BLASTX nr result

ID: Zingiber24_contig00047439 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00047439
         (917 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ESA23680.1| hypothetical protein GLOINDRAFT_104797 [Rhizophag...    60   1e-06

>gb|ESA23680.1| hypothetical protein GLOINDRAFT_104797 [Rhizophagus irregularis DAOM
            181602]
          Length = 958

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 58/218 (26%), Positives = 100/218 (45%), Gaps = 9/218 (4%)
 Frame = +2

Query: 251  QTNHVTNLPINSQYPQPNEKHNDNCSHAQTHTM-----TSI*L---QIRIRSMI-PKPQE 403
            Q +H     I+ Q PQP +    N SH QT        TS  +   Q+  RS+I P   +
Sbjct: 469  QHSHQQQQQIHQQQPQPQQHQLQNLSHQQTRNQYAQPYTSPHMNPNQMNQRSVISPNTVQ 528

Query: 404  NSSFAVQNPRLQTINNSSKPSRSTKRQIIHHFIQSKPSQNRIQSSVTKQEHHQLTQSNQE 583
            N   A  +PRL    ++ KPS     Q++   +QS+ +Q   Q+   +Q+ HQ  QS+Q 
Sbjct: 529  N---AKTSPRL--TKSAVKPSIQPGTQVLPQHLQSQQAQQAQQAQQAQQQLHQ--QSSQL 581

Query: 584  SHRTSNQN*EFARKLEI*LNPPVDILILHLDKHVSR*NLKPRQHSRIRFHNQLQPIRTPE 763
            SH++  Q  +  +K +   + P+     H  + + +  ++   HS+   H+  Q  + P+
Sbjct: 582  SHQSQIQQQQQQQKQQQQHSTPI-----HQQQAIQQQQMQQLHHSQTMHHHHQQQ-QIPQ 635

Query: 764  SHEKETLQGNRLQQH*IYRQNKSRSTSIQAKHQQNINP 877
             H ++++   ++QQ     Q KS  T      + N  P
Sbjct: 636  QHSEQSMSQIQMQQQ---MQQKSNQTPQNKMMRSNAQP 670


Top