-12
ref|XP_001773953.1| predicted protein [Physcomitrella patens] gi...    74   2e-11
ref|XP_004234765.1| PREDICTED: putative pentatricopeptide repeat...    74   2e-11
gb|EMJ02994.1| hypothetical protein PRUPE_ppa003245mg [Prunus pe...    74   3e-11
ref|XP_004512569.1| PREDICTED: pentatricopeptide repeat-containi...    72   8e-11
ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago t...    72   1e-10
ref|XP_002966540.1| hypothetical protein SELMODRAFT_61257 [Selag...    72   1e-10
ref|XP_002982380.1| hypothetical protein SELMODRAFT_447 [Selagin...    72   1e-10
ref|XP_006363843.1| PREDICTED: putative pentatricopeptide repeat...    71   1e-10
dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]                       71   1e-10
ref|XP_002869013.1| pentatricopeptide repeat-containing protein ...    71   1e-10
ref|NP_201360.1| pentatricopeptide repeat-containing protein [Ar...    71   2e-10
gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygr...    71   2e-10
ref|XP_002977535.1| hypothetical protein SELMODRAFT_106750 [Sela...    71   2e-10
gb|ABR16520.1| unknown [Picea sitchensis]                              71   2e-10

>ref|XP_006651531.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Oryza brachyantha]
          Length = 815

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 41/90 (45%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
 Frame = -2

Query: 268 YAALLRRCASERSLQDAHRIHCHMTMSGIP-PLSLGNKLIDVYLKCGAIHDARQVFDEVP 92
           Y+++LR CAS  S++ A +IHC +  S       +GN LID Y KCG + DAR VF    
Sbjct: 446 YSSVLRACASTASIKHAGQIHCLIEKSTFNNDTVIGNSLIDAYAKCGYMRDARMVFQN-- 503

Query: 91  MIEEADVPTWNAVISAYAFHGSFLDCFLLF 2
            ++E DV +WNA+IS YA HG   D   LF
Sbjct: 504 -LKECDVVSWNAIISGYALHGQATDALELF 532


>gb|EXC24858.1| hypothetical protein L484_013224 [Morus notabilis]
          Length = 742

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 42/110 (38%), Positives = 63/110 (57%), Gaps = 1/110 (0%)
 Frame = -2

Query: 328 KATFSTLVRAQRDTAITFDNYAALLRRCASERSLQDAHRIHCHMTMSG-IPPLSLGNKLI 152
           K     L R +R +A+    Y+ +L  C  ER+L++   +H H   SG +P L + N+ I
Sbjct: 74  KEAVQLLNRIERPSALI---YSTILCHCLHERALEEGKLVHAHTKASGLVPGLFISNRFI 130

Query: 151 DVYLKCGAIHDARQVFDEVPMIEEADVPTWNAVISAYAFHGSFLDCFLLF 2
           D+Y KCG + DAR+VFDE+P   + D+ +WN +IS YA  G   +   LF
Sbjct: 131 DLYAKCGCLGDARKVFDEMP---DKDLCSWNTMISGYAKVGKLDEARRLF 177


>gb|EEE59331.1| hypothetical protein OsJ_11408 [Oryza sativa Japonica Group]
          Length = 691

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 40/90 (44%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
 Frame = -2

Query: 268 YAALLRRCASERSLQDAHRIHCHMTMSGIP-PLSLGNKLIDVYLKCGAIHDARQVFDEVP 92
           Y+++LR CAS  S++ A +IHC +  S       +GN LID Y KCG I DA +VF    
Sbjct: 468 YSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQH-- 525

Query: 91  MIEEADVPTWNAVISAYAFHGSFLDCFLLF 2
            + E D+ +WNA+IS YA HG   D   LF
Sbjct: 526 -LMERDIISWNAIISGYALHGQAADALELF 554


>gb|EAY90606.1| hypothetical protein OsI_12205 [Oryza sativa Indica Group]
          Length = 818

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 40/90 (44%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
 Frame = -2

Query: 268 YAALLRRCASERSLQDAHRIHCHMTMSGIP-PLSLGNKLIDVYLKCGAIHDARQVFDEVP 92
           Y+++LR CAS  S++ A +IHC +  S       +GN LID Y KCG I DA +VF    
Sbjct: 449 YSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQH-- 506

Query: 91  MIEEADVPTWNAVISAYAFHGSFLDCFLLF 2
            + E D+ +WNA+IS YA HG   D   LF
Sbjct: 507 -LMERDIISWNAIISGYALHGQAADALELF 535


>ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
           gi|108709057|gb|ABF96852.1| pentatricopeptide, putative,
           expressed [Oryza sativa Japonica Group]
           gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa
           Japonica Group] gi|215767379|dbj|BAG99607.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 837

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 40/90 (44%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
 Frame = -2

Query: 268 YAALLRRCASERSLQDAHRIHCHMTMSGIP-PLSLGNKLIDVYLKCGAIHDARQVFDEVP 92
           Y+++LR CAS  S++ A +IHC +  S       +GN LID Y KCG I DA +VF    
Sbjct: 468 YSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQH-- 525

Query: 91  MIEEADVPTWNAVISAYAFHGSFLDCFLLF 2
            + E D+ +WNA+IS YA HG   D   LF
Sbjct: 526 -LMERDIISWNAIISGYALHGQAADALELF 554


>gb|AAL93067.1|AC093180_14 hypothetical protein [Oryza sativa Japonica Group]
          Length = 1012

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 40/90 (44%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
 Frame = -2

Query: 268 YAALLRRCASERSLQDAHRIHCHMTMSGIP-PLSLGNKLIDVYLKCGAIHDARQVFDEVP 92
           Y+++LR CAS  S++ A +IHC +  S       +GN LID Y KCG I DA +VF    
Sbjct: 468 YSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQH-- 525

Query: 91  MIEEADVPTWNAVISAYAFHGSFLDCFLLF 2
            + E D+ +WNA+IS YA HG   D   LF
Sbjct: 526 -LMERDIISWNAIISGYALHGQAADALELF 554


>ref|XP_001773953.1| predicted protein [Physcomitrella patens]
           gi|162674797|gb|EDQ61301.1| predicted protein
           [Physcomitrella patens]
          Length = 905

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 42/99 (42%), Positives = 57/99 (57%), Gaps = 1/99 (1%)
 Frame = -2

Query: 295 RDTAITFDNYAALLRRCASERSLQDAHRIHCHMTMSGI-PPLSLGNKLIDVYLKCGAIHD 119
           R T      Y ALL+ C  +R L +A RIH  M  +G+ P + L N LI++Y+KC ++ D
Sbjct: 21  RPTETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLD 80

Query: 118 ARQVFDEVPMIEEADVPTWNAVISAYAFHGSFLDCFLLF 2
           A QVF E+P     DV +WN++IS YA  G     F LF
Sbjct: 81  AHQVFKEMP---RRDVISWNSLISCYAQQGFKKKAFQLF 116



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 31/90 (34%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
 Frame = -2

Query: 268 YAALLRRCASERSLQDAHRIHCHMTMSGIP-PLSLGNKLIDVYLKCGAIHDARQVFDEVP 92
           +A++L  C +  +L+   +IH  +T SG+   ++LGN LI++Y++CG++ DAR VF    
Sbjct: 535 FASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHS-- 592

Query: 91  MIEEADVPTWNAVISAYAFHGSFLDCFLLF 2
            ++  DV +W A+I   A  G  +    LF
Sbjct: 593 -LQHRDVMSWTAMIGGCADQGEDMKAIELF 621



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
 Frame = -2

Query: 319 FSTLVRAQRD-TAITFDNYAALLRRCASERSLQDAHRIHCHMTMSG-IPPLSLGNKLIDV 146
           F    R + D  A+    Y ++L  C++ ++L+    IH H++  G    + +GN LI +
Sbjct: 315 FEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISM 374

Query: 145 YLKCGAIHDARQVFDEVPMIEEADVPTWNAVISAYA 38
           Y +CG +  AR++F  +P   + D+ +WNA+I+ YA
Sbjct: 375 YARCGDLPKARELFYTMP---KRDLISWNAIIAGYA 407


>ref|XP_004234765.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Solanum lycopersicum]
          Length = 499

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 37/101 (36%), Positives = 59/101 (58%), Gaps = 1/101 (0%)
 Frame = -2

Query: 301 AQRDTAITFDNYAALLRRCASERSLQDAHRIHCHMTMSGI-PPLSLGNKLIDVYLKCGAI 125
           A++   + F  Y  +L  C ++R++++  R+H HM  S   PP+ L  +LI  Y+KCG +
Sbjct: 29  AKQGLQVKFKEYDTVLNECINQRAIREGQRVHAHMIKSHYQPPVYLRTRLIVFYIKCGLL 88

Query: 124 HDARQVFDEVPMIEEADVPTWNAVISAYAFHGSFLDCFLLF 2
            DAR VFDE+P   + +V +W A+IS Y+  G   +   LF
Sbjct: 89  GDARWVFDEMP---QRNVVSWTALISGYSQTGDISEAIHLF 126



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
 Frame = -2

Query: 268 YAALLRRCASERSLQDAHRIHCHMTMSGIPP-LSLGNKLIDVYLKCGAIHDARQVFDEVP 92
           +A +L  C S    Q   +IHC +  S     + +G+ L+D+Y K G +H+AR +F+ +P
Sbjct: 141 FATVLTSCTSAIGFQFGRQIHCLLVKSPFESHVYVGSSLLDMYAKAGKVHEARYIFENLP 200

Query: 91  MIEEADVPTWNAVISAYAFHGSFLDCFLLF 2
              E DV +  A+IS YA  G + +   LF
Sbjct: 201 ---ERDVVSCTAIISGYAQQGLYEEALDLF 227


>gb|EMJ02994.1| hypothetical protein PRUPE_ppa003245mg [Prunus persica]
          Length = 589

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 36/93 (38%), Positives = 60/93 (64%), Gaps = 1/93 (1%)
 Frame = -2

Query: 277 FDNYAALLRRCASERSLQDAHRIHCHM-TMSGIPPLSLGNKLIDVYLKCGAIHDARQVFD 101
           F  YA L + C+S  ++ +  ++  H+ T S +PP+ L N+ I+ Y KCG++ DAR++F+
Sbjct: 60  FSLYARLFQLCSSNHAILEVRKVESHLVTFSPVPPIFLLNRAIEAYAKCGSLGDARELFE 119

Query: 100 EVPMIEEADVPTWNAVISAYAFHGSFLDCFLLF 2
           E+P   + D  +WNA+I+AY+  G+  D F LF
Sbjct: 120 EMP---QRDGGSWNALITAYSQTGNPEDAFGLF 149


>ref|XP_004512569.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65570-like [Cicer arietinum]
          Length = 677

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 36/89 (40%), Positives = 51/89 (57%)
 Frame = -2

Query: 268 YAALLRRCASERSLQDAHRIHCHMTMSGIPPLSLGNKLIDVYLKCGAIHDARQVFDEVPM 89
           Y +L+  CA  +S      IH H+  SG     LG+KLID Y+KCG I  AR++FDE+P 
Sbjct: 4   YTSLIAHCAHTKSFTTLKAIHSHIIKSGFLFSLLGHKLIDGYIKCGIITKARKLFDELP- 62

Query: 88  IEEADVPTWNAVISAYAFHGSFLDCFLLF 2
                + TWN++IS+Y  HG   +   L+
Sbjct: 63  --NRHIITWNSIISSYVSHGKTKEAIKLY 89


>ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355479421|gb|AES60624.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 840

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 9/117 (7%)
 Frame = -2

Query: 325 ATFSTLVRAQRDTA--------ITFDNYAALLRRCASERSLQDAHRIHCHMTMSG-IPPL 173
           +TF+T +  Q+           + F+NY A+L  C ++R+ ++  R+H HM  +  +P +
Sbjct: 219 STFTTHIHLQQPLLQMALHGFNMKFENYNAILNECVNKRAFREGQRVHAHMIKTRYLPSV 278

Query: 172 SLGNKLIDVYLKCGAIHDARQVFDEVPMIEEADVPTWNAVISAYAFHGSFLDCFLLF 2
            L  +LI +Y KC ++ DA  VFDE+P   E +V +W A+ISAY+  G       LF
Sbjct: 279 FLRTRLIVLYTKCDSLGDAHNVFDEMP---ERNVVSWTAMISAYSQRGYASQALNLF 332


>ref|XP_002966540.1| hypothetical protein SELMODRAFT_61257 [Selaginella moellendorffii]
           gi|300165960|gb|EFJ32567.1| hypothetical protein
           SELMODRAFT_61257 [Selaginella moellendorffii]
          Length = 630

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 40/94 (42%), Positives = 57/94 (60%), Gaps = 5/94 (5%)
 Frame = -2

Query: 268 YAALLRRCASERSLQDAHRIHCHMTMSG--IPPLSLGNKLIDVYLKCG---AIHDARQVF 104
           YA+LLRRC   RSL D  R+H H+  +G  +  + LGN LI +Y KCG   ++ DAR VF
Sbjct: 1   YASLLRRCGISRSLADGRRVHDHILATGHFLRSVHLGNLLIQMYRKCGGTSSLADARAVF 60

Query: 103 DEVPMIEEADVPTWNAVISAYAFHGSFLDCFLLF 2
           D++P   + DV +W+ +I+AY   G   +   LF
Sbjct: 61  DQMP---KKDVVSWSCIIAAYGQAGHCREAINLF 91



 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 28/85 (32%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
 Frame = -2

Query: 271 NYAALLRRCASERSLQDAHRIHCHMTMSGI---PPLSLGNKLIDVYLKCGAIHDARQVFD 101
           ++  +L  C+S R L+   RIH  + ++ +   P LS+ N L+  Y KCG +  A ++F 
Sbjct: 304 SFLGVLSACSSTRCLRSCKRIHSQLELAAVHSPPDLSVENSLVTAYAKCGDLEAAERIFQ 363

Query: 100 EVPMIEEADVPTWNAVISAYAFHGS 26
            +P     +V +W A+++AY FHG+
Sbjct: 364 RIP---GKNVVSWTAMLTAYTFHGN 385


>ref|XP_002982380.1| hypothetical protein SELMODRAFT_447 [Selaginella moellendorffii]
           gi|300149972|gb|EFJ16625.1| hypothetical protein
           SELMODRAFT_447 [Selaginella moellendorffii]
          Length = 730

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 40/94 (42%), Positives = 57/94 (60%), Gaps = 5/94 (5%)
 Frame = -2

Query: 268 YAALLRRCASERSLQDAHRIHCHMTMSG--IPPLSLGNKLIDVYLKCG---AIHDARQVF 104
           YA+LLRRC   RSL D  R+H H+  +G  +  + LGN LI +Y KCG   ++ DAR VF
Sbjct: 1   YASLLRRCGISRSLADGRRVHDHILATGHFLRSVHLGNLLIQMYRKCGGTSSLADARAVF 60

Query: 103 DEVPMIEEADVPTWNAVISAYAFHGSFLDCFLLF 2
           D++P   + DV +W+ +I+AY   G   +   LF
Sbjct: 61  DQMP---KKDVVSWSCIIAAYGQAGHCREAINLF 91



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 3/85 (3%)
 Frame = -2

Query: 271 NYAALLRRCASERSLQDAHRIHCHMTMSGI---PPLSLGNKLIDVYLKCGAIHDARQVFD 101
           ++  +L  C+S   L+   RIH  + ++ +   P LS+ N L+  Y KCG +  A ++F 
Sbjct: 304 SFLGVLSACSSTGCLRSCKRIHSQLELAAVHSPPDLSVENSLVTAYAKCGDLEAAERIFQ 363

Query: 100 EVPMIEEADVPTWNAVISAYAFHGS 26
            +P     +V +W A+++AY FHG+
Sbjct: 364 RIP---GKNVVSWTAMLTAYTFHGN 385


>ref|XP_006363843.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Solanum tuberosum]
          Length = 537

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 36/101 (35%), Positives = 59/101 (58%), Gaps = 1/101 (0%)
 Frame = -2

Query: 301 AQRDTAITFDNYAALLRRCASERSLQDAHRIHCHMTMSGI-PPLSLGNKLIDVYLKCGAI 125
           A++   + F  Y  LL  C ++R++++  R+H +M  +   PP+ L  +LI  Y+KCG +
Sbjct: 53  AKQGLQVKFKEYDTLLNECINQRAIREGQRVHANMIKTHYQPPVYLRTRLIVFYIKCGLL 112

Query: 124 HDARQVFDEVPMIEEADVPTWNAVISAYAFHGSFLDCFLLF 2
            DAR VFDE+P   + +V +W A+IS Y+  G   +   LF
Sbjct: 113 GDARWVFDEMP---QRNVVSWTALISGYSQKGHISEAIHLF 150



 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
 Frame = -2

Query: 268 YAALLRRCASERSLQDAHRIHCHMTMSGIPP-LSLGNKLIDVYLKCGAIHDARQVFDEVP 92
           +A +L  C S    Q   +IHC +  S     + +G+ L+D+Y K G +H+AR VF+ +P
Sbjct: 165 FATVLTLCTSAIGFQFGRQIHCLLVKSPFESHVYVGSSLLDMYAKAGKVHEARYVFENLP 224

Query: 91  MIEEADVPTWNAVISAYAFHGSFLDCFLLF 2
              E DV +  A+IS Y+  G F +    F
Sbjct: 225 ---ERDVVSCTAIISGYSQQGLFEEALEFF 251


>dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
          Length = 1106

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 41/99 (41%), Positives = 56/99 (56%), Gaps = 1/99 (1%)
 Frame = -2

Query: 295 RDTAITFDNYAALLRRCASERSLQDAHRIHCHMTMSGI-PPLSLGNKLIDVYLKCGAIHD 119
           R T      Y ALL+ C  +R L +A RIH  M  + + P + L N LI++Y+KC ++ D
Sbjct: 21  RPTETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLD 80

Query: 118 ARQVFDEVPMIEEADVPTWNAVISAYAFHGSFLDCFLLF 2
           A QVF E+P     DV +WN++IS YA  G     F LF
Sbjct: 81  AHQVFKEMP---RRDVISWNSLISCYAQQGFKKKAFQLF 116



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 31/82 (37%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
 Frame = -2

Query: 271 NYAALLRRCASERSLQDAHRIHCHMTMSGIP-PLSLGNKLIDVYLKCGAIHDARQVFDEV 95
           ++ +LL  C+S  +L++  R+H  +    +   + +G  LI +Y KCG+  +A++VFD  
Sbjct: 736 SFVSLLNACSSFSALEEGKRVHAEIVKRKLQGDVRVGAALISMYAKCGSQGEAQEVFDN- 794

Query: 94  PMIEEADVPTWNAVISAYAFHG 29
             I E +V TWNA+I+AYA HG
Sbjct: 795 --IIEKNVVTWNAMINAYAQHG 814



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 31/90 (34%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
 Frame = -2

Query: 268 YAALLRRCASERSLQDAHRIHCHMTMSGIP-PLSLGNKLIDVYLKCGAIHDARQVFDEVP 92
           +A++L  C +  +L+   +IH  +T SG+   ++LGN LI++Y++CG++ DAR VF    
Sbjct: 535 FASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHS-- 592

Query: 91  MIEEADVPTWNAVISAYAFHGSFLDCFLLF 2
            ++  DV +W A+I   A  G  +    LF
Sbjct: 593 -LQHRDVMSWTAMIGGCADQGEDMKAIELF 621



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
 Frame = -2

Query: 319 FSTLVRAQRD-TAITFDNYAALLRRCASERSLQDAHRIHCHMTMSG-IPPLSLGNKLIDV 146
           F    R + D  A+    Y ++L  C++ ++L+    IH H++  G    + +GN LI +
Sbjct: 315 FEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISM 374

Query: 145 YLKCGAIHDARQVFDEVPMIEEADVPTWNAVISAYA 38
           Y +CG +  AR++F  +P   + D+ +WNA+I+ YA
Sbjct: 375 YARCGDLPKARELFYTMP---KRDLISWNAIIAGYA 407



 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 27/81 (33%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
 Frame = -2

Query: 268 YAALLRRCASERSLQDAHRIHCHMTMSGIP-PLSLGNKLIDVYLKCGAIHDARQVFDEVP 92
           ++++L+ C S   L +  ++  ++  SG      +GN LI  Y K G++ DAR+VFD++P
Sbjct: 636 FSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNALISAYSKSGSMTDAREVFDKMP 695

Query: 91  MIEEADVPTWNAVISAYAFHG 29
                D+ +WN +I+ YA +G
Sbjct: 696 ---SRDIVSWNKIIAGYAQNG 713


>ref|XP_002869013.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297314849|gb|EFH45272.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 693

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 38/104 (36%), Positives = 66/104 (63%), Gaps = 1/104 (0%)
 Frame = -2

Query: 310 LVRAQRDTAITFDNYAALLRRCASERSLQDAHRIHCHMTMSG-IPPLSLGNKLIDVYLKC 134
           L RA++  A T+ N   L++ C+  R+L++  ++H H+  SG +P + + N+++ +Y KC
Sbjct: 79  LGRAKKPPASTYCN---LIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRILGMYAKC 135

Query: 133 GAIHDARQVFDEVPMIEEADVPTWNAVISAYAFHGSFLDCFLLF 2
           G++ DAR+VFDE+P   E DV +WN +++ YA  G   +   LF
Sbjct: 136 GSLVDARKVFDEMP---ERDVCSWNVMVNGYAEVGLLEEARNLF 176


>ref|NP_201360.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75180382|sp|Q9LSL8.1|PP446_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g65570 gi|8978285|dbj|BAA98176.1| unnamed protein
           product [Arabidopsis thaliana]
           gi|332010689|gb|AED98072.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 738

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 38/87 (43%), Positives = 49/87 (56%)
 Frame = -2

Query: 292 DTAITFDNYAALLRRCASERSLQDAHRIHCHMTMSGIPPLSLGNKLIDVYLKCGAIHDAR 113
           DT  T  N++ LLR+C  ERS+     I  HM  SG P    G+KL+D  LKCG I  AR
Sbjct: 60  DTLTTTHNFSQLLRQCIDERSISGIKTIQAHMLKSGFPAEISGSKLVDASLKCGDIDYAR 119

Query: 112 QVFDEVPMIEEADVPTWNAVISAYAFH 32
           QVFD    + E  + TWN++I+    H
Sbjct: 120 QVFDG---MSERHIVTWNSLIAYLIKH 143


>gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
          Length = 1161

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 38/90 (42%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
 Frame = -2

Query: 268 YAALLRRCASERSLQDAHRIHCHMTMSGI-PPLSLGNKLIDVYLKCGAIHDARQVFDEVP 92
           Y  L++ C  +RSL +A RIH  M  +G+ P + L N LI++Y+KC ++ DA QVF ++P
Sbjct: 85  YVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKMP 144

Query: 91  MIEEADVPTWNAVISAYAFHGSFLDCFLLF 2
                DV +WN++IS YA  G     F LF
Sbjct: 145 ---RRDVISWNSLISCYAQQGFKKKAFQLF 171



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
 Frame = -2

Query: 271  NYAALLRRCASERSLQDAHRIHCHMTMSGIP-PLSLGNKLIDVYLKCGAIHDARQVFDEV 95
            ++ ++L  C+S  +L++  R+H  +    +   + +G  LI +Y KCG++ +A++VFD  
Sbjct: 791  SFVSILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGAALISMYAKCGSLEEAQEVFDN- 849

Query: 94   PMIEEADVPTWNAVISAYAFHG 29
                E +V TWNA+I+AYA HG
Sbjct: 850  --FTEKNVVTWNAMINAYAQHG 869



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 28/81 (34%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
 Frame = -2

Query: 268 YAALLRRCASERSLQDAHRIHCHMTMSGIP-PLSLGNKLIDVYLKCGAIHDARQVFDEVP 92
           ++++L+ C S   L +  ++  H+  SG      +GN LI  Y K G++ DAR+VFD++P
Sbjct: 691 FSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGNALISAYSKSGSMTDARKVFDKMP 750

Query: 91  MIEEADVPTWNAVISAYAFHG 29
                D+ +WN +I+ YA +G
Sbjct: 751 ---NRDIMSWNKMIAGYAQNG 768


>ref|XP_002977535.1| hypothetical protein SELMODRAFT_106750 [Selaginella moellendorffii]
           gi|300154905|gb|EFJ21539.1| hypothetical protein
           SELMODRAFT_106750 [Selaginella moellendorffii]
          Length = 545

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 35/90 (38%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
 Frame = -2

Query: 268 YAALLRRCASERSLQDAHRIHCHMTMSGIP-PLSLGNKLIDVYLKCGAIHDARQVFDEVP 92
           + A+L   +  R L++  +IH  +  SG    LS+GN LID+Y KCG++ DAR+ F  + 
Sbjct: 115 FLAILSAVSGARGLEEGRKIHTQVVESGYSGELSVGNALIDMYSKCGSLEDARKTFAGMD 174

Query: 91  MIEEADVPTWNAVISAYAFHGSFLDCFLLF 2
              + D+  W A+I+AYA HG + + F LF
Sbjct: 175 EKNKPDLVLWTAMIAAYAGHGDYKEAFELF 204


>gb|ABR16520.1| unknown [Picea sitchensis]
          Length = 644

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 36/81 (44%), Positives = 55/81 (67%), Gaps = 2/81 (2%)
 Frame = -2

Query: 268 YAALLRRCASERSLQDAHRIHCHM--TMSGIPPLSLGNKLIDVYLKCGAIHDARQVFDEV 95
           Y +LL+ C + +SL DA  +H HM  T      +SLGNKL+ +Y+K G++ +AR+VFDE+
Sbjct: 67  YDSLLQGCLNAKSLPDAKLLHAHMIQTQFECQDISLGNKLVSIYVKLGSLVEARRVFDEM 126

Query: 94  PMIEEADVPTWNAVISAYAFH 32
           P+    +V +W A+I+AYA H
Sbjct: 127 PV---KNVVSWTAMIAAYARH 144