BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00047432
         (291 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006355831.1| PREDICTED: pentatricopeptide repeat-containi...    68   1e-09
ref|XP_004240647.1| PREDICTED: pentatricopeptide repeat-containi...    66   4e-09
ref|XP_004955927.1| PREDICTED: pentatricopeptide repeat-containi...    64   2e-08
ref|XP_002308572.2| hypothetical protein POPTR_0006s24730g [Popu...    64   3e-08
gb|EPS73636.1| hypothetical protein M569_01119 [Genlisea aurea]        62   6e-08
gb|EXB85809.1| hypothetical protein L484_009655 [Morus notabilis]      62   8e-08
ref|XP_006604760.1| PREDICTED: pentatricopeptide repeat-containi...    62   8e-08
ref|XP_006604759.1| PREDICTED: pentatricopeptide repeat-containi...    62   8e-08
ref|XP_006661209.1| PREDICTED: pentatricopeptide repeat-containi...    61   2e-07
ref|XP_006591720.1| PREDICTED: pentatricopeptide repeat-containi...    61   2e-07
ref|NP_001063138.1| Os09g0407800 [Oryza sativa Japonica Group] g...    61   2e-07
gb|EAZ44684.1| hypothetical protein OsJ_29310 [Oryza sativa Japo...    61   2e-07
emb|CBI36977.3| unnamed protein product [Vitis vinifera]               60   2e-07
ref|XP_002521241.1| pentatricopeptide repeat-containing protein,...    60   3e-07
gb|EAZ09058.1| hypothetical protein OsI_31319 [Oryza sativa Indi...    60   3e-07
gb|ESW35233.1| hypothetical protein PHAVU_001G217700g [Phaseolus...    60   4e-07
gb|EPS64899.1| hypothetical protein M569_09880, partial [Genlise...    60   4e-07
gb|EOX93361.1| Tetratricopeptide repeat-like superfamily protein...    60   4e-07
ref|XP_004306131.1| PREDICTED: pentatricopeptide repeat-containi...    60   4e-07
ref|XP_004148898.1| PREDICTED: pentatricopeptide repeat-containi...    60   4e-07

>ref|XP_006355831.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Solanum tuberosum]
          Length = 529

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 33/89 (37%), Positives = 47/89 (52%)
 Frame = -1

Query: 285 LMSYVTLHSSAQLNSVXXXXXXXXXLTNAVEAFRSNSHLTDTTSWNLMLSGYATHGRPQC 106
           L   ++  S+  LN           L  A + F  + HLT+  SWN +++GY  H   Q 
Sbjct: 9   LRRQISTLSTVNLNKTINSFIGNGNLQEARKLFDQSPHLTNVVSWNSLIAGYFKHNLIQQ 68

Query: 105 AHKMFDEMPRRDIVSWNTILSAFRRTGRP 19
           A  +FD+MP RD+VSWNT+LS +R    P
Sbjct: 69  AEYLFDKMPHRDVVSWNTMLSGYRNANNP 97


>ref|XP_004240647.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Solanum lycopersicum]
          Length = 630

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 33/89 (37%), Positives = 46/89 (51%)
 Frame = -1

Query: 285 LMSYVTLHSSAQLNSVXXXXXXXXXLTNAVEAFRSNSHLTDTTSWNLMLSGYATHGRPQC 106
           L   ++  S+  LN           L  A + F  + HLT+  SWN + +GY  H   Q 
Sbjct: 9   LCRQISTLSTVNLNKTINRFIGNGNLQEARKFFDQSPHLTNVVSWNSLTAGYFKHNLIQK 68

Query: 105 AHKMFDEMPRRDIVSWNTILSAFRRTGRP 19
           A  +FD+MP RD+VSWNT+LS +R    P
Sbjct: 69  AEYLFDKMPHRDVVSWNTMLSGYRNANNP 97


>ref|XP_004955927.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Setaria italica]
          Length = 601

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 26/49 (53%), Positives = 36/49 (73%)
 Frame = -1

Query: 171 LTDTTSWNLMLSGYATHGRPQCAHKMFDEMPRRDIVSWNTILSAFRRTG 25
           + D  SWNLM+SGYAT G  + A  +FDEM R+D+VSW  ++SA+ +TG
Sbjct: 244 IRDAISWNLMISGYATRGDVEAARSLFDEMDRKDVVSWTAMVSAYAKTG 292


>ref|XP_002308572.2| hypothetical protein POPTR_0006s24730g [Populus trichocarpa]
           gi|550337026|gb|EEE92095.2| hypothetical protein
           POPTR_0006s24730g [Populus trichocarpa]
          Length = 602

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 25/58 (43%), Positives = 37/58 (63%)
 Frame = -1

Query: 195 EAFRSNSHLTDTTSWNLMLSGYATHGRPQCAHKMFDEMPRRDIVSWNTILSAFRRTGR 22
           + F  + H  D  +WN ML+G+A  G+     K+FDEMP RD++SWNT+L A+   G+
Sbjct: 153 QVFDESPHHCDVVTWNAMLAGFARDGQVSVVQKLFDEMPERDVISWNTMLMAYVHNGK 210


>gb|EPS73636.1| hypothetical protein M569_01119 [Genlisea aurea]
          Length = 764

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 29/75 (38%), Positives = 45/75 (60%)
 Frame = -1

Query: 249 LNSVXXXXXXXXXLTNAVEAFRSNSHLTDTTSWNLMLSGYATHGRPQCAHKMFDEMPRRD 70
           LN++         +++A + FRS S   D  SWN M+SGY  +G    A K+FDEMP+RD
Sbjct: 317 LNALIHMYSKCGVVSSAEKLFRSCSGCLDLISWNSMISGYIKNGSADDARKLFDEMPQRD 376

Query: 69  IVSWNTILSAFRRTG 25
           + SW +++S + + G
Sbjct: 377 VYSWGSMISGYSQLG 391


>gb|EXB85809.1| hypothetical protein L484_009655 [Morus notabilis]
          Length = 879

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 23/47 (48%), Positives = 35/47 (74%)
 Frame = -1

Query: 165 DTTSWNLMLSGYATHGRPQCAHKMFDEMPRRDIVSWNTILSAFRRTG 25
           D+ SWN M+SGY+  G+ + A  +FD MPRRD+VSWN+++S + + G
Sbjct: 106 DSVSWNTMISGYSVRGKMEIAQSLFDAMPRRDVVSWNSLISGYLQNG 152


>ref|XP_006604760.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like isoform X2 [Glycine max]
          Length = 299

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 30/77 (38%), Positives = 44/77 (57%)
 Frame = -1

Query: 261 SSAQLNSVXXXXXXXXXLTNAVEAFRSNSHLTDTTSWNLMLSGYATHGRPQCAHKMFDEM 82
           +SA+LN +         + NA + F  N    +  SWN+M++GY  H + Q A  +FD+M
Sbjct: 23  TSAKLNYMIDAYIQGNNINNARKLFDENPSSRNLVSWNMMMTGYVKHHQIQYAQYLFDQM 82

Query: 81  PRRDIVSWNTILSAFRR 31
           P +D VSWN +LS F R
Sbjct: 83  PFKDTVSWNIMLSGFHR 99


>ref|XP_006604759.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like isoform X1 [Glycine max]
          Length = 531

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 30/77 (38%), Positives = 44/77 (57%)
 Frame = -1

Query: 261 SSAQLNSVXXXXXXXXXLTNAVEAFRSNSHLTDTTSWNLMLSGYATHGRPQCAHKMFDEM 82
           +SA+LN +         + NA + F  N    +  SWN+M++GY  H + Q A  +FD+M
Sbjct: 23  TSAKLNYMIDAYIQGNNINNARKLFDENPSSRNLVSWNMMMTGYVKHHQIQYAQYLFDQM 82

Query: 81  PRRDIVSWNTILSAFRR 31
           P +D VSWN +LS F R
Sbjct: 83  PFKDTVSWNIMLSGFHR 99


>ref|XP_006661209.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Oryza brachyantha]
          Length = 607

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 25/47 (53%), Positives = 33/47 (70%)
 Frame = -1

Query: 165 DTTSWNLMLSGYATHGRPQCAHKMFDEMPRRDIVSWNTILSAFRRTG 25
           D  +WN MLSGYA HG  + A K+FD MP RD+VSWN++L  + + G
Sbjct: 215 DVVTWNSMLSGYARHGDMKNARKIFDAMPERDVVSWNSMLDGYAQAG 261


>ref|XP_006591720.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g62890-like [Glycine max]
          Length = 353

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 25/60 (41%), Positives = 39/60 (65%)
 Frame = -1

Query: 204 NAVEAFRSNSHLTDTTSWNLMLSGYATHGRPQCAHKMFDEMPRRDIVSWNTILSAFRRTG 25
           +A   F  ++  +D  +WN ML+GY  +G  + A KMFDEMP RD+VSW+T+++ +   G
Sbjct: 119 SAKRVFEEDTLCSDVVTWNSMLAGYVRNGEVRFAEKMFDEMPERDVVSWSTMITGYVLNG 178


>ref|NP_001063138.1| Os09g0407800 [Oryza sativa Japonica Group]
           gi|51091508|dbj|BAD36246.1| pentatricopeptide (PPR)
           repeat-containing protein-like [Oryza sativa Japonica
           Group] gi|51091564|dbj|BAD36301.1| pentatricopeptide
           (PPR) repeat-containing protein-like [Oryza sativa
           Japonica Group] gi|113631371|dbj|BAF25052.1|
           Os09g0407800 [Oryza sativa Japonica Group]
           gi|215740507|dbj|BAG97163.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 612

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 24/47 (51%), Positives = 33/47 (70%)
 Frame = -1

Query: 165 DTTSWNLMLSGYATHGRPQCAHKMFDEMPRRDIVSWNTILSAFRRTG 25
           D  +WN M+SGY+ HG  + A KMFD MP RD+VSWN++L  + + G
Sbjct: 218 DVVTWNSMISGYSRHGDMENARKMFDAMPERDVVSWNSMLDGYAQAG 264


>gb|EAZ44684.1| hypothetical protein OsJ_29310 [Oryza sativa Japonica Group]
          Length = 612

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 24/47 (51%), Positives = 33/47 (70%)
 Frame = -1

Query: 165 DTTSWNLMLSGYATHGRPQCAHKMFDEMPRRDIVSWNTILSAFRRTG 25
           D  +WN M+SGY+ HG  + A KMFD MP RD+VSWN++L  + + G
Sbjct: 218 DVVTWNSMISGYSRHGDMENARKMFDAMPERDVVSWNSMLDGYAQAG 264


>emb|CBI36977.3| unnamed protein product [Vitis vinifera]
          Length = 372

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 32/91 (35%), Positives = 46/91 (50%)
 Frame = -1

Query: 291 PPLMSYVTLHSSAQLNSVXXXXXXXXXLTNAVEAFRSNSHLTDTTSWNLMLSGYATHGRP 112
           P +  ++   S+A LN +         L +A + F  N    +T  WN ++S Y  +  P
Sbjct: 9   PFISRHIYTLSTANLNRLINGYIRKGNLRDARKLFDQNPTSRNTVIWNTIISAYIQNDEP 68

Query: 111 QCAHKMFDEMPRRDIVSWNTILSAFRRTGRP 19
             A  +FDEMP RDIVSWNT LS  ++   P
Sbjct: 69  HNAQNLFDEMPDRDIVSWNTALSGLKKIKNP 99


>ref|XP_002521241.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539509|gb|EEF41097.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 662

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 22/47 (46%), Positives = 35/47 (74%)
 Frame = -1

Query: 165 DTTSWNLMLSGYATHGRPQCAHKMFDEMPRRDIVSWNTILSAFRRTG 25
           DT SWNLM+SGYA  G  + AH  F+ MP++++VSWN++++ + + G
Sbjct: 347 DTLSWNLMISGYAQSGSLELAHDFFERMPQKNLVSWNSVIAGYEKNG 393



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 25/56 (44%), Positives = 32/56 (57%)
 Frame = -1

Query: 204 NAVEAFRSNSHLTDTTSWNLMLSGYATHGRPQCAHKMFDEMPRRDIVSWNTILSAF 37
           N   A        +T +WN M+SGY   G    A K+FDEMP RD+VSWN I+S +
Sbjct: 64  NEARALFDKLERRNTVTWNSMISGYVKRGEMTKARKLFDEMPERDVVSWNLIISGY 119


>gb|EAZ09058.1| hypothetical protein OsI_31319 [Oryza sativa Indica Group]
          Length = 400

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 24/47 (51%), Positives = 33/47 (70%)
 Frame = -1

Query: 165 DTTSWNLMLSGYATHGRPQCAHKMFDEMPRRDIVSWNTILSAFRRTG 25
           D  +WN M+SGY+ HG  + A KMFD MP RD+VSWN++L  + + G
Sbjct: 218 DVVTWNSMISGYSRHGDMENARKMFDAMPERDVVSWNSMLDGYAQGG 264


>gb|ESW35233.1| hypothetical protein PHAVU_001G217700g [Phaseolus vulgaris]
          Length = 561

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 28/77 (36%), Positives = 44/77 (57%)
 Frame = -1

Query: 261 SSAQLNSVXXXXXXXXXLTNAVEAFRSNSHLTDTTSWNLMLSGYATHGRPQCAHKMFDEM 82
           +SA+LN +         +  A + F  N    +  SWN+M++G+  H + + AH +FD+M
Sbjct: 55  TSAKLNYMIDAHIQDNNINQARKLFDDNPSSRNLVSWNMMMTGHVKHYQIEHAHNLFDQM 114

Query: 81  PRRDIVSWNTILSAFRR 31
           P +D VSWN +LS F R
Sbjct: 115 PLKDTVSWNIMLSGFSR 131


>gb|EPS64899.1| hypothetical protein M569_09880, partial [Genlisea aurea]
          Length = 455

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 27/61 (44%), Positives = 36/61 (59%)
 Frame = -1

Query: 201 AVEAFRSNSHLTDTTSWNLMLSGYATHGRPQCAHKMFDEMPRRDIVSWNTILSAFRRTGR 22
           A + F  + H  +  SWN +++GY        A K+FDEMP RD+VSWNT+LS FR    
Sbjct: 13  ARKLFDDDPHSRNIVSWNSLMNGYVKRNEISKAQKLFDEMPLRDVVSWNTMLSGFRDIRS 72

Query: 21  P 19
           P
Sbjct: 73  P 73


>gb|EOX93361.1| Tetratricopeptide repeat-like superfamily protein, putative
           [Theobroma cacao]
          Length = 747

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 28/59 (47%), Positives = 36/59 (61%)
 Frame = -1

Query: 201 AVEAFRSNSHLTDTTSWNLMLSGYATHGRPQCAHKMFDEMPRRDIVSWNTILSAFRRTG 25
           A E F S  H  D   WN+M+ GY   GR   A ++FDEMP R++VSWN +LS + R G
Sbjct: 127 ARELFDSLPHKRDVACWNVMIGGYGKKGRFIEAKRLFDEMPVRNVVSWNLMLSGYTRNG 185


>ref|XP_004306131.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15300-like [Fragaria vesca subsp. vesca]
          Length = 540

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 22/47 (46%), Positives = 34/47 (72%)
 Frame = -1

Query: 165 DTTSWNLMLSGYATHGRPQCAHKMFDEMPRRDIVSWNTILSAFRRTG 25
           D  SWN+M++GY   G  + A K+FDE+PRRD+V+WN +++ + R G
Sbjct: 209 DLVSWNVMITGYTKQGEMESARKLFDEVPRRDVVTWNAMIAGYVRCG 255


>ref|XP_004148898.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
           mitochondrial-like [Cucumis sativus]
          Length = 675

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 31/82 (37%), Positives = 47/82 (57%)
 Frame = -1

Query: 249 LNSVXXXXXXXXXLTNAVEAFRSNSHLTDTTSWNLMLSGYATHGRPQCAHKMFDEMPRRD 70
           LN++         LT A E F +N    D  SW  +L+GYA +G    A K+FDEMP R+
Sbjct: 291 LNAMLDMYVKCGCLTTAREIF-NNMERRDVFSWTSLLNGYAKNGDLGSARKLFDEMPERN 349

Query: 69  IVSWNTILSAFRRTGRPLLAFQ 4
           IVSWN +++ + +  +P+ A +
Sbjct: 350 IVSWNAMIAGYSQNSQPMEALE 371