BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00047830
         (508 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004973211.1| PREDICTED: ribonuclease E/G-like protein, ch...    61   2e-07
ref|XP_003573703.1| PREDICTED: uncharacterized protein LOC100832...    59   7e-07
ref|XP_006659300.1| PREDICTED: ribonuclease E/G-like protein, ch...    57   2e-06
ref|XP_006469419.1| PREDICTED: ribonuclease E/G-like protein, ch...    57   3e-06
dbj|BAD33523.1| putative endoribonuclease E [Oryza sativa Japoni...    56   6e-06
ref|NP_001061542.1| Os08g0323600 [Oryza sativa Japonica Group] g...    56   6e-06
gb|EEC83368.1| hypothetical protein OsI_28778 [Oryza sativa Indi...    56   6e-06

>ref|XP_004973211.1| PREDICTED: ribonuclease E/G-like protein, chloroplastic-like
           [Setaria italica]
          Length = 1072

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 32/78 (41%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
 Frame = -1

Query: 232 RPPLITWRWIQQQNDLKVNFRAS-NLSASTLMPTIDDIGYSAIACRGVRKVVWNIEADVT 56
           RP L +   +Q  + L+ N +A  NL+ S      +    S I C+G   + WN++ADV 
Sbjct: 55  RPSLCS---VQFMDGLRSNIQAEVNLALSPKASMSNGSDDSTITCKGFCTIAWNLKADVQ 111

Query: 55  NGYLLFITGDPICLGSWE 2
           +GYL+FITGDP+ LG WE
Sbjct: 112 DGYLIFITGDPVTLGCWE 129


>ref|XP_003573703.1| PREDICTED: uncharacterized protein LOC100832256 [Brachypodium
           distachyon]
          Length = 1086

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 26/65 (40%), Positives = 42/65 (64%)
 Frame = -1

Query: 196 QNDLKVNFRASNLSASTLMPTIDDIGYSAIACRGVRKVVWNIEADVTNGYLLFITGDPIC 17
           + +L+V   +S+   + +    DD   SAI C+G   + WN++ADV +GY++F+TGDP+ 
Sbjct: 68  RGNLQVEANSSHAPTALMSTGRDD---SAITCKGFCMISWNLKADVPDGYVIFVTGDPVT 124

Query: 16  LGSWE 2
           LG WE
Sbjct: 125 LGCWE 129


>ref|XP_006659300.1| PREDICTED: ribonuclease E/G-like protein, chloroplastic-like [Oryza
           brachyantha]
          Length = 1078

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 26/52 (50%), Positives = 35/52 (67%)
 Frame = -1

Query: 157 SASTLMPTIDDIGYSAIACRGVRKVVWNIEADVTNGYLLFITGDPICLGSWE 2
           S   LM T  D   SAI C+G   + WN++ADV +GY++F+TGDP+ LG WE
Sbjct: 77  SPKPLMSTRHDD--SAITCKGFCTISWNLKADVLDGYIIFVTGDPVTLGCWE 126


>ref|XP_006469419.1| PREDICTED: ribonuclease E/G-like protein, chloroplastic-like
           isoform X1 [Citrus sinensis]
          Length = 1009

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 39/101 (38%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
 Frame = -1

Query: 301 HLLPSGSRRAVDFFYHSGSPRNFRPPLITWRWIQQQNDLKVNFRASNLSASTLMPTID-D 125
           H L SG  R+  +F   GS   F  P I+ R I  +N  +  FR  N ++    P +  +
Sbjct: 18  HCLLSG--RSPTWFL--GSFNRFLSPYIS-RQIPHRNMFRFAFRIRNRNSLIKSPIMSAN 72

Query: 124 IGYSAIACRGVRKVVWNIEADVTNGYLLFITGDPICLGSWE 2
            G SA A +G+ ++VW +EAD+  G LL+ITGDP  LG W+
Sbjct: 73  RGKSASAIQGLCEIVWTVEADLEAGQLLYITGDPSVLGCWD 113


>dbj|BAD33523.1| putative endoribonuclease E [Oryza sativa Japonica Group]
          Length = 898

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 20/38 (52%), Positives = 30/38 (78%)
 Frame = -1

Query: 115 SAIACRGVRKVVWNIEADVTNGYLLFITGDPICLGSWE 2
           SAI C+G   + WN+++DV +GY++F+TGDP+ LG WE
Sbjct: 94  SAITCKGFCTISWNLKSDVLDGYIIFVTGDPVTLGCWE 131


>ref|NP_001061542.1| Os08g0323600 [Oryza sativa Japonica Group]
           gi|38637407|dbj|BAD03665.1| putative endoribonuclease E
           [Oryza sativa Japonica Group]
           gi|113623511|dbj|BAF23456.1| Os08g0323600 [Oryza sativa
           Japonica Group] gi|222640346|gb|EEE68478.1| hypothetical
           protein OsJ_26881 [Oryza sativa Japonica Group]
          Length = 1085

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 20/38 (52%), Positives = 30/38 (78%)
 Frame = -1

Query: 115 SAIACRGVRKVVWNIEADVTNGYLLFITGDPICLGSWE 2
           SAI C+G   + WN+++DV +GY++F+TGDP+ LG WE
Sbjct: 94  SAITCKGFCTISWNLKSDVLDGYIIFVTGDPVTLGCWE 131


>gb|EEC83368.1| hypothetical protein OsI_28778 [Oryza sativa Indica Group]
          Length = 1036

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 20/38 (52%), Positives = 30/38 (78%)
 Frame = -1

Query: 115 SAIACRGVRKVVWNIEADVTNGYLLFITGDPICLGSWE 2
           SAI C+G   + WN+++DV +GY++F+TGDP+ LG WE
Sbjct: 94  SAITCKGFCTISWNLKSDVLDGYIIFVTGDPVTLGCWE 131