BLASTX nr result

ID: Zingiber24_contig00047584 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00047584
         (329 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW61141.1| hypothetical protein ZEAMMB73_943069, partial [Ze...    60   2e-07
ref|XP_003573445.1| PREDICTED: uncharacterized protein LOC100831...    57   3e-06
ref|XP_002443913.1| hypothetical protein SORBIDRAFT_07g004250 [S...    55   1e-05

>gb|AFW61141.1| hypothetical protein ZEAMMB73_943069, partial [Zea mays]
          Length = 185

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 34/105 (32%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
 Frame = -1

Query: 329 AEVGPSPVVPFLLVAALAMFICREDLRNGYDYVSGVQDKTVLFLVILP------MIGFFA 168
           A  GPSPVVP L+VAAL   IC+E L   Y+ V+ VQ+      V+L       ++    
Sbjct: 15  ASRGPSPVVPLLVVAALGWVICQETLMGWYEQVTEVQETVADNAVLLVLGAGVLLLALAV 74

Query: 167 MQSSTEKIVIPIAFCTVVFLLRTQLLGPIVVLVLIHLLSKWYCPP 33
             + +E +++P A   V+FL++  +L  +++LV+++    +Y  P
Sbjct: 75  AGNRSEVVLVPAALVLVMFLIQNIVLAALLLLVVVYFAGIYYYRP 119


>ref|XP_003573445.1| PREDICTED: uncharacterized protein LOC100831148 [Brachypodium
           distachyon]
          Length = 191

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 31/105 (29%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
 Frame = -1

Query: 329 AEVGPSPVVPFLLVAALAMFICREDLRNGYDYVSGVQDKTV--LFLVILP----MIGFFA 168
           A  GPSP+VP ++V AL   IC E L   Y+ V+ VQ+      F++IL     ++    
Sbjct: 16  ARHGPSPMVPLMVVLALGWVICNETLMGWYEQVTEVQETVTENSFVLILTAGFLLVAIVI 75

Query: 167 MQSSTEKIVIPIAFCTVVFLLRTQLLGPIVVLVLIHLLSKWYCPP 33
           + S  E +++P     V+ L++  +L  +++L+ ++    +Y PP
Sbjct: 76  LSSRMEVVLVPAVLVLVMLLIQNIVLAVLLLLLALYFAGIYYSPP 120


>ref|XP_002443913.1| hypothetical protein SORBIDRAFT_07g004250 [Sorghum bicolor]
           gi|241940263|gb|EES13408.1| hypothetical protein
           SORBIDRAFT_07g004250 [Sorghum bicolor]
          Length = 196

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 8/107 (7%)
 Frame = -1

Query: 329 AEVGPSPVVPFLLVAALAMFICREDLRNGYDYVS----GVQDKTVLFLVILP----MIGF 174
           A  GPSPVVP L+V AL   IC+E L   Y+ V+     V D  VL ++ L     ++  
Sbjct: 15  ASRGPSPVVPLLVVMALGWVICQETLMEWYETVTELEETVTDNAVLVVLALGAAALLLAL 74

Query: 173 FAMQSSTEKIVIPIAFCTVVFLLRTQLLGPIVVLVLIHLLSKWYCPP 33
               + +E +++P+    V+ L++  +L  +++LVL++    +Y  P
Sbjct: 75  AVAGNRSEVVLVPVVLVAVMLLIQNIVLTALLLLVLVYFAGIYYYRP 121


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