BLASTX nr result

ID: Zingiber24_contig00047558 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00047558
         (292 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006369502.1| hypothetical protein POPTR_0001s24040g [Popu...    55   9e-06

>ref|XP_006369502.1| hypothetical protein POPTR_0001s24040g [Populus trichocarpa]
            gi|566150688|ref|XP_002298386.2| hypothetical protein
            POPTR_0001s24040g [Populus trichocarpa]
            gi|550348052|gb|ERP66071.1| hypothetical protein
            POPTR_0001s24040g [Populus trichocarpa]
            gi|550348053|gb|EEE83191.2| hypothetical protein
            POPTR_0001s24040g [Populus trichocarpa]
          Length = 1416

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 37/105 (35%), Positives = 51/105 (48%), Gaps = 9/105 (8%)
 Frame = +3

Query: 3    KRQRKDSLDQSDIGAV---------NDVDXXXXXXXXXXXXXDDDHDLMVLTSPIRAAAE 155
            KRQ+KD  DQSD G V                          DDD    ++ S +R  AE
Sbjct: 1292 KRQKKDPADQSDQGTVTVAFHGTGDQSGFDLGSDLNAEPLAADDDKRTDLVCSDVRHNAE 1351

Query: 156  DAGLNIDNANAFIDSTTITKDRGNWEGLALNPLRQDRLICQENST 290
            D   NID ++     +T   D   W+ L+LNPL+++++ICQENST
Sbjct: 1352 D---NIDTSHGPKQGSTYDGDAMVWDALSLNPLQENKVICQENST 1393


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