BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00047512
         (662 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006650883.1| PREDICTED: pentatricopeptide repeat-containi...   130   4e-28
gb|EEC76511.1| hypothetical protein OsI_14286 [Oryza sativa Indi...   129   6e-28
ref|XP_004981076.1| PREDICTED: pentatricopeptide repeat-containi...   127   2e-27
ref|XP_004981075.1| PREDICTED: pentatricopeptide repeat-containi...   127   2e-27
gb|EEE60281.1| hypothetical protein OsJ_13335 [Oryza sativa Japo...   125   1e-26
ref|NP_001051869.1| Os03g0844000 [Oryza sativa Japonica Group] g...   125   1e-26
gb|AFW67004.1| putative pentatricopeptide repeat family protein ...   125   1e-26
gb|AFW67003.1| putative pentatricopeptide repeat family protein ...   125   1e-26
ref|XP_002466113.1| hypothetical protein SORBIDRAFT_01g001570 [S...   123   6e-26
ref|XP_003559158.1| PREDICTED: pentatricopeptide repeat-containi...   120   3e-25
ref|XP_002466114.1| hypothetical protein SORBIDRAFT_01g001585 [S...   115   9e-24
dbj|BAJ88475.1| predicted protein [Hordeum vulgare subsp. vulgare]    111   2e-22
dbj|BAJ89568.1| predicted protein [Hordeum vulgare subsp. vulgare]    111   2e-22
gb|ABF99847.1| pentatricopeptide, putative, expressed [Oryza sat...   107   3e-21
emb|CBI21510.3| unnamed protein product [Vitis vinifera]              103   5e-20
ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containi...   100   5e-19
ref|XP_006297059.1| hypothetical protein CARUB_v10013060mg [Caps...    96   1e-17
ref|XP_002867987.1| binding protein [Arabidopsis lyrata subsp. l...    96   1e-17
ref|XP_002516589.1| pentatricopeptide repeat-containing protein,...    96   1e-17
ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat...    96   1e-17

>ref|XP_006650883.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Oryza brachyantha]
          Length = 709

 Score =  130 bits (327), Expect = 4e-28
 Identities = 63/115 (54%), Positives = 80/115 (69%)
 Frame = +2

Query: 317 VVLESMLIDLLMKSERPDDAFRVFDEMPQRNVVTWTSMISGCVRNGFGKTGIYLFVQMLE 496
           VVLE   +D L+KS R  DA  +FD MP++NVV WTS++SGC RNG  +  + +F  M+E
Sbjct: 47  VVLECKRLDRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGCTRNGRPEEALAMFADMVE 106

Query: 497 SGVLSNDFAVNAAIQACTDVAALRCGEQLHSLILRSGFTEDCWSSISLIDFYSRC 661
           SGV  NDFA NAA+ AC D+ ALR GEQ+HSL +R+GF  D W    LI+ YSRC
Sbjct: 107 SGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGGCLIEMYSRC 161



 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 34/93 (36%), Positives = 53/93 (56%)
 Frame = +2

Query: 383 VFDEMPQRNVVTWTSMISGCVRNGFGKTGIYLFVQMLESGVLSNDFAVNAAIQACTDVAA 562
           V +++   + V+WT+ IS   +NGFG   I L  QM   G   ND+A ++ + +C D+A+
Sbjct: 367 VLNKIENPDHVSWTTAISANFQNGFGDKAIALLCQMHSEGFTPNDYAFSSVLSSCADLAS 426

Query: 563 LRCGEQLHSLILRSGFTEDCWSSISLIDFYSRC 661
           L  G QLH L L+ G      +  +LI+ YS+C
Sbjct: 427 LDQGMQLHCLALKLGCDSKICTGNALINMYSKC 459


>gb|EEC76511.1| hypothetical protein OsI_14286 [Oryza sativa Indica Group]
          Length = 656

 Score =  129 bits (325), Expect = 6e-28
 Identities = 62/115 (53%), Positives = 80/115 (69%)
 Frame = +2

Query: 317 VVLESMLIDLLMKSERPDDAFRVFDEMPQRNVVTWTSMISGCVRNGFGKTGIYLFVQMLE 496
           VVLE   ++ L+KS R  DA  +FD MP++NVV WTS++SGC RNG  +  + +F  M+E
Sbjct: 48  VVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGCTRNGRPEAALAMFADMVE 107

Query: 497 SGVLSNDFAVNAAIQACTDVAALRCGEQLHSLILRSGFTEDCWSSISLIDFYSRC 661
           SGV  NDFA NAA+ AC D+ ALR GEQ+HSL +R+GF  D W    LI+ YSRC
Sbjct: 108 SGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRC 162



 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 41/133 (30%), Positives = 67/133 (50%), Gaps = 4/133 (3%)
 Frame = +2

Query: 275 DLFLDMKIQGIKVGVVLESMLID----LLMKSERPDDAFRVFDEMPQRNVVTWTSMISGC 442
           DL  D+++    + +   + L++    +L K E PD             +V+WT+ IS  
Sbjct: 295 DLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPD-------------LVSWTTAISAN 341

Query: 443 VRNGFGKTGIYLFVQMLESGVLSNDFAVNAAIQACTDVAALRCGEQLHSLILRSGFTEDC 622
            +NGFG+  I L  QM   G   N +A ++ + +C DVA+L  G Q H L L+ G   + 
Sbjct: 342 FQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEI 401

Query: 623 WSSISLIDFYSRC 661
            +  +LI+ YS+C
Sbjct: 402 CTGNALINMYSKC 414



 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 40/112 (35%), Positives = 60/112 (53%), Gaps = 2/112 (1%)
 Frame = +2

Query: 329 SMLIDLLMKSERPDDAFRVFDEMPQRNVVTWTSMISGCVRNGFGKTGIYLFVQMLESGVL 508
           S LI++  +      A  VFD M   +VV +TS+IS   RNG  +      +QML+ G+ 
Sbjct: 153 SCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLK 212

Query: 509 SNDFAVNAAIQACTDVAALRCGEQLHS-LILRSGF-TEDCWSSISLIDFYSR 658
            N+  +   + AC  V     G+Q+H  LI + G  ++  +SS +LIDFYSR
Sbjct: 213 PNEHTMTTILTACPRV----LGQQIHGYLIKKIGLRSQSVYSSTALIDFYSR 260


>ref|XP_004981076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like isoform X2 [Setaria italica]
          Length = 681

 Score =  127 bits (320), Expect = 2e-27
 Identities = 63/116 (54%), Positives = 76/116 (65%)
 Frame = +2

Query: 314 GVVLESMLIDLLMKSERPDDAFRVFDEMPQRNVVTWTSMISGCVRNGFGKTGIYLFVQML 493
           GVVL+   +D LMKS R  DA  +FD MP++NVV WTS ISGC RNG  +    +F  ML
Sbjct: 32  GVVLDCKRLDSLMKSGRLTDALDLFDRMPRKNVVAWTSAISGCTRNGRPEAAAAMFADML 91

Query: 494 ESGVLSNDFAVNAAIQACTDVAALRCGEQLHSLILRSGFTEDCWSSISLIDFYSRC 661
            SGV +NDFA NAA+ AC    AL  GEQ+HSL +R+GF  D W    LI+ YSRC
Sbjct: 92  ASGVATNDFACNAALAACAAAGALGLGEQVHSLAVRAGFAGDAWIGTCLIELYSRC 147



 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 33/113 (29%), Positives = 60/113 (53%)
 Frame = +2

Query: 323 LESMLIDLLMKSERPDDAFRVFDEMPQRNVVTWTSMISGCVRNGFGKTGIYLFVQMLESG 502
           + + L+ +  +S   ++   V D +   ++V+WT+ IS   +NGFG+  + L  +M   G
Sbjct: 331 VSNALLSMYGRSGLTEELEAVLDHIENPDLVSWTAAISANFQNGFGEKAVALLSKMHSQG 390

Query: 503 VLSNDFAVNAAIQACTDVAALRCGEQLHSLILRSGFTEDCWSSISLIDFYSRC 661
              ND+  ++ + +C D+A L  G Q H L L+ G      +  +LI+ YS+C
Sbjct: 391 FAPNDYTFSSGLSSCADLALLDQGRQFHCLALKLGCDSKICTGNALINMYSKC 443



 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 39/123 (31%), Positives = 64/123 (52%)
 Frame = +2

Query: 290 MKIQGIKVGVVLESMLIDLLMKSERPDDAFRVFDEMPQRNVVTWTSMISGCVRNGFGKTG 469
           +K  G++  V   S LIDL  ++   D A  VF ++  +NVV+W SM+  C R+G  +  
Sbjct: 223 VKAMGLQ-SVYASSALIDLYSRNGDCDMARSVFQKLDSKNVVSWCSMMQLCSRDGRLEDA 281

Query: 470 IYLFVQMLESGVLSNDFAVNAAIQACTDVAALRCGEQLHSLILRSGFTEDCWSSISLIDF 649
           + +F +M+  GV  N+FA + A+ AC    +   G Q+H   ++     D   S +L+  
Sbjct: 282 LRVFSEMVSEGVEPNEFAFSIALGAC---GSADLGRQIHCSAIKHNLMTDIRVSNALLSM 338

Query: 650 YSR 658
           Y R
Sbjct: 339 YGR 341


>ref|XP_004981075.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like isoform X1 [Setaria italica]
          Length = 683

 Score =  127 bits (320), Expect = 2e-27
 Identities = 63/116 (54%), Positives = 76/116 (65%)
 Frame = +2

Query: 314 GVVLESMLIDLLMKSERPDDAFRVFDEMPQRNVVTWTSMISGCVRNGFGKTGIYLFVQML 493
           GVVL+   +D LMKS R  DA  +FD MP++NVV WTS ISGC RNG  +    +F  ML
Sbjct: 32  GVVLDCKRLDSLMKSGRLTDALDLFDRMPRKNVVAWTSAISGCTRNGRPEAAAAMFADML 91

Query: 494 ESGVLSNDFAVNAAIQACTDVAALRCGEQLHSLILRSGFTEDCWSSISLIDFYSRC 661
            SGV +NDFA NAA+ AC    AL  GEQ+HSL +R+GF  D W    LI+ YSRC
Sbjct: 92  ASGVATNDFACNAALAACAAAGALGLGEQVHSLAVRAGFAGDAWIGTCLIELYSRC 147



 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 33/113 (29%), Positives = 60/113 (53%)
 Frame = +2

Query: 323 LESMLIDLLMKSERPDDAFRVFDEMPQRNVVTWTSMISGCVRNGFGKTGIYLFVQMLESG 502
           + + L+ +  +S   ++   V D +   ++V+WT+ IS   +NGFG+  + L  +M   G
Sbjct: 331 VSNALLSMYGRSGLTEELEAVLDHIENPDLVSWTAAISANFQNGFGEKAVALLSKMHSQG 390

Query: 503 VLSNDFAVNAAIQACTDVAALRCGEQLHSLILRSGFTEDCWSSISLIDFYSRC 661
              ND+  ++ + +C D+A L  G Q H L L+ G      +  +LI+ YS+C
Sbjct: 391 FAPNDYTFSSGLSSCADLALLDQGRQFHCLALKLGCDSKICTGNALINMYSKC 443



 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 39/123 (31%), Positives = 64/123 (52%)
 Frame = +2

Query: 290 MKIQGIKVGVVLESMLIDLLMKSERPDDAFRVFDEMPQRNVVTWTSMISGCVRNGFGKTG 469
           +K  G++  V   S LIDL  ++   D A  VF ++  +NVV+W SM+  C R+G  +  
Sbjct: 223 VKAMGLQ-SVYASSALIDLYSRNGDCDMARSVFQKLDSKNVVSWCSMMQLCSRDGRLEDA 281

Query: 470 IYLFVQMLESGVLSNDFAVNAAIQACTDVAALRCGEQLHSLILRSGFTEDCWSSISLIDF 649
           + +F +M+  GV  N+FA + A+ AC    +   G Q+H   ++     D   S +L+  
Sbjct: 282 LRVFSEMVSEGVEPNEFAFSIALGAC---GSADLGRQIHCSAIKHNLMTDIRVSNALLSM 338

Query: 650 YSR 658
           Y R
Sbjct: 339 YGR 341


>gb|EEE60281.1| hypothetical protein OsJ_13335 [Oryza sativa Japonica Group]
          Length = 1135

 Score =  125 bits (314), Expect = 1e-26
 Identities = 61/115 (53%), Positives = 79/115 (68%)
 Frame = +2

Query: 317 VVLESMLIDLLMKSERPDDAFRVFDEMPQRNVVTWTSMISGCVRNGFGKTGIYLFVQMLE 496
           VVLE   ++ L+KS R  DA  +FD MP++NVV WTS++SG  RNG  +  + +F  M+E
Sbjct: 48  VVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVE 107

Query: 497 SGVLSNDFAVNAAIQACTDVAALRCGEQLHSLILRSGFTEDCWSSISLIDFYSRC 661
           SGV  NDFA NAA+ AC D+ ALR GEQ+HSL +R+GF  D W    LI+ YSRC
Sbjct: 108 SGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRC 162



 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 41/133 (30%), Positives = 67/133 (50%), Gaps = 4/133 (3%)
 Frame = +2

Query: 275 DLFLDMKIQGIKVGVVLESMLID----LLMKSERPDDAFRVFDEMPQRNVVTWTSMISGC 442
           DL  D+++    + +   + L++    +L K E PD             +V+WT+ IS  
Sbjct: 341 DLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPD-------------LVSWTTAISAN 387

Query: 443 VRNGFGKTGIYLFVQMLESGVLSNDFAVNAAIQACTDVAALRCGEQLHSLILRSGFTEDC 622
            +NGFG+  I L  QM   G   N +A ++ + +C DVA+L  G Q H L L+ G   + 
Sbjct: 388 FQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEI 447

Query: 623 WSSISLIDFYSRC 661
            +  +LI+ YS+C
Sbjct: 448 CTGNALINMYSKC 460



 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 40/112 (35%), Positives = 60/112 (53%), Gaps = 2/112 (1%)
 Frame = +2

Query: 329 SMLIDLLMKSERPDDAFRVFDEMPQRNVVTWTSMISGCVRNGFGKTGIYLFVQMLESGVL 508
           S LI++  +      A  VFD M   +VV +TS+IS   RNG  +      +QML+ G+ 
Sbjct: 153 SCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLK 212

Query: 509 SNDFAVNAAIQACTDVAALRCGEQLHS-LILRSGF-TEDCWSSISLIDFYSR 658
            N+  +   + AC  V     G+Q+H  LI + G  ++  +SS +LIDFYSR
Sbjct: 213 PNEHTMTTILTACPRV----LGQQIHGYLIKKIGLRSQSVYSSTALIDFYSR 260



 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 38/135 (28%), Positives = 66/135 (48%)
 Frame = +2

Query: 254 KMLPEAMDLFLDMKIQGIKVGVVLESMLIDLLMKSERPDDAFRVFDEMPQRNVVTWTSMI 433
           ++L + +  +L  KI      V   + LID   ++     A  VFD +  +NVV+W SM+
Sbjct: 227 RVLGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMM 286

Query: 434 SGCVRNGFGKTGIYLFVQMLESGVLSNDFAVNAAIQACTDVAALRCGEQLHSLILRSGFT 613
              +R+G  +  + +F  M+  GV  N+FA++  + AC    ++  G QLH   ++    
Sbjct: 287 QLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGAC---GSIGLGRQLHCSAIKHDLI 343

Query: 614 EDCWSSISLIDFYSR 658
            D   S +L+  Y R
Sbjct: 344 TDIRVSNALLSMYGR 358


>ref|NP_001051869.1| Os03g0844000 [Oryza sativa Japonica Group]
           gi|41469627|gb|AAS07350.1| putative pentatricopeptide
           repeat domain contianing protein [Oryza sativa Japonica
           Group] gi|113550340|dbj|BAF13783.1| Os03g0844000 [Oryza
           sativa Japonica Group] gi|215686748|dbj|BAG89598.1|
           unnamed protein product [Oryza sativa Japonica Group]
          Length = 702

 Score =  125 bits (314), Expect = 1e-26
 Identities = 61/115 (53%), Positives = 79/115 (68%)
 Frame = +2

Query: 317 VVLESMLIDLLMKSERPDDAFRVFDEMPQRNVVTWTSMISGCVRNGFGKTGIYLFVQMLE 496
           VVLE   ++ L+KS R  DA  +FD MP++NVV WTS++SG  RNG  +  + +F  M+E
Sbjct: 48  VVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVE 107

Query: 497 SGVLSNDFAVNAAIQACTDVAALRCGEQLHSLILRSGFTEDCWSSISLIDFYSRC 661
           SGV  NDFA NAA+ AC D+ ALR GEQ+HSL +R+GF  D W    LI+ YSRC
Sbjct: 108 SGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRC 162



 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 41/133 (30%), Positives = 67/133 (50%), Gaps = 4/133 (3%)
 Frame = +2

Query: 275 DLFLDMKIQGIKVGVVLESMLID----LLMKSERPDDAFRVFDEMPQRNVVTWTSMISGC 442
           DL  D+++    + +   + L++    +L K E PD             +V+WT+ IS  
Sbjct: 341 DLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPD-------------LVSWTTAISAN 387

Query: 443 VRNGFGKTGIYLFVQMLESGVLSNDFAVNAAIQACTDVAALRCGEQLHSLILRSGFTEDC 622
            +NGFG+  I L  QM   G   N +A ++ + +C DVA+L  G Q H L L+ G   + 
Sbjct: 388 FQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEI 447

Query: 623 WSSISLIDFYSRC 661
            +  +LI+ YS+C
Sbjct: 448 CTGNALINMYSKC 460



 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 40/112 (35%), Positives = 60/112 (53%), Gaps = 2/112 (1%)
 Frame = +2

Query: 329 SMLIDLLMKSERPDDAFRVFDEMPQRNVVTWTSMISGCVRNGFGKTGIYLFVQMLESGVL 508
           S LI++  +      A  VFD M   +VV +TS+IS   RNG  +      +QML+ G+ 
Sbjct: 153 SCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLK 212

Query: 509 SNDFAVNAAIQACTDVAALRCGEQLHS-LILRSGF-TEDCWSSISLIDFYSR 658
            N+  +   + AC  V     G+Q+H  LI + G  ++  +SS +LIDFYSR
Sbjct: 213 PNEHTMTTILTACPRV----LGQQIHGYLIKKIGLRSQSVYSSTALIDFYSR 260



 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 38/135 (28%), Positives = 66/135 (48%)
 Frame = +2

Query: 254 KMLPEAMDLFLDMKIQGIKVGVVLESMLIDLLMKSERPDDAFRVFDEMPQRNVVTWTSMI 433
           ++L + +  +L  KI      V   + LID   ++     A  VFD +  +NVV+W SM+
Sbjct: 227 RVLGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMM 286

Query: 434 SGCVRNGFGKTGIYLFVQMLESGVLSNDFAVNAAIQACTDVAALRCGEQLHSLILRSGFT 613
              +R+G  +  + +F  M+  GV  N+FA++  + AC    ++  G QLH   ++    
Sbjct: 287 QLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGAC---GSIGLGRQLHCSAIKHDLI 343

Query: 614 EDCWSSISLIDFYSR 658
            D   S +L+  Y R
Sbjct: 344 TDIRVSNALLSMYGR 358


>gb|AFW67004.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 913

 Score =  125 bits (313), Expect = 1e-26
 Identities = 62/115 (53%), Positives = 75/115 (65%)
 Frame = +2

Query: 317 VVLESMLIDLLMKSERPDDAFRVFDEMPQRNVVTWTSMISGCVRNGFGKTGIYLFVQMLE 496
           VVL+   +D LMKS R  DA  +FD MP++NVV WT+ ISGC RNG  +    +F  MLE
Sbjct: 70  VVLDCKRLDGLMKSGRLGDALDLFDRMPRKNVVAWTTAISGCTRNGRPEAAATMFADMLE 129

Query: 497 SGVLSNDFAVNAAIQACTDVAALRCGEQLHSLILRSGFTEDCWSSISLIDFYSRC 661
           SGV  NDFA NAA+ AC    AL  GEQ+HSL +R+GF  D W    LI+ YSRC
Sbjct: 130 SGVAPNDFACNAALAACAAAGALGLGEQVHSLAVRAGFAADAWIGSCLIELYSRC 184



 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 34/113 (30%), Positives = 61/113 (53%)
 Frame = +2

Query: 323 LESMLIDLLMKSERPDDAFRVFDEMPQRNVVTWTSMISGCVRNGFGKTGIYLFVQMLESG 502
           + + L+ +  +S    +   V  ++   ++V+WT+ IS   +NGF +  + L +QM   G
Sbjct: 368 VSNALLSMYGRSGFVSELEAVLGKIENPDLVSWTAAISANFQNGFSEKAVALLLQMHSEG 427

Query: 503 VLSNDFAVNAAIQACTDVAALRCGEQLHSLILRSGFTEDCWSSISLIDFYSRC 661
              ND+A ++ + +C D+A L  G QLH L L+ G      +  +LI+ YS+C
Sbjct: 428 FTPNDYAFSSGLSSCADLALLHQGRQLHCLALKLGCDFKVCTGNALINMYSKC 480



 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 37/123 (30%), Positives = 61/123 (49%)
 Frame = +2

Query: 290 MKIQGIKVGVVLESMLIDLLMKSERPDDAFRVFDEMPQRNVVTWTSMISGCVRNGFGKTG 469
           +K+ G +  V   + LID   +      A  VF+ +  +NVV+W SM+  C+R+G     
Sbjct: 260 LKVMGSQ-SVYASTALIDFYSRYGDFGTAKTVFENLESKNVVSWCSMMQLCIRDGRLDDA 318

Query: 470 IYLFVQMLESGVLSNDFAVNAAIQACTDVAALRCGEQLHSLILRSGFTEDCWSSISLIDF 649
           + +F +M+  GV  N+FA + A+ AC  V     G Q+H   ++     D   S +L+  
Sbjct: 319 LRVFSEMISEGVQPNEFAFSIALSACGSVC---LGRQIHCSAIKRDLMTDIRVSNALLSM 375

Query: 650 YSR 658
           Y R
Sbjct: 376 YGR 378


>gb|AFW67003.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 719

 Score =  125 bits (313), Expect = 1e-26
 Identities = 62/115 (53%), Positives = 75/115 (65%)
 Frame = +2

Query: 317 VVLESMLIDLLMKSERPDDAFRVFDEMPQRNVVTWTSMISGCVRNGFGKTGIYLFVQMLE 496
           VVL+   +D LMKS R  DA  +FD MP++NVV WT+ ISGC RNG  +    +F  MLE
Sbjct: 70  VVLDCKRLDGLMKSGRLGDALDLFDRMPRKNVVAWTTAISGCTRNGRPEAAATMFADMLE 129

Query: 497 SGVLSNDFAVNAAIQACTDVAALRCGEQLHSLILRSGFTEDCWSSISLIDFYSRC 661
           SGV  NDFA NAA+ AC    AL  GEQ+HSL +R+GF  D W    LI+ YSRC
Sbjct: 130 SGVAPNDFACNAALAACAAAGALGLGEQVHSLAVRAGFAADAWIGSCLIELYSRC 184



 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 34/113 (30%), Positives = 61/113 (53%)
 Frame = +2

Query: 323 LESMLIDLLMKSERPDDAFRVFDEMPQRNVVTWTSMISGCVRNGFGKTGIYLFVQMLESG 502
           + + L+ +  +S    +   V  ++   ++V+WT+ IS   +NGF +  + L +QM   G
Sbjct: 368 VSNALLSMYGRSGFVSELEAVLGKIENPDLVSWTAAISANFQNGFSEKAVALLLQMHSEG 427

Query: 503 VLSNDFAVNAAIQACTDVAALRCGEQLHSLILRSGFTEDCWSSISLIDFYSRC 661
              ND+A ++ + +C D+A L  G QLH L L+ G      +  +LI+ YS+C
Sbjct: 428 FTPNDYAFSSGLSSCADLALLHQGRQLHCLALKLGCDFKVCTGNALINMYSKC 480



 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 37/123 (30%), Positives = 61/123 (49%)
 Frame = +2

Query: 290 MKIQGIKVGVVLESMLIDLLMKSERPDDAFRVFDEMPQRNVVTWTSMISGCVRNGFGKTG 469
           +K+ G +  V   + LID   +      A  VF+ +  +NVV+W SM+  C+R+G     
Sbjct: 260 LKVMGSQ-SVYASTALIDFYSRYGDFGTAKTVFENLESKNVVSWCSMMQLCIRDGRLDDA 318

Query: 470 IYLFVQMLESGVLSNDFAVNAAIQACTDVAALRCGEQLHSLILRSGFTEDCWSSISLIDF 649
           + +F +M+  GV  N+FA + A+ AC  V     G Q+H   ++     D   S +L+  
Sbjct: 319 LRVFSEMISEGVQPNEFAFSIALSACGSVC---LGRQIHCSAIKRDLMTDIRVSNALLSM 375

Query: 650 YSR 658
           Y R
Sbjct: 376 YGR 378


>ref|XP_002466113.1| hypothetical protein SORBIDRAFT_01g001570 [Sorghum bicolor]
           gi|241919967|gb|EER93111.1| hypothetical protein
           SORBIDRAFT_01g001570 [Sorghum bicolor]
          Length = 693

 Score =  123 bits (308), Expect = 6e-26
 Identities = 62/117 (52%), Positives = 76/117 (64%), Gaps = 2/117 (1%)
 Frame = +2

Query: 317 VVLESMLIDLLMKSERPDDAFRVFDEMPQRNVVTWTSMISGCVRNGFGKTGIYLFVQMLE 496
           VVL+   +D LMKS R  DA  +FD MP++NVV WT+ ISGC RNG  +    +F  MLE
Sbjct: 42  VVLDCKRLDALMKSGRLSDALDLFDRMPRKNVVAWTTAISGCTRNGQPEAAAAMFADMLE 101

Query: 497 SGVLSNDFAVNAAIQAC--TDVAALRCGEQLHSLILRSGFTEDCWSSISLIDFYSRC 661
           SGV +NDFA NAA+ AC      AL  GEQ+HSL +R+GF  D W    LI+ YSRC
Sbjct: 102 SGVAANDFACNAALAACAAAGAGALSLGEQVHSLAVRAGFAADAWIGSCLIELYSRC 158



 Score = 67.0 bits (162), Expect = 5e-09
 Identities = 34/113 (30%), Positives = 61/113 (53%)
 Frame = +2

Query: 323 LESMLIDLLMKSERPDDAFRVFDEMPQRNVVTWTSMISGCVRNGFGKTGIYLFVQMLESG 502
           + + L+ +  +S    +   V  ++   ++V+WT+ IS   +NGF +  + L +QM   G
Sbjct: 342 VSNALLSMYGRSGFVSEVEAVLGKIENPDLVSWTAAISANFQNGFSEKAVALLLQMHSEG 401

Query: 503 VLSNDFAVNAAIQACTDVAALRCGEQLHSLILRSGFTEDCWSSISLIDFYSRC 661
              ND+A ++ + +C D+A L  G QLH L L+ G      +  +LI+ YS+C
Sbjct: 402 FTPNDYAFSSGLSSCADLALLDQGRQLHCLALKLGCDFKVCTGNALINMYSKC 454



 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 37/123 (30%), Positives = 62/123 (50%)
 Frame = +2

Query: 290 MKIQGIKVGVVLESMLIDLLMKSERPDDAFRVFDEMPQRNVVTWTSMISGCVRNGFGKTG 469
           +K+ G +  V   + LID   +    D A  VF+ +  +NVV+W SM+  C+R+G  +  
Sbjct: 234 LKVMGSQ-SVYASTALIDFYSRYGDFDMAETVFENLDSKNVVSWCSMMQLCIRDGRLEDA 292

Query: 470 IYLFVQMLESGVLSNDFAVNAAIQACTDVAALRCGEQLHSLILRSGFTEDCWSSISLIDF 649
           + +F +M+   V  N+FA + A+ AC  V     G Q+H   ++     D   S +L+  
Sbjct: 293 LRVFSEMISEAVEPNEFAFSIALGACGSVC---LGRQIHCSAIKCNLMTDIRVSNALLSM 349

Query: 650 YSR 658
           Y R
Sbjct: 350 YGR 352



 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 35/119 (29%), Positives = 59/119 (49%)
 Frame = +2

Query: 302 GIKVGVVLESMLIDLLMKSERPDDAFRVFDEMPQRNVVTWTSMISGCVRNGFGKTGIYLF 481
           G      + S LI+L  +      A  VF  M   +VV +TS++S   RNG     + + 
Sbjct: 140 GFAADAWIGSCLIELYSRCGSMWAAEEVFRRMEAPDVVGYTSLVSALCRNGDLARAVEVL 199

Query: 482 VQMLESGVLSNDFAVNAAIQACTDVAALRCGEQLHSLILRSGFTEDCWSSISLIDFYSR 658
            QM+  G+  N+  + + +  C  +     GEQ+H  +L+   ++  ++S +LIDFYSR
Sbjct: 200 CQMMRQGLQPNEHTMTSMLAECPRM----IGEQIHGYMLKVMGSQSVYASTALIDFYSR 254


>ref|XP_003559158.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Brachypodium distachyon]
          Length = 695

 Score =  120 bits (302), Expect = 3e-25
 Identities = 58/115 (50%), Positives = 75/115 (65%)
 Frame = +2

Query: 317 VVLESMLIDLLMKSERPDDAFRVFDEMPQRNVVTWTSMISGCVRNGFGKTGIYLFVQMLE 496
           VV +   +D LMKS    DA  +FD MP++N+V WTS +SG  RNG  +  +  F  M+ 
Sbjct: 27  VVHDCKRLDRLMKSGSLGDALDLFDRMPRKNIVAWTSAVSGLTRNGRPEAAMAAFADMVA 86

Query: 497 SGVLSNDFAVNAAIQACTDVAALRCGEQLHSLILRSGFTEDCWSSISLIDFYSRC 661
           SGV  NDFA NAA+ AC D +ALR GEQ+HSL +R+GF  D W   SL++ YSRC
Sbjct: 87  SGVAPNDFAFNAALAACADASALRAGEQVHSLAVRAGFAGDSWVGSSLVELYSRC 141



 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 31/93 (33%), Positives = 53/93 (56%)
 Frame = +2

Query: 383 VFDEMPQRNVVTWTSMISGCVRNGFGKTGIYLFVQMLESGVLSNDFAVNAAIQACTDVAA 562
           V  ++   ++V+WT+ IS   +NGF +  I L   +   G++ ND+A ++A+ +C D+A 
Sbjct: 349 VLKDIENPDIVSWTTAISANFQNGFSEKAIALLSMLHSRGLMPNDYAFSSALSSCADLAL 408

Query: 563 LRCGEQLHSLILRSGFTEDCWSSISLIDFYSRC 661
           L  G Q H L L+ G      +  +LI+ YS+C
Sbjct: 409 LDQGRQFHCLALKLGCDLKICTGNALINLYSKC 441



 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 39/111 (35%), Positives = 60/111 (54%), Gaps = 1/111 (0%)
 Frame = +2

Query: 329 SMLIDLLMKSERPDDAFRVFDEMPQRNVVTWTSMISGCVRNGFGKTGIYLFVQMLESGVL 508
           S LID   ++   D A  VF+ +  +NVVTW SM+   +R+G  +  + +F  M+  GV+
Sbjct: 232 SALIDFYSRNSEFDMAKAVFNNLHCKNVVTWCSMMQLHIRDGRPEDALQVFDDMISEGVV 291

Query: 509 S-NDFAVNAAIQACTDVAALRCGEQLHSLILRSGFTEDCWSSISLIDFYSR 658
             N+FA + A+ AC  +A    G QLHS  ++   T D   S +L+  Y R
Sbjct: 292 EPNEFAFSIALGACGSIA---LGRQLHSSAIKRNLTSDLRVSNALLSMYGR 339


>ref|XP_002466114.1| hypothetical protein SORBIDRAFT_01g001585 [Sorghum bicolor]
           gi|241919968|gb|EER93112.1| hypothetical protein
           SORBIDRAFT_01g001585 [Sorghum bicolor]
          Length = 627

 Score =  115 bits (289), Expect = 9e-24
 Identities = 60/117 (51%), Positives = 76/117 (64%), Gaps = 2/117 (1%)
 Frame = +2

Query: 317 VVLESMLIDLLMKSERPDDAFRVFDEMPQRNVVTWTSMISGCVRNGFGKTGIYLFVQMLE 496
           VVL+   +D LMKS R  DA  +FD MP++NVV WT+ IS C RNG+ +    +F  MLE
Sbjct: 43  VVLDCKRLDGLMKSGRLGDALDLFDRMPRKNVVAWTTAISECTRNGWLEATAAMFADMLE 102

Query: 497 SGVLSNDFAVNAAIQACTDVA--ALRCGEQLHSLILRSGFTEDCWSSISLIDFYSRC 661
           SGV +NDFA NAA+ AC   +  AL   EQ+HSL +R+GF  D W    LI+ YSRC
Sbjct: 103 SGVAANDFACNAALAACAAASAHALSLDEQVHSLAVRAGFAADAWIGSCLIELYSRC 159



 Score = 66.6 bits (161), Expect = 6e-09
 Identities = 34/113 (30%), Positives = 61/113 (53%)
 Frame = +2

Query: 323 LESMLIDLLMKSERPDDAFRVFDEMPQRNVVTWTSMISGCVRNGFGKTGIYLFVQMLESG 502
           + + L+ +  +S    +   V  ++   ++V+WT+ IS   +NGF +  + L +QM   G
Sbjct: 274 VSNALLSMYGRSGFVSEIDAVLGKIENPDLVSWTAAISANFQNGFSEKAVALLLQMHSEG 333

Query: 503 VLSNDFAVNAAIQACTDVAALRCGEQLHSLILRSGFTEDCWSSISLIDFYSRC 661
              ND+A ++ + +C D+A L  G QLH L L+ G      +  +LI+ YS+C
Sbjct: 334 FTPNDYAFSSGLSSCADLALLDQGRQLHCLALKLGCDFKVCTGNALINMYSKC 386



 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 35/114 (30%), Positives = 58/114 (50%)
 Frame = +2

Query: 317 VVLESMLIDLLMKSERPDDAFRVFDEMPQRNVVTWTSMISGCVRNGFGKTGIYLFVQMLE 496
           V   + LID   +    D A  VF+ +  +NVV+W SM+  C+R+G  +  + +F +M+ 
Sbjct: 174 VYASTALIDFYSRHGDFDMAETVFENLDSKNVVSWCSMMQLCIRDGRLEDALRVFSEMIS 233

Query: 497 SGVLSNDFAVNAAIQACTDVAALRCGEQLHSLILRSGFTEDCWSSISLIDFYSR 658
             V  N+FA + A+ AC  V     G Q+H  +++     D   S +L+  Y R
Sbjct: 234 EAVEPNEFAFSIALGACGFVC---LGRQIHCSVIKCNLMTDIRVSNALLSMYGR 284


>dbj|BAJ88475.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 691

 Score =  111 bits (278), Expect = 2e-22
 Identities = 57/117 (48%), Positives = 74/117 (63%), Gaps = 2/117 (1%)
 Frame = +2

Query: 317 VVLESMLIDLLMKSERPDDAFRVFDEMPQRNVVTWTSMISGCVRNGFGKTGIYLFVQMLE 496
           VV +   +D LMK+ R  DA  +FD MP++NVV WTS +SG  RNG  +    +F  M+E
Sbjct: 29  VVRDCKRLDGLMKAGRVADALDLFDRMPRKNVVAWTSAVSGLTRNGRPEAAGEMFADMVE 88

Query: 497 SGVLSNDFAVNAAIQACTDV--AALRCGEQLHSLILRSGFTEDCWSSISLIDFYSRC 661
           SGV  NDFA NAA+ AC      ALR GEQ+HSL +R+GF  D W    L++ Y+RC
Sbjct: 89  SGVALNDFACNAALAACAAAGPGALRTGEQVHSLAVRAGFVGDAWVGSCLVELYARC 145



 Score = 72.8 bits (177), Expect = 9e-11
 Identities = 43/124 (34%), Positives = 66/124 (53%), Gaps = 1/124 (0%)
 Frame = +2

Query: 290 MKIQGIKVGVVLESMLIDLLMKSERPDDAFRVFDEMPQRNVVTWTSMISGCVRNGFGKTG 469
           +K  G    V   S L+D   ++   D A  VFD +  +NVVTW +M+   +R+G  +  
Sbjct: 222 IKAMGFSQSVYTSSTLVDFYSRNGEFDMAKTVFDNLQCKNVVTWCTMMQLHIRDGRPEDA 281

Query: 470 IYLFVQMLESGVLS-NDFAVNAAIQACTDVAALRCGEQLHSLILRSGFTEDCWSSISLID 646
           + LF +M+  GV+S N+FA + A+ AC  +A    G QLHSL ++ G       S +L+ 
Sbjct: 282 LQLFDEMISEGVVSPNEFAFSIALGACESIA---LGSQLHSLAIKHGLASHLRVSNALLS 338

Query: 647 FYSR 658
            Y R
Sbjct: 339 MYGR 342



 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 31/93 (33%), Positives = 52/93 (55%)
 Frame = +2

Query: 383 VFDEMPQRNVVTWTSMISGCVRNGFGKTGIYLFVQMLESGVLSNDFAVNAAIQACTDVAA 562
           +F  +   ++V+WT+ IS   +NG G+  I L  +M   G+  ND+A ++ + +C D+A 
Sbjct: 352 MFRGIEDPDIVSWTAAISAYFQNGHGEKAIALLSRMHSQGLTPNDYAFSSVLSSCADLAL 411

Query: 563 LRCGEQLHSLILRSGFTEDCWSSISLIDFYSRC 661
           L  G Q H L L+ G      +  +LI+ YS+C
Sbjct: 412 LDQGRQFHCLALKLGCDVKTCTGNALINMYSKC 444


>dbj|BAJ89568.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 691

 Score =  111 bits (278), Expect = 2e-22
 Identities = 57/117 (48%), Positives = 74/117 (63%), Gaps = 2/117 (1%)
 Frame = +2

Query: 317 VVLESMLIDLLMKSERPDDAFRVFDEMPQRNVVTWTSMISGCVRNGFGKTGIYLFVQMLE 496
           VV +   +D LMK+ R  DA  +FD MP++NVV WTS +SG  RNG  +    +F  M+E
Sbjct: 29  VVRDCKRLDGLMKAGRVADALDLFDRMPRKNVVAWTSAVSGLTRNGRPEAAGEMFADMVE 88

Query: 497 SGVLSNDFAVNAAIQACTDV--AALRCGEQLHSLILRSGFTEDCWSSISLIDFYSRC 661
           SGV  NDFA NAA+ AC      ALR GEQ+HSL +R+GF  D W    L++ Y+RC
Sbjct: 89  SGVALNDFACNAALAACAAAGPGALRTGEQVHSLAVRAGFVGDAWVGSCLVELYARC 145



 Score = 72.8 bits (177), Expect = 9e-11
 Identities = 43/124 (34%), Positives = 66/124 (53%), Gaps = 1/124 (0%)
 Frame = +2

Query: 290 MKIQGIKVGVVLESMLIDLLMKSERPDDAFRVFDEMPQRNVVTWTSMISGCVRNGFGKTG 469
           +K  G    V   S L+D   ++   D A  VFD +  +NVVTW +M+   +R+G  +  
Sbjct: 222 IKAMGFSQSVYTSSTLVDFYSRNGEFDMAKTVFDNLQCKNVVTWCTMMQLHIRDGRPEDA 281

Query: 470 IYLFVQMLESGVLS-NDFAVNAAIQACTDVAALRCGEQLHSLILRSGFTEDCWSSISLID 646
           + LF +M+  GV+S N+FA + A+ AC  +A    G QLHSL ++ G       S +L+ 
Sbjct: 282 LQLFDEMISEGVVSPNEFAFSIALGACESIA---LGSQLHSLAIKHGLASHLRVSNALLS 338

Query: 647 FYSR 658
            Y R
Sbjct: 339 MYGR 342



 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 31/93 (33%), Positives = 52/93 (55%)
 Frame = +2

Query: 383 VFDEMPQRNVVTWTSMISGCVRNGFGKTGIYLFVQMLESGVLSNDFAVNAAIQACTDVAA 562
           +F  +   ++V+WT+ IS   +NG G+  I L  +M   G+  ND+A ++ + +C D+A 
Sbjct: 352 MFRGIEDPDIVSWTAAISAYFQNGHGEKAIALLSRMHSQGLTPNDYAFSSVLSSCADLAL 411

Query: 563 LRCGEQLHSLILRSGFTEDCWSSISLIDFYSRC 661
           L  G Q H L L+ G      +  +LI+ YS+C
Sbjct: 412 LDQGRQFHCLALKLGCDVKTCTGNALINMYSKC 444


>gb|ABF99847.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1221

 Score =  107 bits (267), Expect = 3e-21
 Identities = 49/89 (55%), Positives = 63/89 (70%)
 Frame = +2

Query: 395 MPQRNVVTWTSMISGCVRNGFGKTGIYLFVQMLESGVLSNDFAVNAAIQACTDVAALRCG 574
           MP++NVV WTS++SG  RNG  +  + +F  M+ESGV  NDFA NAA+ AC D+ ALR G
Sbjct: 1   MPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAG 60

Query: 575 EQLHSLILRSGFTEDCWSSISLIDFYSRC 661
           EQ+HSL +R+GF  D W    LI+ YSRC
Sbjct: 61  EQVHSLAVRAGFAGDAWIGSCLIEMYSRC 89



 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 41/133 (30%), Positives = 67/133 (50%), Gaps = 4/133 (3%)
 Frame = +2

Query: 275 DLFLDMKIQGIKVGVVLESMLID----LLMKSERPDDAFRVFDEMPQRNVVTWTSMISGC 442
           DL  D+++    + +   + L++    +L K E PD             +V+WT+ IS  
Sbjct: 268 DLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPD-------------LVSWTTAISAN 314

Query: 443 VRNGFGKTGIYLFVQMLESGVLSNDFAVNAAIQACTDVAALRCGEQLHSLILRSGFTEDC 622
            +NGFG+  I L  QM   G   N +A ++ + +C DVA+L  G Q H L L+ G   + 
Sbjct: 315 FQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEI 374

Query: 623 WSSISLIDFYSRC 661
            +  +LI+ YS+C
Sbjct: 375 CTGNALINMYSKC 387



 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 40/112 (35%), Positives = 60/112 (53%), Gaps = 2/112 (1%)
 Frame = +2

Query: 329 SMLIDLLMKSERPDDAFRVFDEMPQRNVVTWTSMISGCVRNGFGKTGIYLFVQMLESGVL 508
           S LI++  +      A  VFD M   +VV +TS+IS   RNG  +      +QML+ G+ 
Sbjct: 80  SCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLK 139

Query: 509 SNDFAVNAAIQACTDVAALRCGEQLHS-LILRSGF-TEDCWSSISLIDFYSR 658
            N+  +   + AC  V     G+Q+H  LI + G  ++  +SS +LIDFYSR
Sbjct: 140 PNEHTMTTILTACPRV----LGQQIHGYLIKKIGLRSQSVYSSTALIDFYSR 187



 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 38/135 (28%), Positives = 66/135 (48%)
 Frame = +2

Query: 254 KMLPEAMDLFLDMKIQGIKVGVVLESMLIDLLMKSERPDDAFRVFDEMPQRNVVTWTSMI 433
           ++L + +  +L  KI      V   + LID   ++     A  VFD +  +NVV+W SM+
Sbjct: 154 RVLGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMM 213

Query: 434 SGCVRNGFGKTGIYLFVQMLESGVLSNDFAVNAAIQACTDVAALRCGEQLHSLILRSGFT 613
              +R+G  +  + +F  M+  GV  N+FA++  + AC    ++  G QLH   ++    
Sbjct: 214 QLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGAC---GSIGLGRQLHCSAIKHDLI 270

Query: 614 EDCWSSISLIDFYSR 658
            D   S +L+  Y R
Sbjct: 271 TDIRVSNALLSMYGR 285


>emb|CBI21510.3| unnamed protein product [Vitis vinifera]
          Length = 746

 Score =  103 bits (257), Expect = 5e-20
 Identities = 62/184 (33%), Positives = 103/184 (55%), Gaps = 9/184 (4%)
 Frame = +2

Query: 134 FRPPKLGIPNQSSSSAPFALTVGPTIT-PNSVRKLKQLVALKMLPEAMDLFLDMKI---- 298
           +R  K    N S+S +P  L   P +  PN   K ++   L  L  + +  +  KI    
Sbjct: 15  YRTTKKQAFNFSTSVSPQFLLQNPCLQIPNLRPKRREFANLLQLSISRNPIIHYKIIHGQ 74

Query: 299 ---QGIKVGVVLESMLIDLLMKSERPDDAFRVFDEMPQRNVVTWTSMISGCVRNGFGKTG 469
               G++    L ++LI++  KS+R D+A  VFD+MP +N++TW+SM+S   + G+ +  
Sbjct: 75  IIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEA 134

Query: 470 IYLFVQM-LESGVLSNDFAVNAAIQACTDVAALRCGEQLHSLILRSGFTEDCWSSISLID 646
           + +FV +  +SG   N+F + + I+ACT +  +  G QLH  ++RSGF +D +   SLID
Sbjct: 135 LMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLID 194

Query: 647 FYSR 658
           FYS+
Sbjct: 195 FYSK 198



 Score = 79.3 bits (194), Expect = 9e-13
 Identities = 40/120 (33%), Positives = 69/120 (57%)
 Frame = +2

Query: 302 GIKVGVVLESMLIDLLMKSERPDDAFRVFDEMPQRNVVTWTSMISGCVRNGFGKTGIYLF 481
           G    V + + LID   K+   ++A  VFD++ ++  VTWT++I+G  + G     + LF
Sbjct: 181 GFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELF 240

Query: 482 VQMLESGVLSNDFAVNAAIQACTDVAALRCGEQLHSLILRSGFTEDCWSSISLIDFYSRC 661
            QM E+ V+ + + V++ + AC+ +  L  G+Q+H+ +LR G   D      LIDFY++C
Sbjct: 241 AQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKC 300



 Score = 70.9 bits (172), Expect = 3e-10
 Identities = 36/120 (30%), Positives = 66/120 (55%)
 Frame = +2

Query: 299 QGIKVGVVLESMLIDLLMKSERPDDAFRVFDEMPQRNVVTWTSMISGCVRNGFGKTGIYL 478
           +G ++ V + ++LID   K  R     ++FD+M  +N+++WT+MISG ++N F    + L
Sbjct: 281 RGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKL 340

Query: 479 FVQMLESGVLSNDFAVNAAIQACTDVAALRCGEQLHSLILRSGFTEDCWSSISLIDFYSR 658
           F +M   G   + FA  + + +C    AL  G Q+H+  +++    D +    LID Y++
Sbjct: 341 FGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAK 400



 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 35/109 (32%), Positives = 61/109 (55%)
 Frame = +2

Query: 335 LIDLLMKSERPDDAFRVFDEMPQRNVVTWTSMISGCVRNGFGKTGIYLFVQMLESGVLSN 514
           LID+  KS    DA +VFD M ++NV+++ +MI G          + LF +M       N
Sbjct: 394 LIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLQKPN 453

Query: 515 DFAVNAAIQACTDVAALRCGEQLHSLILRSGFTEDCWSSISLIDFYSRC 661
           +F   A I A +++A+LR G+Q H+ +++ G     + + +L+D Y++C
Sbjct: 454 EFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKC 502


>ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Vitis vinifera]
          Length = 825

 Score =  100 bits (248), Expect = 5e-19
 Identities = 57/173 (32%), Positives = 96/173 (55%), Gaps = 1/173 (0%)
 Frame = +2

Query: 143 PKLGIPNQSSSSAPFALTVGPTITPNSVRKLKQLVALKMLPEAMDLFLDMKIQGIKVGVV 322
           P L IPN       FA  +  +I+ N +   K +               + + G++    
Sbjct: 16  PCLQIPNLRPKRREFANLLQLSISRNPIIHYKIIHG------------QIIVSGLQSDTF 63

Query: 323 LESMLIDLLMKSERPDDAFRVFDEMPQRNVVTWTSMISGCVRNGFGKTGIYLFVQM-LES 499
           L ++LI++  KS+R D+A  VFD+MP +N++TW+SM+S   + G+ +  + +FV +  +S
Sbjct: 64  LANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKS 123

Query: 500 GVLSNDFAVNAAIQACTDVAALRCGEQLHSLILRSGFTEDCWSSISLIDFYSR 658
           G   N+F + + I+ACT +  +  G QLH  ++RSGF +D +   SLIDFYS+
Sbjct: 124 GEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSK 176



 Score = 79.3 bits (194), Expect = 9e-13
 Identities = 40/120 (33%), Positives = 69/120 (57%)
 Frame = +2

Query: 302 GIKVGVVLESMLIDLLMKSERPDDAFRVFDEMPQRNVVTWTSMISGCVRNGFGKTGIYLF 481
           G    V + + LID   K+   ++A  VFD++ ++  VTWT++I+G  + G     + LF
Sbjct: 159 GFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELF 218

Query: 482 VQMLESGVLSNDFAVNAAIQACTDVAALRCGEQLHSLILRSGFTEDCWSSISLIDFYSRC 661
            QM E+ V+ + + V++ + AC+ +  L  G+Q+H+ +LR G   D      LIDFY++C
Sbjct: 219 AQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKC 278



 Score = 70.9 bits (172), Expect = 3e-10
 Identities = 36/120 (30%), Positives = 66/120 (55%)
 Frame = +2

Query: 299 QGIKVGVVLESMLIDLLMKSERPDDAFRVFDEMPQRNVVTWTSMISGCVRNGFGKTGIYL 478
           +G ++ V + ++LID   K  R     ++FD+M  +N+++WT+MISG ++N F    + L
Sbjct: 259 RGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKL 318

Query: 479 FVQMLESGVLSNDFAVNAAIQACTDVAALRCGEQLHSLILRSGFTEDCWSSISLIDFYSR 658
           F +M   G   + FA  + + +C    AL  G Q+H+  +++    D +    LID Y++
Sbjct: 319 FGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAK 378



 Score = 66.2 bits (160), Expect = 8e-09
 Identities = 42/134 (31%), Positives = 73/134 (54%), Gaps = 6/134 (4%)
 Frame = +2

Query: 278 LFLDMKIQG--IKVGVVLE----SMLIDLLMKSERPDDAFRVFDEMPQRNVVTWTSMISG 439
           L L  +I G  IK GV L+    S LID+  K     DA  VF+EM ++++V W +M  G
Sbjct: 448 LELSKQIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFG 507

Query: 440 CVRNGFGKTGIYLFVQMLESGVLSNDFAVNAAIQACTDVAALRCGEQLHSLILRSGFTED 619
             ++   +  + L+  +  S    N+F   A I A +++A+LR G+Q H+ +++ G    
Sbjct: 508 YTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFC 567

Query: 620 CWSSISLIDFYSRC 661
            + + +L+D Y++C
Sbjct: 568 PFVTNALVDMYAKC 581


>ref|XP_006297059.1| hypothetical protein CARUB_v10013060mg [Capsella rubella]
           gi|482565768|gb|EOA29957.1| hypothetical protein
           CARUB_v10013060mg [Capsella rubella]
          Length = 730

 Score = 95.9 bits (237), Expect = 1e-17
 Identities = 47/121 (38%), Positives = 74/121 (61%)
 Frame = +2

Query: 299 QGIKVGVVLESMLIDLLMKSERPDDAFRVFDEMPQRNVVTWTSMISGCVRNGFGKTGIYL 478
           +GI   V + S L+D+  KS R +D+ RVF  + +R+ ++W S+++G V+NG     + L
Sbjct: 286 KGIDADVYIGSSLVDMYAKSARIEDSERVFSHLARRDSISWNSLVAGYVQNGRYNEALRL 345

Query: 479 FVQMLESGVLSNDFAVNAAIQACTDVAALRCGEQLHSLILRSGFTEDCWSSISLIDFYSR 658
           F QM+ + V     A ++ I AC  +A LR G+QLH  +LR GF  + + S SL+D YS+
Sbjct: 346 FRQMVTTKVRPGPVAFSSVIPACAHLATLRLGKQLHGYVLRGGFGSNIFISSSLVDMYSK 405

Query: 659 C 661
           C
Sbjct: 406 C 406


>ref|XP_002867987.1| binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297313823|gb|EFH44246.1| binding protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 616

 Score = 95.9 bits (237), Expect = 1e-17
 Identities = 45/122 (36%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
 Frame = +2

Query: 305 IKVGV---VLESMLIDLLMKSERPDDAFRVFDEMPQRNVVTWTSMISGCVRNGFGKTGIY 475
           +KVGV   ++ES L+    +      A R FD M +++V++WT++IS C R G G   I+
Sbjct: 211 VKVGVGNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGNKAIF 270

Query: 476 LFVQMLESGVLSNDFAVNAAIQACTDVAALRCGEQLHSLILRSGFTEDCWSSISLIDFYS 655
           +F+ ML  G L N+F V + ++AC++  A+R G Q+HSL+++     D +   SL+D Y+
Sbjct: 271 MFIGMLNHGFLPNEFTVCSILKACSEEKAIRFGRQVHSLVVKRMIKTDVFVGTSLMDMYA 330

Query: 656 RC 661
           +C
Sbjct: 331 KC 332



 Score = 81.3 bits (199), Expect = 2e-13
 Identities = 41/119 (34%), Positives = 68/119 (57%)
 Frame = +2

Query: 305 IKVGVVLESMLIDLLMKSERPDDAFRVFDEMPQRNVVTWTSMISGCVRNGFGKTGIYLFV 484
           IK  V + + L+D+  K     D  +VFD M  RN VTWTS+I+   R GFG+  I LF 
Sbjct: 315 IKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFR 374

Query: 485 QMLESGVLSNDFAVNAAIQACTDVAALRCGEQLHSLILRSGFTEDCWSSISLIDFYSRC 661
            M    +++N+  V + ++AC  V AL  G++LH+ I+++   ++ +   +L+  Y +C
Sbjct: 375 VMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKC 433



 Score = 76.6 bits (187), Expect = 6e-12
 Identities = 38/119 (31%), Positives = 65/119 (54%)
 Frame = +2

Query: 305 IKVGVVLESMLIDLLMKSERPDDAFRVFDEMPQRNVVTWTSMISGCVRNGFGKTGIYLFV 484
           I+  V + S L+ L  K     DAF V  ++P R+VV+WT+MISGC   G     +    
Sbjct: 416 IEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLK 475

Query: 485 QMLESGVLSNDFAVNAAIQACTDVAALRCGEQLHSLILRSGFTEDCWSSISLIDFYSRC 661
           +M++ GV  N F  ++A++AC +  +L  G  +HS+  ++    + +   +LI  Y++C
Sbjct: 476 EMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKC 534



 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 35/109 (32%), Positives = 52/109 (47%), Gaps = 6/109 (5%)
 Frame = +2

Query: 248 ALKMLPEAMDLFLDMKIQGIKV------GVVLESMLIDLLMKSERPDDAFRVFDEMPQRN 409
           ALK    +  L +   I  I         V + S LI +  K     +AFRVFD MP++N
Sbjct: 492 ALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKN 551

Query: 410 VVTWTSMISGCVRNGFGKTGIYLFVQMLESGVLSNDFAVNAAIQACTDV 556
           +V+W +MI G  RNGF +  + L  +M   G   +D+     +  C D+
Sbjct: 552 LVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTCGDI 600


>ref|XP_002516589.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223544409|gb|EEF45930.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 367

 Score = 95.9 bits (237), Expect = 1e-17
 Identities = 56/156 (35%), Positives = 89/156 (57%), Gaps = 5/156 (3%)
 Frame = +2

Query: 209 ITPNSVRKLKQLVALKMLPE---AMDLFLDMKIQGIKVGVVLESMLIDLLMKSERPDDAF 379
           + PN       L A  ML      M +  +    G  + +V+ + ++D+  K  R  +A 
Sbjct: 6   VKPNEFTFSMNLKASSMLNRPYIGMQIHANCTKSGNDIVIVVANSIVDMYSKCGRIKEAA 65

Query: 380 RVFDEMPQRNVVTWTSMISGCVRNGFGKTGIYLFVQMLESGVLSNDFAVNAAIQACTDVA 559
            +FD MP RN+++W SMISG    GFG+  + LF +MLE G   ++F + +A++AC+D+A
Sbjct: 66  CMFDFMPVRNLISWNSMISGYSIAGFGEKAVVLFREMLEDGQEPDEFTLTSALKACSDLA 125

Query: 560 ALRCGEQLHSLILRSGFTEDCWSSI--SLIDFYSRC 661
           A+R G Q+HS ++ SGF     +SI  +LID Y +C
Sbjct: 126 AVREGSQIHSFLIISGFPYLIKTSIAGALIDQYVKC 161


>ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Vitis vinifera]
          Length = 1053

 Score = 95.5 bits (236), Expect = 1e-17
 Identities = 46/114 (40%), Positives = 69/114 (60%)
 Frame = +2

Query: 317 VVLESMLIDLLMKSERPDDAFRVFDEMPQRNVVTWTSMISGCVRNGFGKTGIYLFVQMLE 496
           V L + LI L  K     DA RV DEMP+RNVV+WT+MISG  + G+    ++LFV+ML 
Sbjct: 512 VYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLM 571

Query: 497 SGVLSNDFAVNAAIQACTDVAALRCGEQLHSLILRSGFTEDCWSSISLIDFYSR 658
           SG   N+F     + +CT  +  + G Q+HSL++++ F    +   SL+D Y++
Sbjct: 572 SGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAK 625



 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 40/115 (34%), Positives = 67/115 (58%)
 Frame = +2

Query: 317 VVLESMLIDLLMKSERPDDAFRVFDEMPQRNVVTWTSMISGCVRNGFGKTGIYLFVQMLE 496
           + + S L+D+  K+ +  +A RVFD +P+R+VV+ T++ISG  + G  +  + LF ++  
Sbjct: 613 IFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQR 672

Query: 497 SGVLSNDFAVNAAIQACTDVAALRCGEQLHSLILRSGFTEDCWSSISLIDFYSRC 661
            G+ SN     + + A + +AAL  G Q+HS +LR+          SLID YS+C
Sbjct: 673 EGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKC 727