BLASTX nr result
ID: Zingiber24_contig00047615
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00047615
(382 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004973705.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 91 1e-16
ref|XP_004973704.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 91 1e-16
tpg|DAA48490.1| TPA: putative ubiquitin carboxyl-terminal hydrol... 91 1e-16
tpg|DAA48489.1| TPA: putative ubiquitin carboxyl-terminal hydrol... 91 1e-16
ref|XP_002445647.1| hypothetical protein SORBIDRAFT_07g023330 [S... 89 8e-16
ref|XP_003574640.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 86 5e-15
ref|XP_004957062.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 86 7e-15
ref|XP_004957061.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 86 7e-15
gb|EMT33844.1| Ubiquitin carboxyl-terminal hydrolase 17 [Aegilop... 85 1e-14
gb|EMS47345.1| Ubiquitin carboxyl-terminal hydrolase 17 [Triticu... 84 2e-14
ref|XP_002462507.1| hypothetical protein SORBIDRAFT_02g026980 [S... 82 6e-14
ref|NP_001062051.1| Os08g0478500 [Oryza sativa Japonica Group] g... 80 2e-13
gb|EEE68872.1| hypothetical protein OsJ_27681 [Oryza sativa Japo... 80 2e-13
gb|EAZ07363.1| hypothetical protein OsI_29613 [Oryza sativa Indi... 80 2e-13
ref|XP_006660217.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 80 3e-13
ref|XP_006841208.1| hypothetical protein AMTR_s00135p00021060 [A... 79 5e-13
dbj|BAD33960.1| putative ubiquitin-specific protease [Oryza sati... 76 4e-12
ref|NP_001063411.2| Os09g0464400 [Oryza sativa Japonica Group] g... 76 4e-12
gb|EEC84719.1| hypothetical protein OsI_31685 [Oryza sativa Indi... 76 4e-12
ref|XP_002307344.2| hypothetical protein POPTR_0005s17820g [Popu... 74 2e-11
>ref|XP_004973705.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like isoform X2
[Setaria italica]
Length = 978
Score = 91.3 bits (225), Expect = 1e-16
Identities = 44/81 (54%), Positives = 58/81 (71%)
Frame = +3
Query: 138 SIRSDDASGVTLKDLSTPAKAFLKQPTPYKTSRNYPPELMLFPFDLFIKLYNPGKIQLHP 317
S + + SG T +L+T K ++Q T K R+YP EL LFP++LF+KLY+ K++LHP
Sbjct: 387 SSKPSERSGSTANNLATSLKKIVRQQTASKVVRHYPSELTLFPYELFVKLYD--KVELHP 444
Query: 318 CGLTNSGNSCYANAVLQCLIF 380
GL N GNSCYANAVLQCL+F
Sbjct: 445 FGLHNLGNSCYANAVLQCLMF 465
>ref|XP_004973704.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like isoform X1
[Setaria italica]
Length = 993
Score = 91.3 bits (225), Expect = 1e-16
Identities = 44/81 (54%), Positives = 58/81 (71%)
Frame = +3
Query: 138 SIRSDDASGVTLKDLSTPAKAFLKQPTPYKTSRNYPPELMLFPFDLFIKLYNPGKIQLHP 317
S + + SG T +L+T K ++Q T K R+YP EL LFP++LF+KLY+ K++LHP
Sbjct: 402 SSKPSERSGSTANNLATSLKKIVRQQTASKVVRHYPSELTLFPYELFVKLYD--KVELHP 459
Query: 318 CGLTNSGNSCYANAVLQCLIF 380
GL N GNSCYANAVLQCL+F
Sbjct: 460 FGLHNLGNSCYANAVLQCLMF 480
>tpg|DAA48490.1| TPA: putative ubiquitin carboxyl-terminal hydrolase superfamily
protein [Zea mays]
Length = 973
Score = 91.3 bits (225), Expect = 1e-16
Identities = 48/101 (47%), Positives = 66/101 (65%), Gaps = 1/101 (0%)
Frame = +3
Query: 81 GSQTITSCEYLEIGNALRG-SIRSDDASGVTLKDLSTPAKAFLKQPTPYKTSRNYPPELM 257
GS +IT ++ ++L S + D SG T +L+T K ++Q T K R+YP E
Sbjct: 382 GSLSITPNNSSKVADSLPDRSFKPSDRSGSTTNNLATSLKKMVRQQTAPKVVRHYPSEST 441
Query: 258 LFPFDLFIKLYNPGKIQLHPCGLTNSGNSCYANAVLQCLIF 380
LFP++LF+KLY+ K++LHP GL N GNSCYANAV QCL+F
Sbjct: 442 LFPYELFVKLYS--KVELHPFGLHNLGNSCYANAVFQCLMF 480
>tpg|DAA48489.1| TPA: putative ubiquitin carboxyl-terminal hydrolase superfamily
protein [Zea mays]
Length = 656
Score = 91.3 bits (225), Expect = 1e-16
Identities = 48/101 (47%), Positives = 66/101 (65%), Gaps = 1/101 (0%)
Frame = +3
Query: 81 GSQTITSCEYLEIGNALRG-SIRSDDASGVTLKDLSTPAKAFLKQPTPYKTSRNYPPELM 257
GS +IT ++ ++L S + D SG T +L+T K ++Q T K R+YP E
Sbjct: 382 GSLSITPNNSSKVADSLPDRSFKPSDRSGSTTNNLATSLKKMVRQQTAPKVVRHYPSEST 441
Query: 258 LFPFDLFIKLYNPGKIQLHPCGLTNSGNSCYANAVLQCLIF 380
LFP++LF+KLY+ K++LHP GL N GNSCYANAV QCL+F
Sbjct: 442 LFPYELFVKLYS--KVELHPFGLHNLGNSCYANAVFQCLMF 480
>ref|XP_002445647.1| hypothetical protein SORBIDRAFT_07g023330 [Sorghum bicolor]
gi|241941997|gb|EES15142.1| hypothetical protein
SORBIDRAFT_07g023330 [Sorghum bicolor]
Length = 998
Score = 88.6 bits (218), Expect = 8e-16
Identities = 43/79 (54%), Positives = 56/79 (70%)
Frame = +3
Query: 144 RSDDASGVTLKDLSTPAKAFLKQPTPYKTSRNYPPELMLFPFDLFIKLYNPGKIQLHPCG 323
+ D SG T +L+T K ++Q T K R+YP E LFP++LF+KLY GK++L+P G
Sbjct: 409 KPSDRSGSTANNLATSLKKMVRQQTAPKVVRHYPSESTLFPYELFVKLY--GKVELNPFG 466
Query: 324 LTNSGNSCYANAVLQCLIF 380
L N GNSCYANAVLQCL+F
Sbjct: 467 LHNVGNSCYANAVLQCLMF 485
>ref|XP_003574640.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like
[Brachypodium distachyon]
Length = 970
Score = 85.9 bits (211), Expect = 5e-15
Identities = 49/126 (38%), Positives = 72/126 (57%), Gaps = 2/126 (1%)
Frame = +3
Query: 9 ETQSLISCA--LRSLPCASNQLSYSSGSQTITSCEYLEIGNALRGSIRSDDASGVTLKDL 182
E++ ++C + S C + L+ + S C N + + + +G T L
Sbjct: 351 ESKIKVTCTDNIESSKCVPSVLAANKVSSIRDVCSVTP--NPSKRADNPSERAGSTANSL 408
Query: 183 STPAKAFLKQPTPYKTSRNYPPELMLFPFDLFIKLYNPGKIQLHPCGLTNSGNSCYANAV 362
++ K ++Q T K R+YP EL LFP++LFIKLY+ K++L P GL N GNSCYANAV
Sbjct: 409 ASSLKKIVRQQTASKVVRHYPSELTLFPYELFIKLYD--KVELRPFGLHNLGNSCYANAV 466
Query: 363 LQCLIF 380
LQCL+F
Sbjct: 467 LQCLMF 472
>ref|XP_004957062.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like isoform X2
[Setaria italica]
Length = 887
Score = 85.5 bits (210), Expect = 7e-15
Identities = 51/116 (43%), Positives = 68/116 (58%), Gaps = 2/116 (1%)
Frame = +3
Query: 39 RSLPCAS--NQLSYSSGSQTITSCEYLEIGNALRGSIRSDDASGVTLKDLSTPAKAFLKQ 212
R+ PC S +++S + S S + G+ G ++SGV + ST K + +Q
Sbjct: 251 RNSPCMSAVDKVSSAHSSAYCLSHNPSKRGDNSHGLCARSESSGVMPNNPSTEKK-YARQ 309
Query: 213 PTPYKTSRNYPPELMLFPFDLFIKLYNPGKIQLHPCGLTNSGNSCYANAVLQCLIF 380
T K R+Y EL LFP+ FI+LYN K++LHP GL N GNSCYANAVLQCL F
Sbjct: 310 QTAIKVVRHYATELALFPYKHFIELYNFEKLELHPFGLCNLGNSCYANAVLQCLAF 365
>ref|XP_004957061.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like isoform X1
[Setaria italica]
Length = 914
Score = 85.5 bits (210), Expect = 7e-15
Identities = 51/116 (43%), Positives = 68/116 (58%), Gaps = 2/116 (1%)
Frame = +3
Query: 39 RSLPCAS--NQLSYSSGSQTITSCEYLEIGNALRGSIRSDDASGVTLKDLSTPAKAFLKQ 212
R+ PC S +++S + S S + G+ G ++SGV + ST K + +Q
Sbjct: 251 RNSPCMSAVDKVSSAHSSAYCLSHNPSKRGDNSHGLCARSESSGVMPNNPSTEKK-YARQ 309
Query: 213 PTPYKTSRNYPPELMLFPFDLFIKLYNPGKIQLHPCGLTNSGNSCYANAVLQCLIF 380
T K R+Y EL LFP+ FI+LYN K++LHP GL N GNSCYANAVLQCL F
Sbjct: 310 QTAIKVVRHYATELALFPYKHFIELYNFEKLELHPFGLCNLGNSCYANAVLQCLAF 365
>gb|EMT33844.1| Ubiquitin carboxyl-terminal hydrolase 17 [Aegilops tauschii]
Length = 911
Score = 84.7 bits (208), Expect = 1e-14
Identities = 43/86 (50%), Positives = 55/86 (63%)
Frame = +3
Query: 123 NALRGSIRSDDASGVTLKDLSTPAKAFLKQPTPYKTSRNYPPELMLFPFDLFIKLYNPGK 302
N R + D G +L+T K ++Q T K R+YP EL LFP+D+FIKLY+ K
Sbjct: 315 NPSRRADNPTDRGGSAANNLATSLKKIVRQQTTPKVVRHYPSELTLFPYDVFIKLYD--K 372
Query: 303 IQLHPCGLTNSGNSCYANAVLQCLIF 380
++L P GL N GNSCYAN VLQCL+F
Sbjct: 373 VELRPFGLHNLGNSCYANVVLQCLMF 398
>gb|EMS47345.1| Ubiquitin carboxyl-terminal hydrolase 17 [Triticum urartu]
Length = 967
Score = 84.0 bits (206), Expect = 2e-14
Identities = 41/76 (53%), Positives = 52/76 (68%)
Frame = +3
Query: 153 DASGVTLKDLSTPAKAFLKQPTPYKTSRNYPPELMLFPFDLFIKLYNPGKIQLHPCGLTN 332
D G +L+T K ++Q T K R+YP EL LFP+D+FIKLY+ K++L P GL N
Sbjct: 411 DRGGSAANNLATSLKKIVRQQTTPKVVRHYPSELTLFPYDVFIKLYD--KVELRPFGLHN 468
Query: 333 SGNSCYANAVLQCLIF 380
GNSCYAN VLQCL+F
Sbjct: 469 LGNSCYANVVLQCLMF 484
>ref|XP_002462507.1| hypothetical protein SORBIDRAFT_02g026980 [Sorghum bicolor]
gi|241925884|gb|EER99028.1| hypothetical protein
SORBIDRAFT_02g026980 [Sorghum bicolor]
Length = 867
Score = 82.4 bits (202), Expect = 6e-14
Identities = 49/117 (41%), Positives = 67/117 (57%), Gaps = 2/117 (1%)
Frame = +3
Query: 36 LRSLPC--ASNQLSYSSGSQTITSCEYLEIGNALRGSIRSDDASGVTLKDLSTPAKAFLK 209
LR+LPC A +Q+ + S L+ + G + SGV + + S+ K + +
Sbjct: 259 LRNLPCIPAVDQVPSTHSSAYCLPSNLLKGEDNPPGPCARPENSGV-MPNNSSKEKNYAR 317
Query: 210 QPTPYKTSRNYPPELMLFPFDLFIKLYNPGKIQLHPCGLTNSGNSCYANAVLQCLIF 380
Q T K RNYP E MLF + F++LY+ K++LHP GL N GNSCYAN VLQCL F
Sbjct: 318 QQTTSKAVRNYPTESMLFSYKNFVELYSFNKLELHPFGLYNLGNSCYANVVLQCLAF 374
>ref|NP_001062051.1| Os08g0478500 [Oryza sativa Japonica Group]
gi|42407867|dbj|BAD09009.1| putative ubiquitin-specific
protease [Oryza sativa Japonica Group]
gi|113624020|dbj|BAF23965.1| Os08g0478500 [Oryza sativa
Japonica Group]
Length = 978
Score = 80.5 bits (197), Expect = 2e-13
Identities = 44/107 (41%), Positives = 62/107 (57%)
Frame = +3
Query: 60 NQLSYSSGSQTITSCEYLEIGNALRGSIRSDDASGVTLKDLSTPAKAFLKQPTPYKTSRN 239
+++S G +++T N + + + S T L+T K ++Q T K R+
Sbjct: 366 DKVSPVPGGRSVTPNSSKRADNIAERNSKPSEKSISTANSLATSLKKIVRQQTAPKVVRH 425
Query: 240 YPPELMLFPFDLFIKLYNPGKIQLHPCGLTNSGNSCYANAVLQCLIF 380
YP E FP++LFIKLY K++L P GL N GNSCYANAVLQCL+F
Sbjct: 426 YPSEPTHFPYELFIKLYE--KVELQPFGLHNLGNSCYANAVLQCLMF 470
>gb|EEE68872.1| hypothetical protein OsJ_27681 [Oryza sativa Japonica Group]
Length = 897
Score = 80.5 bits (197), Expect = 2e-13
Identities = 44/107 (41%), Positives = 62/107 (57%)
Frame = +3
Query: 60 NQLSYSSGSQTITSCEYLEIGNALRGSIRSDDASGVTLKDLSTPAKAFLKQPTPYKTSRN 239
+++S G +++T N + + + S T L+T K ++Q T K R+
Sbjct: 285 DKVSPVPGGRSVTPNSSKRADNIAERNSKPSEKSISTANSLATSLKKIVRQQTAPKVVRH 344
Query: 240 YPPELMLFPFDLFIKLYNPGKIQLHPCGLTNSGNSCYANAVLQCLIF 380
YP E FP++LFIKLY K++L P GL N GNSCYANAVLQCL+F
Sbjct: 345 YPSEPTHFPYELFIKLYE--KVELQPFGLHNLGNSCYANAVLQCLMF 389
>gb|EAZ07363.1| hypothetical protein OsI_29613 [Oryza sativa Indica Group]
Length = 978
Score = 80.5 bits (197), Expect = 2e-13
Identities = 44/107 (41%), Positives = 62/107 (57%)
Frame = +3
Query: 60 NQLSYSSGSQTITSCEYLEIGNALRGSIRSDDASGVTLKDLSTPAKAFLKQPTPYKTSRN 239
+++S G +++T N + + + S T L+T K ++Q T K R+
Sbjct: 366 DKVSPVPGGRSVTPNSSKRADNIAERNSKPSEKSISTANSLATSLKKIVRQQTAPKVVRH 425
Query: 240 YPPELMLFPFDLFIKLYNPGKIQLHPCGLTNSGNSCYANAVLQCLIF 380
YP E FP++LFIKLY K++L P GL N GNSCYANAVLQCL+F
Sbjct: 426 YPSEPTHFPYELFIKLYE--KVELQPFGLHNLGNSCYANAVLQCLMF 470
>ref|XP_006660217.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Oryza
brachyantha]
Length = 992
Score = 80.1 bits (196), Expect = 3e-13
Identities = 43/107 (40%), Positives = 64/107 (59%)
Frame = +3
Query: 60 NQLSYSSGSQTITSCEYLEIGNALRGSIRSDDASGVTLKDLSTPAKAFLKQPTPYKTSRN 239
N+++ + G +++T N + + + + T L+T K ++Q T K R+
Sbjct: 376 NKVAPTPGGRSVTPNSSKRADNISERNPKPSEKAISTANTLATSLKKIVRQQTVPKVVRH 435
Query: 240 YPPELMLFPFDLFIKLYNPGKIQLHPCGLTNSGNSCYANAVLQCLIF 380
YP E FP++LFIKLY+ K++L P GL N GNSCYANAVLQCL+F
Sbjct: 436 YPSEPTHFPYELFIKLYD--KVELQPFGLHNLGNSCYANAVLQCLMF 480
>ref|XP_006841208.1| hypothetical protein AMTR_s00135p00021060 [Amborella trichopoda]
gi|548843124|gb|ERN02883.1| hypothetical protein
AMTR_s00135p00021060 [Amborella trichopoda]
Length = 1083
Score = 79.3 bits (194), Expect = 5e-13
Identities = 50/123 (40%), Positives = 66/123 (53%), Gaps = 14/123 (11%)
Frame = +3
Query: 54 ASNQLSYSSGSQTITS----CEYLEIGNALRGSIRSDDASGVTLKDLSTPAKAFLKQPTP 221
+S SY G + +S E L G++ S S+ SG L T + ++Q
Sbjct: 435 SSGHSSYGDGRGSASSKANYTEVLSTGSSQAASPVSNGISG----GLRTSVRKVVQQFRV 490
Query: 222 YKTSRNYP----------PELMLFPFDLFIKLYNPGKIQLHPCGLTNSGNSCYANAVLQC 371
K S++ P P MLFP+D+F KLYN +++L PCGLTN GNSCYANAVLQC
Sbjct: 491 SKLSKHNPMFLANEVARKPSKMLFPYDMFAKLYNWERVELWPCGLTNCGNSCYANAVLQC 550
Query: 372 LIF 380
L F
Sbjct: 551 LTF 553
>dbj|BAD33960.1| putative ubiquitin-specific protease [Oryza sativa Japonica Group]
gi|222641732|gb|EEE69864.1| hypothetical protein
OsJ_29670 [Oryza sativa Japonica Group]
Length = 940
Score = 76.3 bits (186), Expect = 4e-12
Identities = 34/58 (58%), Positives = 42/58 (72%)
Frame = +3
Query: 207 KQPTPYKTSRNYPPELMLFPFDLFIKLYNPGKIQLHPCGLTNSGNSCYANAVLQCLIF 380
+Q K R+YP E+ LFP++ F+KLYN K++L P GL N GNSCYANAVLQCL F
Sbjct: 345 RQQAAAKVVRHYPSEMTLFPYEHFVKLYNFDKVELRPFGLVNLGNSCYANAVLQCLAF 402
>ref|NP_001063411.2| Os09g0464400 [Oryza sativa Japonica Group]
gi|255678959|dbj|BAF25325.2| Os09g0464400 [Oryza sativa
Japonica Group]
Length = 918
Score = 76.3 bits (186), Expect = 4e-12
Identities = 34/58 (58%), Positives = 42/58 (72%)
Frame = +3
Query: 207 KQPTPYKTSRNYPPELMLFPFDLFIKLYNPGKIQLHPCGLTNSGNSCYANAVLQCLIF 380
+Q K R+YP E+ LFP++ F+KLYN K++L P GL N GNSCYANAVLQCL F
Sbjct: 345 RQQAAAKVVRHYPSEMTLFPYEHFVKLYNFDKVELRPFGLVNLGNSCYANAVLQCLAF 402
>gb|EEC84719.1| hypothetical protein OsI_31685 [Oryza sativa Indica Group]
Length = 927
Score = 76.3 bits (186), Expect = 4e-12
Identities = 34/58 (58%), Positives = 42/58 (72%)
Frame = +3
Query: 207 KQPTPYKTSRNYPPELMLFPFDLFIKLYNPGKIQLHPCGLTNSGNSCYANAVLQCLIF 380
+Q K R+YP E+ LFP++ F+KLYN K++L P GL N GNSCYANAVLQCL F
Sbjct: 345 RQQAAAKVVRHYPSEMTLFPYEHFVKLYNFDKVELRPFGLVNLGNSCYANAVLQCLAF 402
>ref|XP_002307344.2| hypothetical protein POPTR_0005s17820g [Populus trichocarpa]
gi|550339194|gb|EEE94340.2| hypothetical protein
POPTR_0005s17820g [Populus trichocarpa]
Length = 1125
Score = 74.3 bits (181), Expect = 2e-11
Identities = 43/112 (38%), Positives = 61/112 (54%), Gaps = 3/112 (2%)
Frame = +3
Query: 54 ASNQLSYSSGSQTITSCEY--LEIGNALRGSIRSDDASGVT-LKDLSTPAKAFLKQPTPY 224
+ L+ + G +++S +Y +E+G A + S S + LK + P
Sbjct: 505 SQTHLTSTIGGHSVSSVQYGNVELGAASSSQMASSSPSSINGLKSSVWKVVDQFRGPKCG 564
Query: 225 KTSRNYPPELMLFPFDLFIKLYNPGKIQLHPCGLTNSGNSCYANAVLQCLIF 380
+ S+ LFP+DLF+KLYN K ++ PCGL N GNSCYANAVLQCL F
Sbjct: 565 RYSKKG-----LFPYDLFVKLYNSSKAEMRPCGLINCGNSCYANAVLQCLAF 611