BLASTX nr result
ID: Zingiber24_contig00047609
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00047609
(304 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004960622.1| PREDICTED: pentatricopeptide repeat-containi... 119 5e-25
gb|AFW77542.1| putative pentatricopeptide repeat family protein ... 112 5e-23
gb|EMT03568.1| hypothetical protein F775_05716 [Aegilops tauschii] 107 1e-21
gb|EMS52689.1| hypothetical protein TRIUR3_07994 [Triticum urartu] 107 2e-21
ref|XP_003568739.1| PREDICTED: pentatricopeptide repeat-containi... 106 4e-21
ref|XP_006655097.1| PREDICTED: pentatricopeptide repeat-containi... 105 8e-21
ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group] g... 103 2e-20
dbj|BAJ91074.1| predicted protein [Hordeum vulgare subsp. vulgare] 102 7e-20
gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indi... 101 9e-20
ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 99 4e-19
ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containi... 99 4e-19
ref|XP_002321443.2| hypothetical protein POPTR_0015s02060g [Popu... 99 6e-19
ref|XP_006290593.1| hypothetical protein CARUB_v10016682mg [Caps... 99 6e-19
ref|XP_006422178.1| hypothetical protein CICLE_v10006927mg [Citr... 97 2e-18
ref|XP_006404168.1| hypothetical protein EUTSA_v10010119mg [Eutr... 97 2e-18
gb|EMJ18239.1| hypothetical protein PRUPE_ppa001611mg [Prunus pe... 96 6e-18
ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arab... 96 6e-18
ref|NP_190486.2| pentatricopeptide repeat-containing protein [Ar... 96 6e-18
emb|CAB66396.1| putative protein [Arabidopsis thaliana] 96 6e-18
ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containi... 93 3e-17
>ref|XP_004960622.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Setaria italica]
Length = 827
Score = 119 bits (297), Expect = 5e-25
Identities = 56/92 (60%), Positives = 67/92 (72%)
Frame = +1
Query: 28 YQIQSMDMGXXXXXXXXXXXXXXXIGMLSKGQQLHAQLLKAGLRSDMGIGNSLISMYSRC 207
YQ+Q MD+G +G+L+KGQQLHA LKAG SD GIGNSL+SMYSRC
Sbjct: 443 YQVQRMDVGISTFTFASLISAAASVGLLTKGQQLHALSLKAGFGSDRGIGNSLVSMYSRC 502
Query: 208 GSIDDACQAFGEMNDHNVISWTAMITGFAKQG 303
G ++DAC+AF EMNDHNVISWT+MI+G AK G
Sbjct: 503 GCLEDACRAFEEMNDHNVISWTSMISGLAKHG 534
Score = 57.0 bits (136), Expect = 3e-06
Identities = 27/71 (38%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Frame = +1
Query: 100 IGMLSKGQQLHAQLLKAGLRSDMGIGNSLISMYSRCG---SIDDACQAFGEMNDHNVISW 270
+G GQQLH+ L+ GL SD + L+ MY++ S+ +A + F M HNV+SW
Sbjct: 269 LGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHIGQSMHNARKVFNRMPKHNVMSW 328
Query: 271 TAMITGFAKQG 303
TA+++G+ ++G
Sbjct: 329 TALLSGYVQRG 339
>gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 829
Score = 112 bits (280), Expect = 5e-23
Identities = 54/92 (58%), Positives = 64/92 (69%)
Frame = +1
Query: 28 YQIQSMDMGXXXXXXXXXXXXXXXIGMLSKGQQLHAQLLKAGLRSDMGIGNSLISMYSRC 207
YQI+ M++G +GML+KGQ+LHA LKAG SD IGNSL+SMYSRC
Sbjct: 445 YQIERMELGISTFTFGSLISAAASVGMLTKGQRLHALSLKAGFGSDRAIGNSLVSMYSRC 504
Query: 208 GSIDDACQAFGEMNDHNVISWTAMITGFAKQG 303
G + DACQ F EMNDHNVISWT+MI+G AK G
Sbjct: 505 GYLVDACQVFDEMNDHNVISWTSMISGLAKHG 536
Score = 56.6 bits (135), Expect = 3e-06
Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Frame = +1
Query: 100 IGMLSKGQQLHAQLLKAGLRSDMGIGNSLISMYSRCG---SIDDACQAFGEMNDHNVISW 270
+G GQQLH+ L+ GL SD + L+ MY++ S+ +A + F M HNV++W
Sbjct: 268 LGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHNGQSLHNAREVFNRMPKHNVMAW 327
Query: 271 TAMITGFAKQG 303
TA+++G+ ++G
Sbjct: 328 TALLSGYVQRG 338
>gb|EMT03568.1| hypothetical protein F775_05716 [Aegilops tauschii]
Length = 706
Score = 107 bits (268), Expect = 1e-21
Identities = 51/91 (56%), Positives = 64/91 (70%)
Frame = +1
Query: 31 QIQSMDMGXXXXXXXXXXXXXXXIGMLSKGQQLHAQLLKAGLRSDMGIGNSLISMYSRCG 210
QI+SM +G +G+ +KGQQLHA +KAG SD GI NSL+SMYSRCG
Sbjct: 324 QIESMGVGVSTFTFASLLSAATTVGLPTKGQQLHALSIKAGFESDKGISNSLVSMYSRCG 383
Query: 211 SIDDACQAFGEMNDHNVISWTAMITGFAKQG 303
+DDAC+AF EM+DHNVISWT++I+G AK G
Sbjct: 384 YLDDACRAFDEMDDHNVISWTSVISGLAKHG 414
Score = 55.1 bits (131), Expect = 1e-05
Identities = 29/70 (41%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Frame = +1
Query: 103 GMLSKGQQLHAQLLKAGLRSDMGIGNSLISMYSRCG---SIDDACQAFGEMNDHNVISWT 273
G L GQQLH+ +L+ GL SD + L+ MY++ S++ A + F M HNV+SWT
Sbjct: 147 GSLRFGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQSMECARKVFKRMPTHNVMSWT 206
Query: 274 AMITGFAKQG 303
A+I+G+ + G
Sbjct: 207 ALISGYVQCG 216
>gb|EMS52689.1| hypothetical protein TRIUR3_07994 [Triticum urartu]
Length = 685
Score = 107 bits (267), Expect = 2e-21
Identities = 51/91 (56%), Positives = 64/91 (70%)
Frame = +1
Query: 31 QIQSMDMGXXXXXXXXXXXXXXXIGMLSKGQQLHAQLLKAGLRSDMGIGNSLISMYSRCG 210
QI+SMD+G +G+ +KGQQLHA +KAG SD GI NSL+SMYSRCG
Sbjct: 324 QIESMDVGVSTFTFASLLSAATTVGLPTKGQQLHALSIKAGFESDKGISNSLVSMYSRCG 383
Query: 211 SIDDACQAFGEMNDHNVISWTAMITGFAKQG 303
+DDAC+AF EM+D NVISWT++I+G AK G
Sbjct: 384 YLDDACRAFDEMDDRNVISWTSVISGLAKHG 414
>ref|XP_003568739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Brachypodium distachyon]
Length = 818
Score = 106 bits (264), Expect = 4e-21
Identities = 49/91 (53%), Positives = 64/91 (70%)
Frame = +1
Query: 31 QIQSMDMGXXXXXXXXXXXXXXXIGMLSKGQQLHAQLLKAGLRSDMGIGNSLISMYSRCG 210
+I+ MD G +G+L+KGQ+LHA +KAG RSD GI NSL+SMY+RCG
Sbjct: 436 KIEGMDDGVSTFTFASLLSAAASVGLLTKGQKLHALSMKAGFRSDQGISNSLVSMYARCG 495
Query: 211 SIDDACQAFGEMNDHNVISWTAMITGFAKQG 303
++DAC+AF EM DHNVISWT++I+G AK G
Sbjct: 496 YLEDACRAFDEMKDHNVISWTSIISGLAKHG 526
Score = 55.5 bits (132), Expect = 7e-06
Identities = 28/71 (39%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Frame = +1
Query: 100 IGMLSKGQQLHAQLLKAGLRSDMGIGNSLISMYSRCG---SIDDACQAFGEMNDHNVISW 270
+G + GQQLH+ L+ GL SD + L+ MY++ S++ A + F M HNV+SW
Sbjct: 259 LGSVRLGQQLHSVALRLGLVSDSCVSCGLVDMYAKLKMERSMEHARKVFKTMPRHNVMSW 318
Query: 271 TAMITGFAKQG 303
TA+I+G+ + G
Sbjct: 319 TALISGYVQSG 329
>ref|XP_006655097.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Oryza brachyantha]
Length = 819
Score = 105 bits (261), Expect = 8e-21
Identities = 50/92 (54%), Positives = 62/92 (67%)
Frame = +1
Query: 28 YQIQSMDMGXXXXXXXXXXXXXXXIGMLSKGQQLHAQLLKAGLRSDMGIGNSLISMYSRC 207
+QI MDMG +GML+KGQQLHA LKAG SD + NSL+SMYSRC
Sbjct: 436 HQIARMDMGISSSIFASLISAAASVGMLTKGQQLHAMSLKAGFGSDRFVSNSLVSMYSRC 495
Query: 208 GSIDDACQAFGEMNDHNVISWTAMITGFAKQG 303
G ++DAC++F E+ D NVISWT+MI+G AK G
Sbjct: 496 GYLEDACRSFNELKDRNVISWTSMISGLAKHG 527
Score = 56.2 bits (134), Expect = 4e-06
Identities = 29/71 (40%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
Frame = +1
Query: 100 IGMLSKGQQLHAQLLKAGLRSDMGIGNSLISMYSRC---GSIDDACQAFGEMNDHNVISW 270
+G +S GQQLH+ +L+ GL SD + L+ MY++ S++ A + F M H+VISW
Sbjct: 264 LGSVSLGQQLHSLVLRLGLASDGCVSCGLVDMYAKSHIKQSMEYANKVFERMPKHDVISW 323
Query: 271 TAMITGFAKQG 303
TA+I+G+ + G
Sbjct: 324 TALISGYVQCG 334
>ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|48475165|gb|AAT44234.1| unknown protein, contains PPR
repeat [Oryza sativa Japonica Group]
gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa
Japonica Group] gi|215695208|dbj|BAG90399.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|222630605|gb|EEE62737.1| hypothetical protein
OsJ_17540 [Oryza sativa Japonica Group]
Length = 822
Score = 103 bits (257), Expect = 2e-20
Identities = 49/92 (53%), Positives = 62/92 (67%)
Frame = +1
Query: 28 YQIQSMDMGXXXXXXXXXXXXXXXIGMLSKGQQLHAQLLKAGLRSDMGIGNSLISMYSRC 207
++I MDMG +GML+KGQQLHA LKAG SD + NSL+SMYSRC
Sbjct: 439 HRIGRMDMGISSSTFASLISAAASVGMLTKGQQLHAMTLKAGFGSDRFVSNSLVSMYSRC 498
Query: 208 GSIDDACQAFGEMNDHNVISWTAMITGFAKQG 303
G ++DAC++F E+ D NVISWT+MI+G AK G
Sbjct: 499 GYLEDACRSFNELKDRNVISWTSMISGLAKHG 530
>dbj|BAJ91074.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 823
Score = 102 bits (253), Expect = 7e-20
Identities = 50/92 (54%), Positives = 63/92 (68%), Gaps = 1/92 (1%)
Frame = +1
Query: 31 QIQSMDMGXXXXXXXXXXXXXXXIGMLSKGQQLHAQLLKAGLRSDMGIGNSLISMYSRCG 210
QI+SMD+G +G+ +KGQQLHA +K G SD GI NSL+SMYSRCG
Sbjct: 440 QIESMDVGVSTFTFASLLSAAATVGLPTKGQQLHALSIKTGFESDKGISNSLVSMYSRCG 499
Query: 211 SIDDACQAFGEM-NDHNVISWTAMITGFAKQG 303
+DDAC+AF EM +DHNVISWT++I+ AK G
Sbjct: 500 YLDDACRAFDEMEDDHNVISWTSIISALAKHG 531
>gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
Length = 822
Score = 101 bits (252), Expect = 9e-20
Identities = 48/92 (52%), Positives = 62/92 (67%)
Frame = +1
Query: 28 YQIQSMDMGXXXXXXXXXXXXXXXIGMLSKGQQLHAQLLKAGLRSDMGIGNSLISMYSRC 207
++I MD+G +GML+KGQQLHA LKAG SD + NSL+SMYSRC
Sbjct: 439 HRIVRMDVGISSSTFASLISAAASVGMLTKGQQLHAMSLKAGFGSDRFVSNSLVSMYSRC 498
Query: 208 GSIDDACQAFGEMNDHNVISWTAMITGFAKQG 303
G ++DAC++F E+ D NVISWT+MI+G AK G
Sbjct: 499 GYLEDACRSFNELKDRNVISWTSMISGLAKHG 530
>ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 99.4 bits (246), Expect = 4e-19
Identities = 46/101 (45%), Positives = 67/101 (66%)
Frame = +1
Query: 1 NYEQAIEVLYQIQSMDMGXXXXXXXXXXXXXXXIGMLSKGQQLHAQLLKAGLRSDMGIGN 180
N E+A+E+ +I+ MG IG + KG+Q+HA+++K+GL+ + + N
Sbjct: 457 NSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCN 516
Query: 181 SLISMYSRCGSIDDACQAFGEMNDHNVISWTAMITGFAKQG 303
+LISMYSRCG+I+ A Q F +M D NVISWT++ITGFAK G
Sbjct: 517 ALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHG 557
Score = 66.6 bits (161), Expect = 3e-09
Identities = 33/69 (47%), Positives = 48/69 (69%), Gaps = 3/69 (4%)
Frame = +1
Query: 106 MLSKGQQLHAQLLKAGLRSDMGIGNSLISMYSRC---GSIDDACQAFGEMNDHNVISWTA 276
+L GQQLH+Q ++ GL D +G LI+MY++C GS+ A + F ++ DHNV SWTA
Sbjct: 286 LLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTA 345
Query: 277 MITGFAKQG 303
MITG+ ++G
Sbjct: 346 MITGYVQKG 354
>ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 99.4 bits (246), Expect = 4e-19
Identities = 46/101 (45%), Positives = 67/101 (66%)
Frame = +1
Query: 1 NYEQAIEVLYQIQSMDMGXXXXXXXXXXXXXXXIGMLSKGQQLHAQLLKAGLRSDMGIGN 180
N E+A+E+ +I+ MG IG + KG+Q+HA+++K+GL+ + + N
Sbjct: 457 NSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCN 516
Query: 181 SLISMYSRCGSIDDACQAFGEMNDHNVISWTAMITGFAKQG 303
+LISMYSRCG+I+ A Q F +M D NVISWT++ITGFAK G
Sbjct: 517 ALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHG 557
Score = 66.6 bits (161), Expect = 3e-09
Identities = 33/69 (47%), Positives = 48/69 (69%), Gaps = 3/69 (4%)
Frame = +1
Query: 106 MLSKGQQLHAQLLKAGLRSDMGIGNSLISMYSRC---GSIDDACQAFGEMNDHNVISWTA 276
+L GQQLH+Q ++ GL D +G LI+MY++C GS+ A + F ++ DHNV SWTA
Sbjct: 286 LLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTA 345
Query: 277 MITGFAKQG 303
MITG+ ++G
Sbjct: 346 MITGYVQKG 354
>ref|XP_002321443.2| hypothetical protein POPTR_0015s02060g [Populus trichocarpa]
gi|550321785|gb|EEF05570.2| hypothetical protein
POPTR_0015s02060g [Populus trichocarpa]
Length = 931
Score = 99.0 bits (245), Expect = 6e-19
Identities = 48/101 (47%), Positives = 66/101 (65%)
Frame = +1
Query: 1 NYEQAIEVLYQIQSMDMGXXXXXXXXXXXXXXXIGMLSKGQQLHAQLLKAGLRSDMGIGN 180
N E+A E+ +I+ G IG + KG+Q+H+++LK+G +S++ I N
Sbjct: 539 NSEEAFELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICN 598
Query: 181 SLISMYSRCGSIDDACQAFGEMNDHNVISWTAMITGFAKQG 303
+LISMYSRCG+I+ A Q F EM D NVISWT+MITGFAK G
Sbjct: 599 ALISMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAKHG 639
Score = 73.9 bits (180), Expect = 2e-11
Identities = 34/71 (47%), Positives = 51/71 (71%), Gaps = 3/71 (4%)
Frame = +1
Query: 100 IGMLSKGQQLHAQLLKAGLRSDMGIGNSLISMYSRC---GSIDDACQAFGEMNDHNVISW 270
+G+LS G+Q H ++K+GL D+ +G SL+ MY++C GS+DDA + F M HNV+SW
Sbjct: 366 MGLLSLGRQFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSW 425
Query: 271 TAMITGFAKQG 303
TA+ITG+ + G
Sbjct: 426 TAIITGYVQSG 436
Score = 56.2 bits (134), Expect = 4e-06
Identities = 25/60 (41%), Positives = 44/60 (73%)
Frame = +1
Query: 118 GQQLHAQLLKAGLRSDMGIGNSLISMYSRCGSIDDACQAFGEMNDHNVISWTAMITGFAK 297
G+Q++A ++K L S +GNSLISMYSRCG++++A +AF + + N++S+ ++ +AK
Sbjct: 477 GEQVYALVVKMRLASINCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAK 536
>ref|XP_006290593.1| hypothetical protein CARUB_v10016682mg [Capsella rubella]
gi|482559300|gb|EOA23491.1| hypothetical protein
CARUB_v10016682mg [Capsella rubella]
Length = 850
Score = 99.0 bits (245), Expect = 6e-19
Identities = 48/101 (47%), Positives = 65/101 (64%)
Frame = +1
Query: 1 NYEQAIEVLYQIQSMDMGXXXXXXXXXXXXXXXIGMLSKGQQLHAQLLKAGLRSDMGIGN 180
++EQA E+L +I ++G +G + KG+Q+H+Q+LK GL + + N
Sbjct: 454 DFEQAFELLNEITERELGVSAFTFASLLTGVASVGSIRKGEQIHSQVLKLGLACNQPVCN 513
Query: 181 SLISMYSRCGSIDDACQAFGEMNDHNVISWTAMITGFAKQG 303
+LISMYS+CGSID A Q F M D NVISWT+MITGFAK G
Sbjct: 514 ALISMYSKCGSIDTASQVFKLMEDRNVISWTSMITGFAKHG 554
Score = 57.8 bits (138), Expect = 1e-06
Identities = 28/64 (43%), Positives = 43/64 (67%), Gaps = 3/64 (4%)
Frame = +1
Query: 109 LSKGQQLHAQLLKAGLRSDMGIGNSLISMYSRCG---SIDDACQAFGEMNDHNVISWTAM 279
LS G+QLH+ +++GL D+ SL+ MY++C S+DD + F M H+V+SWTA+
Sbjct: 285 LSLGKQLHSWAIRSGLADDVEC--SLVDMYAKCSVDSSVDDCRKVFDRMQHHSVMSWTAL 342
Query: 280 ITGF 291
ITG+
Sbjct: 343 ITGY 346
>ref|XP_006422178.1| hypothetical protein CICLE_v10006927mg [Citrus clementina]
gi|568874825|ref|XP_006490514.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Citrus sinensis]
gi|557524051|gb|ESR35418.1| hypothetical protein
CICLE_v10006927mg [Citrus clementina]
Length = 861
Score = 97.4 bits (241), Expect = 2e-18
Identities = 47/101 (46%), Positives = 66/101 (65%)
Frame = +1
Query: 1 NYEQAIEVLYQIQSMDMGXXXXXXXXXXXXXXXIGMLSKGQQLHAQLLKAGLRSDMGIGN 180
N E+A E+L++I+ +G IG + KG+Q+HA+++K+G S+ I N
Sbjct: 469 NSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYN 528
Query: 181 SLISMYSRCGSIDDACQAFGEMNDHNVISWTAMITGFAKQG 303
+LISMYSRC +++ A Q F EM D NVISWT+MITGFAK G
Sbjct: 529 ALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHG 569
Score = 71.2 bits (173), Expect = 1e-10
Identities = 31/69 (44%), Positives = 49/69 (71%), Gaps = 3/69 (4%)
Frame = +1
Query: 106 MLSKGQQLHAQLLKAGLRSDMGIGNSLISMYSRC---GSIDDACQAFGEMNDHNVISWTA 276
+ + G+QLH+ ++ GL D+ +G SL+ MY++C GS+DD+ + F M DHNV+SWTA
Sbjct: 298 LFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTA 357
Query: 277 MITGFAKQG 303
+ITG+ + G
Sbjct: 358 IITGYVQSG 366
>ref|XP_006404168.1| hypothetical protein EUTSA_v10010119mg [Eutrema salsugineum]
gi|557105287|gb|ESQ45621.1| hypothetical protein
EUTSA_v10010119mg [Eutrema salsugineum]
Length = 850
Score = 97.1 bits (240), Expect = 2e-18
Identities = 47/101 (46%), Positives = 63/101 (62%)
Frame = +1
Query: 1 NYEQAIEVLYQIQSMDMGXXXXXXXXXXXXXXXIGMLSKGQQLHAQLLKAGLRSDMGIGN 180
++E+A E+ +I +G IG + KG+Q+H+Q+LK GL + + N
Sbjct: 454 DFEEAFELFNEITERGLGVSAFTFASLLSGVASIGSIRKGEQIHSQVLKLGLSCNQPVSN 513
Query: 181 SLISMYSRCGSIDDACQAFGEMNDHNVISWTAMITGFAKQG 303
+LISMYSRCGSID A + F M D NVISWT+MITGFAK G
Sbjct: 514 ALISMYSRCGSIDTASRVFNLMEDRNVISWTSMITGFAKHG 554
Score = 61.6 bits (148), Expect = 1e-07
Identities = 29/64 (45%), Positives = 45/64 (70%), Gaps = 3/64 (4%)
Frame = +1
Query: 109 LSKGQQLHAQLLKAGLRSDMGIGNSLISMYSRCG---SIDDACQAFGEMNDHNVISWTAM 279
LS G+QLH+ +++GL D+G SL+ MY++C S+DD + F + DH+V+SWTA+
Sbjct: 285 LSLGKQLHSWAIRSGLADDVGC--SLVDMYAKCSVDDSLDDCRKVFDRIQDHSVMSWTAL 342
Query: 280 ITGF 291
ITG+
Sbjct: 343 ITGY 346
>gb|EMJ18239.1| hypothetical protein PRUPE_ppa001611mg [Prunus persica]
Length = 793
Score = 95.5 bits (236), Expect = 6e-18
Identities = 46/99 (46%), Positives = 62/99 (62%)
Frame = +1
Query: 7 EQAIEVLYQIQSMDMGXXXXXXXXXXXXXXXIGMLSKGQQLHAQLLKAGLRSDMGIGNSL 186
E+A + ++IQ G I + KG+Q+HA+++K+G S+ GI N+L
Sbjct: 403 EEAFGIFHEIQDTGFGASAFTFSSLLSGAASICAVGKGEQIHARIIKSGFESNQGICNAL 462
Query: 187 ISMYSRCGSIDDACQAFGEMNDHNVISWTAMITGFAKQG 303
+SMYSRCG+ID A F EM D NVISWT+MITGFAK G
Sbjct: 463 VSMYSRCGNIDAAFAVFNEMEDWNVISWTSMITGFAKHG 501
Score = 65.5 bits (158), Expect = 7e-09
Identities = 30/68 (44%), Positives = 47/68 (69%), Gaps = 3/68 (4%)
Frame = +1
Query: 109 LSKGQQLHAQLLKAGLRSDMGIGNSLISMYSRC---GSIDDACQAFGEMNDHNVISWTAM 279
LS GQQLH+ ++++GL +G L+ MY++C GS+DDA + F M +HNV+SWT++
Sbjct: 231 LSLGQQLHSWVIRSGLALGHCVGCCLVDMYAKCAADGSMDDARKVFDRMPNHNVLSWTSI 290
Query: 280 ITGFAKQG 303
I G+ + G
Sbjct: 291 INGYVQSG 298
Score = 60.5 bits (145), Expect = 2e-07
Identities = 29/63 (46%), Positives = 43/63 (68%)
Frame = +1
Query: 109 LSKGQQLHAQLLKAGLRSDMGIGNSLISMYSRCGSIDDACQAFGEMNDHNVISWTAMITG 288
L KG Q+H+ +K GL S +GNSLISMYSR G ++DA +AF + + N+IS+ ++
Sbjct: 336 LRKGDQVHSLAVKLGLASVNCVGNSLISMYSRSGQVEDARKAFDILYEKNLISYNTIVDA 395
Query: 289 FAK 297
+AK
Sbjct: 396 YAK 398
>ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata] gi|297323492|gb|EFH53913.1| hypothetical protein
ARALYDRAFT_323502 [Arabidopsis lyrata subsp. lyrata]
Length = 1112
Score = 95.5 bits (236), Expect = 6e-18
Identities = 46/101 (45%), Positives = 65/101 (64%)
Frame = +1
Query: 1 NYEQAIEVLYQIQSMDMGXXXXXXXXXXXXXXXIGMLSKGQQLHAQLLKAGLRSDMGIGN 180
++E A E+L +I ++G +G L KG+Q+H+Q+LK GL + + N
Sbjct: 454 DFEHAFELLSEIAERELGVSAFTFASLLSGVANVGSLRKGEQIHSQVLKLGLSCNQPVCN 513
Query: 181 SLISMYSRCGSIDDACQAFGEMNDHNVISWTAMITGFAKQG 303
+LISMYS+CGSID A + F M++ NVISWT+MITGFAK G
Sbjct: 514 ALISMYSKCGSIDTASRVFSLMDNRNVISWTSMITGFAKHG 554
Score = 62.8 bits (151), Expect = 5e-08
Identities = 30/64 (46%), Positives = 45/64 (70%), Gaps = 3/64 (4%)
Frame = +1
Query: 109 LSKGQQLHAQLLKAGLRSDMGIGNSLISMYSRC---GSIDDACQAFGEMNDHNVISWTAM 279
LS G+QLH+ +++GL D+ SL+ MY++C GS+DD + F M DH+V+SWTA+
Sbjct: 285 LSLGRQLHSWAIRSGLADDVEC--SLVDMYAKCSADGSVDDCRKVFDRMQDHSVMSWTAL 342
Query: 280 ITGF 291
ITG+
Sbjct: 343 ITGY 346
>ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2261; Flags: Precursor
gi|58013018|gb|AAW62962.1| embryo-defective 2261
[Arabidopsis thaliana] gi|58013020|gb|AAW62963.1|
embryo-defective 2261 [Arabidopsis thaliana]
gi|332644986|gb|AEE78507.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 95.5 bits (236), Expect = 6e-18
Identities = 45/101 (44%), Positives = 65/101 (64%)
Frame = +1
Query: 1 NYEQAIEVLYQIQSMDMGXXXXXXXXXXXXXXXIGMLSKGQQLHAQLLKAGLRSDMGIGN 180
N+EQA ++L +I ++G +G + KG+Q+H+Q++K GL + + N
Sbjct: 454 NFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCN 513
Query: 181 SLISMYSRCGSIDDACQAFGEMNDHNVISWTAMITGFAKQG 303
+LISMYS+CGSID A + F M + NVISWT+MITGFAK G
Sbjct: 514 ALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHG 554
Score = 63.5 bits (153), Expect = 3e-08
Identities = 31/66 (46%), Positives = 46/66 (69%), Gaps = 3/66 (4%)
Frame = +1
Query: 109 LSKGQQLHAQLLKAGLRSDMGIGNSLISMYSRC---GSIDDACQAFGEMNDHNVISWTAM 279
LS G+QLH+ +++GL D+ SL+ MY++C GS+DD + F M DH+V+SWTA+
Sbjct: 285 LSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTAL 342
Query: 280 ITGFAK 297
ITG+ K
Sbjct: 343 ITGYMK 348
>emb|CAB66396.1| putative protein [Arabidopsis thaliana]
Length = 1113
Score = 95.5 bits (236), Expect = 6e-18
Identities = 45/101 (44%), Positives = 65/101 (64%)
Frame = +1
Query: 1 NYEQAIEVLYQIQSMDMGXXXXXXXXXXXXXXXIGMLSKGQQLHAQLLKAGLRSDMGIGN 180
N+EQA ++L +I ++G +G + KG+Q+H+Q++K GL + + N
Sbjct: 454 NFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCN 513
Query: 181 SLISMYSRCGSIDDACQAFGEMNDHNVISWTAMITGFAKQG 303
+LISMYS+CGSID A + F M + NVISWT+MITGFAK G
Sbjct: 514 ALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHG 554
Score = 63.5 bits (153), Expect = 3e-08
Identities = 31/66 (46%), Positives = 46/66 (69%), Gaps = 3/66 (4%)
Frame = +1
Query: 109 LSKGQQLHAQLLKAGLRSDMGIGNSLISMYSRC---GSIDDACQAFGEMNDHNVISWTAM 279
LS G+QLH+ +++GL D+ SL+ MY++C GS+DD + F M DH+V+SWTA+
Sbjct: 285 LSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTAL 342
Query: 280 ITGFAK 297
ITG+ K
Sbjct: 343 ITGYMK 348
>ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 93.2 bits (230), Expect = 3e-17
Identities = 47/99 (47%), Positives = 61/99 (61%)
Frame = +1
Query: 7 EQAIEVLYQIQSMDMGXXXXXXXXXXXXXXXIGMLSKGQQLHAQLLKAGLRSDMGIGNSL 186
E+A + +I +G IG + KG+Q+H +LLK G +S+ I N+L
Sbjct: 419 EEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNAL 478
Query: 187 ISMYSRCGSIDDACQAFGEMNDHNVISWTAMITGFAKQG 303
ISMYSRCG+I+ A Q F EM D NVISWT+MITGFAK G
Sbjct: 479 ISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHG 517
Score = 73.6 bits (179), Expect = 3e-11
Identities = 31/71 (43%), Positives = 54/71 (76%), Gaps = 3/71 (4%)
Frame = +1
Query: 100 IGMLSKGQQLHAQLLKAGLRSDMGIGNSLISMYSRC---GSIDDACQAFGEMNDHNVISW 270
+G+L+ G+QLH+++++ GL D+ +G SL+ MY++C GS+DD+ + F +M +HNV+SW
Sbjct: 244 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 303
Query: 271 TAMITGFAKQG 303
TA+IT + + G
Sbjct: 304 TAIITAYVQSG 314
Score = 56.2 bits (134), Expect = 4e-06
Identities = 25/60 (41%), Positives = 44/60 (73%)
Frame = +1
Query: 118 GQQLHAQLLKAGLRSDMGIGNSLISMYSRCGSIDDACQAFGEMNDHNVISWTAMITGFAK 297
G+Q+++ +K G+ S +GNSLISMY+R G ++DA +AF + + N++S+ A++ G+AK
Sbjct: 355 GEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAK 414