BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00047669
         (469 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274427.1| PREDICTED: pentatricopeptide repeat-containi...    99   8e-19
gb|EOY23352.1| Pentatricopeptide repeat-containing protein, puta...    93   4e-17
ref|XP_006589520.1| PREDICTED: pentatricopeptide repeat-containi...    91   1e-16
gb|EXC05947.1| hypothetical protein L484_014215 [Morus notabilis]      91   2e-16
gb|EMJ21807.1| hypothetical protein PRUPE_ppa001496mg [Prunus pe...    90   4e-16
ref|XP_004496516.1| PREDICTED: pentatricopeptide repeat-containi...    89   6e-16
ref|XP_002513633.1| pentatricopeptide repeat-containing protein,...    88   1e-15
ref|XP_003592182.1| Pentatricopeptide repeat-containing protein ...    86   5e-15
gb|ESW15474.1| hypothetical protein PHAVU_007G075500g [Phaseolus...    83   3e-14
ref|XP_002865930.1| pentatricopeptide repeat-containing protein ...    79   6e-13
ref|XP_006401775.1| hypothetical protein EUTSA_v10012630mg [Eutr...    78   1e-12
ref|NP_200097.1| pentatricopeptide repeat-containing protein [Ar...    77   3e-12
ref|XP_006281960.1| hypothetical protein CARUB_v10028179mg [Caps...    76   5e-12
ref|XP_002305943.2| hypothetical protein POPTR_0004s07030g [Popu...    74   3e-11
gb|EXB68021.1| hypothetical protein L484_009628 [Morus notabilis]      73   4e-11
ref|XP_003559087.1| PREDICTED: pentatricopeptide repeat-containi...    73   4e-11
gb|AFW67004.1| putative pentatricopeptide repeat family protein ...    72   8e-11
gb|AFW67003.1| putative pentatricopeptide repeat family protein ...    72   8e-11
ref|XP_004981076.1| PREDICTED: pentatricopeptide repeat-containi...    72   1e-10
ref|XP_004981075.1| PREDICTED: pentatricopeptide repeat-containi...    72   1e-10

>ref|XP_002274427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
           chloroplastic [Vitis vinifera]
           gi|302143764|emb|CBI22625.3| unnamed protein product
           [Vitis vinifera]
          Length = 880

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 46/72 (63%), Positives = 55/72 (76%)
 Frame = +3

Query: 12  IETMPLKPDVSIYKTLLASCRRHRNLVLGECTARKAMEIDQSDPTIYALLAGLYDDAGKV 191
           IETMP KPD  IYKTLL +C+ H N+ LGE  AR+ +E+D SDP  Y LLA LYDD+G+ 
Sbjct: 680 IETMPFKPDALIYKTLLGACKLHGNIPLGEHMARQGLELDPSDPAFYVLLANLYDDSGRS 739

Query: 192 EWGEQTRRMMRE 227
           E GE+TRRMMRE
Sbjct: 740 ELGEKTRRMMRE 751


>gb|EOY23352.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
           cacao]
          Length = 884

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 40/72 (55%), Positives = 56/72 (77%)
 Frame = +3

Query: 12  IETMPLKPDVSIYKTLLASCRRHRNLVLGECTARKAMEIDQSDPTIYALLAGLYDDAGKV 191
           ++TMP + D SIYKTLL +C+ HRN+ L E  AR+ +E+D SDP  Y LLA LYDD+G+ 
Sbjct: 683 VQTMPFRADASIYKTLLRACKAHRNIPLAEDMARRGLELDPSDPAFYILLANLYDDSGRH 742

Query: 192 EWGEQTRRMMRE 227
           ++GE+TR++MRE
Sbjct: 743 DFGEKTRKLMRE 754


>ref|XP_006589520.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
            chloroplastic-like [Glycine max]
          Length = 881

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 49/119 (41%), Positives = 74/119 (62%)
 Frame = +3

Query: 12   IETMPLKPDVSIYKTLLASCRRHRNLVLGECTARKAMEIDQSDPTIYALLAGLYDDAGKV 191
            IETMP KPD  IYKTLL +C  H N+ LGE  AR+ +E+D  DP IY LLA LYD+AG  
Sbjct: 683  IETMPFKPDSVIYKTLLNACNLHGNVPLGEDMARRCLELDPCDPAIYLLLASLYDNAGLP 742

Query: 192  EWGEQTRRMMREIIPKREARI*SNW*PTIDAAYERTMQEQLGSFVLMSQSTCIMSKNQN 368
            ++G++TR++MRE   +R  R    W       Y  + +E++G+  +  +   ++++ +N
Sbjct: 743  DFGDKTRKLMRERGLRRSPR--QCWMEVKSKIYLFSAREKIGNDEINEKLESLITEIKN 799


>gb|EXC05947.1| hypothetical protein L484_014215 [Morus notabilis]
          Length = 805

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 38/72 (52%), Positives = 56/72 (77%)
 Frame = +3

Query: 12  IETMPLKPDVSIYKTLLASCRRHRNLVLGECTARKAMEIDQSDPTIYALLAGLYDDAGKV 191
           I++MP KPD  +YKTLL +C+ HRN+ LGE  AR+ +E+D SDPT Y+LLA L+DD+G+ 
Sbjct: 605 IDSMPFKPDTLVYKTLLGACKLHRNIPLGEDMARRGLELDPSDPTFYSLLANLFDDSGRS 664

Query: 192 EWGEQTRRMMRE 227
           + G +TR +M++
Sbjct: 665 DLGRKTRELMKD 676


>gb|EMJ21807.1| hypothetical protein PRUPE_ppa001496mg [Prunus persica]
          Length = 814

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 40/72 (55%), Positives = 53/72 (73%)
 Frame = +3

Query: 12  IETMPLKPDVSIYKTLLASCRRHRNLVLGECTARKAMEIDQSDPTIYALLAGLYDDAGKV 191
           I TMP KPD  IYKTLL +C+ HRN+ LGE  AR+ +E+D SDP  Y LLA LY+++G+ 
Sbjct: 605 IMTMPFKPDALIYKTLLGACKSHRNIALGEYVARQGIELDPSDPAFYVLLANLYEESGQP 664

Query: 192 EWGEQTRRMMRE 227
           +  + TRR+MRE
Sbjct: 665 DLAKSTRRVMRE 676


>ref|XP_004496516.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
           chloroplastic-like [Cicer arietinum]
          Length = 885

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 42/72 (58%), Positives = 54/72 (75%)
 Frame = +3

Query: 12  IETMPLKPDVSIYKTLLASCRRHRNLVLGECTARKAMEIDQSDPTIYALLAGLYDDAGKV 191
           IETMP +PD  I KTLL +C  H N+ LGE  AR+ +E+D SDP IY LLA LYD+AG  
Sbjct: 687 IETMPFEPDSMICKTLLNACNLHGNVALGEDMARRCLELDPSDPAIYLLLANLYDNAGLS 746

Query: 192 EWGEQTRRMMRE 227
           ++GE+TRR+M+E
Sbjct: 747 DFGEKTRRLMKE 758


>ref|XP_002513633.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223547541|gb|EEF49036.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 777

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 40/72 (55%), Positives = 54/72 (75%)
 Frame = +3

Query: 12  IETMPLKPDVSIYKTLLASCRRHRNLVLGECTARKAMEIDQSDPTIYALLAGLYDDAGKV 191
           IETMPL+PD SIYKTLLA+C  HRN+ LGE  AR+ +E++  DP  + LL  LYDD G+ 
Sbjct: 684 IETMPLEPDASIYKTLLAACSIHRNMNLGEDVARRGLELNPLDPAFHLLLVKLYDDCGRY 743

Query: 192 EWGEQTRRMMRE 227
           + GE+TRR +++
Sbjct: 744 DLGEKTRRSIKQ 755


>ref|XP_003592182.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355481230|gb|AES62433.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 912

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 42/72 (58%), Positives = 52/72 (72%)
 Frame = +3

Query: 12  IETMPLKPDVSIYKTLLASCRRHRNLVLGECTARKAMEIDQSDPTIYALLAGLYDDAGKV 191
           IE M  KPD  I KTLL +C  H N+ LGE  AR+ +E+D SDP IY LLA LYD+AG  
Sbjct: 681 IEKMSFKPDSLICKTLLNACNLHGNVALGEDMARRCLELDPSDPAIYLLLANLYDNAGLS 740

Query: 192 EWGEQTRRMMRE 227
           ++GE+TRR+MRE
Sbjct: 741 DFGEKTRRLMRE 752


>gb|ESW15474.1| hypothetical protein PHAVU_007G075500g [Phaseolus vulgaris]
          Length = 882

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 40/80 (50%), Positives = 55/80 (68%)
 Frame = +3

Query: 12  IETMPLKPDVSIYKTLLASCRRHRNLVLGECTARKAMEIDQSDPTIYALLAGLYDDAGKV 191
           IETMP  PD   YKTLL +C+ H N+ LGE  AR+ +E+D  DP +Y LLA LYD+A   
Sbjct: 684 IETMPFMPDSVTYKTLLNACKLHGNVPLGEDMARRCLELDPCDPAVYLLLASLYDNARLS 743

Query: 192 EWGEQTRRMMREIIPKREAR 251
           ++G++TR++MRE   +R  R
Sbjct: 744 DFGDKTRKLMRERGLRRSPR 763


>ref|XP_002865930.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297311765|gb|EFH42189.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 878

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 38/72 (52%), Positives = 49/72 (68%)
 Frame = +3

Query: 12  IETMPLKPDVSIYKTLLASCRRHRNLVLGECTARKAMEIDQSDPTIYALLAGLYDDAGKV 191
           +ETM LKP+  I+KTLL +CR H NL LGE  A K + +  SDP  Y LLA LYD++GK 
Sbjct: 687 VETMHLKPNAMIFKTLLRACRYHGNLSLGEDMANKGLALAPSDPAFYILLADLYDESGKP 746

Query: 192 EWGEQTRRMMRE 227
           E  ++TR +M E
Sbjct: 747 ELAQKTRNLMSE 758


>ref|XP_006401775.1| hypothetical protein EUTSA_v10012630mg [Eutrema salsugineum]
           gi|557102865|gb|ESQ43228.1| hypothetical protein
           EUTSA_v10012630mg [Eutrema salsugineum]
          Length = 897

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 37/72 (51%), Positives = 49/72 (68%)
 Frame = +3

Query: 12  IETMPLKPDVSIYKTLLASCRRHRNLVLGECTARKAMEIDQSDPTIYALLAGLYDDAGKV 191
           +ETMPL P+  I+KTLL +CR H +L LGE  A K + +  SDP +Y LLA LYD+ GK 
Sbjct: 689 VETMPLGPNALIFKTLLRACRYHGDLSLGEDMANKGLALAPSDPALYILLADLYDETGKP 748

Query: 192 EWGEQTRRMMRE 227
           E  ++TR +M E
Sbjct: 749 ELAQKTRNLMSE 760


>ref|NP_200097.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75171558|sp|Q9FLX6.1|PP430_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g52850, chloroplastic; Flags: Precursor
           gi|10177099|dbj|BAB10433.1| selenium-binding
           protein-like [Arabidopsis thaliana]
           gi|332008885|gb|AED96268.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 893

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 37/72 (51%), Positives = 49/72 (68%)
 Frame = +3

Query: 12  IETMPLKPDVSIYKTLLASCRRHRNLVLGECTARKAMEIDQSDPTIYALLAGLYDDAGKV 191
           +ETM LKP+  I+KTLL +CR   NL LGE  A K + +  SDP +Y LLA LYD++GK 
Sbjct: 688 VETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPALYILLADLYDESGKP 747

Query: 192 EWGEQTRRMMRE 227
           E  ++TR +M E
Sbjct: 748 ELAQKTRNLMTE 759


>ref|XP_006281960.1| hypothetical protein CARUB_v10028179mg [Capsella rubella]
           gi|482550664|gb|EOA14858.1| hypothetical protein
           CARUB_v10028179mg [Capsella rubella]
          Length = 895

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 36/72 (50%), Positives = 47/72 (65%)
 Frame = +3

Query: 12  IETMPLKPDVSIYKTLLASCRRHRNLVLGECTARKAMEIDQSDPTIYALLAGLYDDAGKV 191
           +ETM L+P+  I+KTLL +CR H NL LGE  A K + +   DP  Y LLA LYD+ GK 
Sbjct: 688 VETMQLRPNALIFKTLLRACRYHGNLALGEDMANKGLALAPFDPAFYILLADLYDECGKP 747

Query: 192 EWGEQTRRMMRE 227
           E  ++TR +M E
Sbjct: 748 ELAQKTRNLMSE 759


>ref|XP_002305943.2| hypothetical protein POPTR_0004s07030g [Populus trichocarpa]
           gi|550340500|gb|EEE86454.2| hypothetical protein
           POPTR_0004s07030g [Populus trichocarpa]
          Length = 771

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 33/72 (45%), Positives = 50/72 (69%)
 Frame = +3

Query: 12  IETMPLKPDVSIYKTLLASCRRHRNLVLGECTARKAMEIDQSDPTIYALLAGLYDDAGKV 191
           +ETMP++P+ SIYKTLLA+C+ HR + LGE  A + +++D SDP    +LA LYD +G+ 
Sbjct: 683 LETMPIRPNASIYKTLLAACKVHRIVPLGEDIASRGLKLDPSDPAFNLMLANLYDSSGRP 742

Query: 192 EWGEQTRRMMRE 227
           +     RR +R+
Sbjct: 743 DLAATIRRSVRD 754


>gb|EXB68021.1| hypothetical protein L484_009628 [Morus notabilis]
          Length = 1033

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 32/78 (41%), Positives = 52/78 (66%)
 Frame = +3

Query: 12   IETMPLKPDVSIYKTLLASCRRHRNLVLGECTARKAMEIDQSDPTIYALLAGLYDDAGKV 191
            +E MP+KPD  +++TLL++C  H+N  +GE  A   +E++  D   Y LL+ +Y  AGK 
Sbjct: 827  VEKMPIKPDAMVWRTLLSACTVHKNTKIGEFAAHHLLELEPEDSATYVLLSNMYAVAGKW 886

Query: 192  EWGEQTRRMMREIIPKRE 245
            ++ +QTRR+M+E   K+E
Sbjct: 887  DFRDQTRRLMKERGVKKE 904


>ref|XP_003559087.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
           chloroplastic-like [Brachypodium distachyon]
          Length = 719

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 34/72 (47%), Positives = 49/72 (68%)
 Frame = +3

Query: 3   ACTIETMPLKPDVSIYKTLLASCRRHRNLVLGECTARKAMEIDQSDPTIYALLAGLYDDA 182
           ACTI+TMP++PD+S+Y+ LLA C  H +LV+GE  ARKA+E+  SD     +L+G+Y   
Sbjct: 638 ACTIDTMPVQPDLSMYRNLLAFCELHNDLVVGETIARKALELYPSDTVFQNILSGIYGAP 697

Query: 183 GKVEWGEQTRRM 218
            K E+  +T  M
Sbjct: 698 WKDEFSARTHMM 709


>gb|AFW67004.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 913

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 40/81 (49%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
 Frame = +3

Query: 12  IETMPLKPDVSIYKTLLASCRRHRNLVLGECTARKAMEIDQSDPTIYALLAGLYDDAGKV 191
           IE MP +PDV I+KTLLASC+ HRNL +G+  A K ME+ + D   Y L++ LY  A   
Sbjct: 592 IENMPFEPDVLIWKTLLASCKLHRNLDIGKLAADKLMELSERDSASYVLMSNLY--AMHE 649

Query: 192 EW--GEQTRRMMREIIPKREA 248
           EW   E+ RR M EI  K++A
Sbjct: 650 EWRDAERVRRRMDEIGVKKDA 670


>gb|AFW67003.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 719

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 40/81 (49%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
 Frame = +3

Query: 12  IETMPLKPDVSIYKTLLASCRRHRNLVLGECTARKAMEIDQSDPTIYALLAGLYDDAGKV 191
           IE MP +PDV I+KTLLASC+ HRNL +G+  A K ME+ + D   Y L++ LY  A   
Sbjct: 592 IENMPFEPDVLIWKTLLASCKLHRNLDIGKLAADKLMELSERDSASYVLMSNLY--AMHE 649

Query: 192 EW--GEQTRRMMREIIPKREA 248
           EW   E+ RR M EI  K++A
Sbjct: 650 EWRDAERVRRRMDEIGVKKDA 670


>ref|XP_004981076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like isoform X2 [Setaria italica]
          Length = 681

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 36/79 (45%), Positives = 51/79 (64%)
 Frame = +3

Query: 12  IETMPLKPDVSIYKTLLASCRRHRNLVLGECTARKAMEIDQSDPTIYALLAGLYDDAGKV 191
           IE MP +PDV I+KTLLASC+ HRNL +G+  A K ME+ + D   Y L++ +Y   G+ 
Sbjct: 555 IEKMPFEPDVLIWKTLLASCKLHRNLDMGKLAADKLMELSERDSASYVLMSNIYAMHGEW 614

Query: 192 EWGEQTRRMMREIIPKREA 248
           +   + RR M E+  K+EA
Sbjct: 615 QDAGRVRRRMDEVGVKKEA 633


>ref|XP_004981075.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like isoform X1 [Setaria italica]
          Length = 683

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 36/79 (45%), Positives = 51/79 (64%)
 Frame = +3

Query: 12  IETMPLKPDVSIYKTLLASCRRHRNLVLGECTARKAMEIDQSDPTIYALLAGLYDDAGKV 191
           IE MP +PDV I+KTLLASC+ HRNL +G+  A K ME+ + D   Y L++ +Y   G+ 
Sbjct: 555 IEKMPFEPDVLIWKTLLASCKLHRNLDMGKLAADKLMELSERDSASYVLMSNIYAMHGEW 614

Query: 192 EWGEQTRRMMREIIPKREA 248
           +   + RR M E+  K+EA
Sbjct: 615 QDAGRVRRRMDEVGVKKEA 633